RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 CADPS2Q86UW7 1296 aa27.86■■■□□ 2.05
BCAS4-204ENST00000463943 DCCP43146 1447 aa27.86■■■□□ 2.05
BCAS4-204ENST00000463943 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
BCAS4-204ENST00000463943 SLAIN2Q9P270 581 aa27.83■■■□□ 2.05
BCAS4-204ENST00000463943 POGKQ9P215 609 aa27.83■■■□□ 2.04
BCAS4-204ENST00000463943 ARHGEF28Q8N1W1 1705 aaKnown RBP27.82■■■□□ 2.04
BCAS4-204ENST00000463943 ROCK2O75116 1388 aaKnown RBP27.82■■■□□ 2.04
BCAS4-204ENST00000463943 ROBO1Q9Y6N7 1651 aa27.79■■■□□ 2.04
BCAS4-204ENST00000463943 MST1RQ04912 1400 aa27.78■■■□□ 2.04
BCAS4-204ENST00000463943 CDC42BPGQ6DT37 1551 aa27.77■■■□□ 2.04
BCAS4-204ENST00000463943 TIMELESSQ9UNS1 1208 aa27.76■■■□□ 2.04
BCAS4-204ENST00000463943 RALGAPBQ86X10 1494 aa27.75■■■□□ 2.03
BCAS4-204ENST00000463943 MINK1Q8N4C8 1332 aaPredicted RBP27.73■■■□□ 2.03
BCAS4-204ENST00000463943 HIRIP3Q9BW71 556 aaPredicted RBP27.73■■■□□ 2.03
BCAS4-204ENST00000463943 HSPA1LP34931 641 aa27.72■■■□□ 2.03
BCAS4-204ENST00000463943 GPRASP1Q5JY77 1395 aa27.72■■■□□ 2.03
BCAS4-204ENST00000463943 NUTM2FA1L443 756 aa27.71■■■□□ 2.03
BCAS4-204ENST00000463943 C1orf167Q5SNV9 1468 aa27.71■■■□□ 2.03
BCAS4-204ENST00000463943 CARD11Q9BXL7 1154 aa27.7■■■□□ 2.03
BCAS4-204ENST00000463943 ADGRB2O60241 1585 aa27.69■■■□□ 2.02
BCAS4-204ENST00000463943 BRINP3Q76B58 766 aa27.69■■■□□ 2.02
BCAS4-204ENST00000463943 FMN2Q9NZ56 1722 aa27.68■■■□□ 2.02
BCAS4-204ENST00000463943 CENPJQ9HC77 1338 aaPredicted RBP27.67■■■□□ 2.02
BCAS4-204ENST00000463943 ORAI2Q96SN7 254 aa27.65■■■□□ 2.02
BCAS4-204ENST00000463943 QRICH2Q9H0J4 1663 aa27.64■■■□□ 2.02
BCAS4-204ENST00000463943 EIF3AQ14152 1382 aaKnown RBP27.61■■■□□ 2.01
BCAS4-204ENST00000463943 WASLO00401 505 aaPredicted RBP27.61■■■□□ 2.01
BCAS4-204ENST00000463943 ESCO1Q5FWF5 840 aa27.61■■■□□ 2.01
BCAS4-204ENST00000463943 PHLPP1O60346 1717 aa27.6■■■□□ 2.01
BCAS4-204ENST00000463943 RGPD8O14715 1765 aaPredicted RBP27.6■■■□□ 2.01
BCAS4-204ENST00000463943 DDX17Q92841 729 aaKnown RBP27.59■■■□□ 2.01
BCAS4-204ENST00000463943 AHDC1Q5TGY3 1603 aaPredicted RBP27.58■■■□□ 2.01
BCAS4-204ENST00000463943 USP32Q8NFA0 1604 aa27.58■■■□□ 2.01
BCAS4-204ENST00000463943 NHSL1Q5SYE7 1610 aa27.56■■■□□ 2
BCAS4-204ENST00000463943 TULP4Q9NRJ4 1543 aa27.56■■■□□ 2
BCAS4-204ENST00000463943 CDK19Q9BWU1 502 aa27.55■■■□□ 2
BCAS4-204ENST00000463943 COL16A1Q07092 1604 aaPredicted RBP27.54■■■□□ 2
BCAS4-204ENST00000463943 ANKARQ7Z5J8 1434 aa27.54■■■□□ 2
