RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 CADPS2Q86UW7 1296 aa27.86■■■□□ 2.05
BCAS4-204ENST00000463943 DCCP43146 1447 aa27.86■■■□□ 2.05
BCAS4-204ENST00000463943 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
BCAS4-204ENST00000463943 SLAIN2Q9P270 581 aa27.83■■■□□ 2.05
BCAS4-204ENST00000463943 POGKQ9P215 609 aa27.83■■■□□ 2.04
BCAS4-204ENST00000463943 ARHGEF28Q8N1W1 1705 aaKnown RBP27.82■■■□□ 2.04
BCAS4-204ENST00000463943 ROCK2O75116 1388 aaKnown RBP27.82■■■□□ 2.04
BCAS4-204ENST00000463943 ROBO1Q9Y6N7 1651 aa27.79■■■□□ 2.04
BCAS4-204ENST00000463943 MST1RQ04912 1400 aa27.78■■■□□ 2.04
BCAS4-204ENST00000463943 CDC42BPGQ6DT37 1551 aa27.77■■■□□ 2.04
BCAS4-204ENST00000463943 TIMELESSQ9UNS1 1208 aa27.76■■■□□ 2.04
BCAS4-204ENST00000463943 RALGAPBQ86X10 1494 aa27.75■■■□□ 2.03
BCAS4-204ENST00000463943 MINK1Q8N4C8 1332 aaPredicted RBP27.73■■■□□ 2.03
BCAS4-204ENST00000463943 HIRIP3Q9BW71 556 aaPredicted RBP27.73■■■□□ 2.03
BCAS4-204ENST00000463943 HSPA1LP34931 641 aa27.72■■■□□ 2.03
BCAS4-204ENST00000463943 GPRASP1Q5JY77 1395 aa27.72■■■□□ 2.03
BCAS4-204ENST00000463943 NUTM2FA1L443 756 aa27.71■■■□□ 2.03
BCAS4-204ENST00000463943 C1orf167Q5SNV9 1468 aa27.71■■■□□ 2.03
BCAS4-204ENST00000463943 CARD11Q9BXL7 1154 aa27.7■■■□□ 2.03
BCAS4-204ENST00000463943 ADGRB2O60241 1585 aa27.69■■■□□ 2.02
BCAS4-204ENST00000463943 BRINP3Q76B58 766 aa27.69■■■□□ 2.02
BCAS4-204ENST00000463943 FMN2Q9NZ56 1722 aa27.68■■■□□ 2.02
BCAS4-204ENST00000463943 CENPJQ9HC77 1338 aaPredicted RBP27.67■■■□□ 2.02
BCAS4-204ENST00000463943 ORAI2Q96SN7 254 aa27.65■■■□□ 2.02
BCAS4-204ENST00000463943 QRICH2Q9H0J4 1663 aa27.64■■■□□ 2.02
BCAS4-204ENST00000463943 EIF3AQ14152 1382 aaKnown RBP27.61■■■□□ 2.01
BCAS4-204ENST00000463943 WASLO00401 505 aaPredicted RBP27.61■■■□□ 2.01
BCAS4-204ENST00000463943 ESCO1Q5FWF5 840 aa27.61■■■□□ 2.01
BCAS4-204ENST00000463943 PHLPP1O60346 1717 aa27.6■■■□□ 2.01
BCAS4-204ENST00000463943 RGPD8O14715 1765 aaPredicted RBP27.6■■■□□ 2.01
BCAS4-204ENST00000463943 DDX17Q92841 729 aaKnown RBP27.59■■■□□ 2.01
BCAS4-204ENST00000463943 AHDC1Q5TGY3 1603 aaPredicted RBP27.58■■■□□ 2.01
BCAS4-204ENST00000463943 USP32Q8NFA0 1604 aa27.58■■■□□ 2.01
BCAS4-204ENST00000463943 NHSL1Q5SYE7 1610 aa27.56■■■□□ 2
BCAS4-204ENST00000463943 TULP4Q9NRJ4 1543 aa27.56■■■□□ 2
BCAS4-204ENST00000463943 CDK19Q9BWU1 502 aa27.55■■■□□ 2
BCAS4-204ENST00000463943 COL16A1Q07092 1604 aaPredicted RBP27.54■■■□□ 2
BCAS4-204ENST00000463943 ANKARQ7Z5J8 1434 aa27.54■■■□□ 2
BCAS4-204ENST00000463943 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
BCAS4-204ENST00000463943 ATP7BP35670 1465 aa27.5■■□□□ 1.99
BCAS4-204ENST00000463943 FOXO3O43524 673 aa27.5■■□□□ 1.99
BCAS4-204ENST00000463943 PHF8Q9UPP1 1060 aa27.49■■□□□ 1.99
BCAS4-204ENST00000463943 USP47Q96K76 1375 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 KIF1AQ12756 1690 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 SRPK2P78362 688 aaKnown RBP27.48■■□□□ 1.99
BCAS4-204ENST00000463943 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 NUDT16Q96DE0 195 aaKnown RBP27.48■■□□□ 1.99
BCAS4-204ENST00000463943 CABP2Q9NPB3 220 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 ST20-MTHFSA0A0A6YYL1 179 aa27.47■■□□□ 1.99
BCAS4-204ENST00000463943 XPCQ01831 940 aaPredicted RBP27.46■■□□□ 1.99
BCAS4-204ENST00000463943 NPHP3Q7Z494 1330 aa27.46■■□□□ 1.99