BCAS4-204ENST00000463943 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
BCAS4-204ENST00000463943 ATP7BP35670 1465 aa27.5■■□□□ 1.99
BCAS4-204ENST00000463943 FOXO3O43524 673 aa27.5■■□□□ 1.99
BCAS4-204ENST00000463943 PHF8Q9UPP1 1060 aa27.49■■□□□ 1.99
BCAS4-204ENST00000463943 USP47Q96K76 1375 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 KIF1AQ12756 1690 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 SRPK2P78362 688 aaKnown RBP27.48■■□□□ 1.99
BCAS4-204ENST00000463943 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 NUDT16Q96DE0 195 aaKnown RBP27.48■■□□□ 1.99
BCAS4-204ENST00000463943 CABP2Q9NPB3 220 aa27.48■■□□□ 1.99
BCAS4-204ENST00000463943 ST20-MTHFSA0A0A6YYL1 179 aa27.47■■□□□ 1.99
BCAS4-204ENST00000463943 XPCQ01831 940 aaPredicted RBP27.46■■□□□ 1.99
BCAS4-204ENST00000463943 NPHP3Q7Z494 1330 aa27.46■■□□□ 1.99
BCAS4-204ENST00000463943 EVC2Q86UK5 1308 aa27.46■■□□□ 1.99
BCAS4-204ENST00000463943 SBNO2Q9Y2G9 1366 aa27.45■■□□□ 1.99
BCAS4-204ENST00000463943 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
BCAS4-204ENST00000463943 SOS2Q07890 1332 aaPredicted RBP27.43■■□□□ 1.98
BCAS4-204ENST00000463943 TOPAZ1Q8N9V7 1692 aa27.42■■□□□ 1.98
BCAS4-204ENST00000463943 PXDNQ92626 1479 aa27.41■■□□□ 1.98
BCAS4-204ENST00000463943 TESK2Q96S53 571 aa27.41■■□□□ 1.98
BCAS4-204ENST00000463943 JCADQ9P266 1359 aa27.4■■□□□ 1.98
BCAS4-204ENST00000463943 LRRC59Q96AG4 307 aaKnown RBP27.4■■□□□ 1.98
BCAS4-204ENST00000463943 CCDC61Q9Y6R9 512 aa27.4■■□□□ 1.98
BCAS4-204ENST00000463943 PPIP5K1Q6PFW1 1433 aa27.37■■□□□ 1.97
BCAS4-204ENST00000463943 KRT28Q7Z3Y7 464 aa27.37■■□□□ 1.97
BCAS4-204ENST00000463943 NGDNQ8NEJ9 315 aaKnown RBP27.37■■□□□ 1.97
BCAS4-204ENST00000463943 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
BCAS4-204ENST00000463943 PSME1Q06323 249 aa27.36■■□□□ 1.97
BCAS4-204ENST00000463943 PNPLA6Q8IY17 1366 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 CABP1Q9NZU7 370 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 ACEP12821 1306 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 PLEKHG3A1L390 1219 aa27.32■■□□□ 1.96
BCAS4-204ENST00000463943 POLR3AO14802 1390 aaPredicted RBP27.3■■□□□ 1.96
BCAS4-204ENST00000463943 ATAD2Q6PL18 1390 aa27.3■■□□□ 1.96
BCAS4-204ENST00000463943 DISP3Q9P2K9 1392 aa27.3■■□□□ 1.96
BCAS4-204ENST00000463943 EIF4G2P78344 907 aaKnown RBP eCLIP27.3■■□□□ 1.96
BCAS4-204ENST00000463943 MED1Q15648 1581 aaPredicted RBP