BCAS4-204ENST00000463943 EVC2Q86UK5 1308 aa27.46■■□□□ 1.99
BCAS4-204ENST00000463943 SBNO2Q9Y2G9 1366 aa27.45■■□□□ 1.99
BCAS4-204ENST00000463943 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
BCAS4-204ENST00000463943 SOS2Q07890 1332 aaPredicted RBP27.43■■□□□ 1.98
BCAS4-204ENST00000463943 TOPAZ1Q8N9V7 1692 aa27.42■■□□□ 1.98
BCAS4-204ENST00000463943 PXDNQ92626 1479 aa27.41■■□□□ 1.98
BCAS4-204ENST00000463943 TESK2Q96S53 571 aa27.41■■□□□ 1.98
BCAS4-204ENST00000463943 JCADQ9P266 1359 aa27.4■■□□□ 1.98
BCAS4-204ENST00000463943 LRRC59Q96AG4 307 aaKnown RBP27.4■■□□□ 1.98
BCAS4-204ENST00000463943 CCDC61Q9Y6R9 512 aa27.4■■□□□ 1.98
BCAS4-204ENST00000463943 PPIP5K1Q6PFW1 1433 aa27.37■■□□□ 1.97
BCAS4-204ENST00000463943 KRT28Q7Z3Y7 464 aa27.37■■□□□ 1.97
BCAS4-204ENST00000463943 NGDNQ8NEJ9 315 aaKnown RBP27.37■■□□□ 1.97
BCAS4-204ENST00000463943 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
BCAS4-204ENST00000463943 PSME1Q06323 249 aa27.36■■□□□ 1.97
BCAS4-204ENST00000463943 PNPLA6Q8IY17 1366 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 CABP1Q9NZU7 370 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 ACEP12821 1306 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 PLEKHG3A1L390 1219 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 POLR3AO14802 1390 aaPredicted RBP27.3■■□□□ 1.96
BCAS4-204ENST00000463943 ATAD2Q6PL18 1390 aa27.3■■□□□ 1.96
BCAS4-204ENST00000463943 DISP3Q9P2K9 1392 aa27.3■■□□□ 1.96
BCAS4-204ENST00000463943 EIF4G2P78344 907 aaKnown RBP eCLIP27.3■■□□□ 1.96
BCAS4-204ENST00000463943 MED1Q15648 1581 aaPredicted RBP27.3■■□□□ 1.96
BCAS4-204ENST00000463943 SPATA31A3Q5VYP0 1347 aa27.28■■□□□ 1.96
BCAS4-204ENST00000463943 HSPA5P11021 654 aaKnown RBP27.28■■□□□ 1.96
BCAS4-204ENST00000463943 TRPM3Q9HCF6 1732 aaPredicted RBP27.28■■□□□ 1.96
BCAS4-204ENST00000463943 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
BCAS4-204ENST00000463943 TMF1P82094 1093 aa27.27■■□□□ 1.96
BCAS4-204ENST00000463943 TNS3Q68CZ2 1445 aa27.27■■□□□ 1.96
BCAS4-204ENST00000463943 SLC24A1O60721 1099 aa27.26■■□□□ 1.95
BCAS4-204ENST00000463943 SBNO1A3KN83 1393 aa27.25■■□□□ 1.95
BCAS4-204ENST00000463943 LRP6O75581 1613 aa27.25■■□□□ 1.95
BCAS4-204ENST00000463943 NUTM2BA6NNL0 878 aaPredicted RBP27.25■■□□□ 1.95
BCAS4-204ENST00000463943 NUTM2EB1AL46 878 aaPredicted RBP27.25■■□□□ 1.95
BCAS4-204ENST00000463943 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
BCAS4-204ENST00000463943 NUTM2AQ8IVF1 878 aaPredicted RBP27.25■■□□□ 1.95
BCAS4-204ENST00000463943 PAK3O75914 559 aaPredicted RBP27.24■■□□□ 1.95
BCAS4-204ENST00000463943 COL22A1Q8NFW1 1626 aaPredicted RBP27.23■■□□□ 1.95
BCAS4-204ENST00000463943 TMC1Q8TDI8 760 aa27.23■■□□□ 1.95
BCAS4-204ENST00000463943 PUS7Q96PZ0 661 aaKnown RBP27.21■■□□□ 1.95
BCAS4-204ENST00000463943 PLEKHG5O94827 1062 aa27.2■■□□□ 1.95
BCAS4-204ENST00000463943 ALS2Q96Q42 1657 aa27.2■■□□□ 1.94
BCAS4-204ENST00000463943 SLC12A5Q9H2X9 1139 aa27.19■■□□□ 1.94
BCAS4-204ENST00000463943 ARHGEF10O15013 1369 aa27.18■■□□□ 1.94
BCAS4-204ENST00000463943 USP6P35125 1406 aa27.18■■□□□ 1.94
BCAS4-204ENST00000463943 AKAP12Q02952 1782 aa27.18■■□□□ 1.94
BCAS4-204ENST00000463943 CPSF1Q10570 1443 aaKnown RBP27.16■■□□□ 1.94
BCAS4-204ENST00000463943 CD163L1Q9NR16 1453 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms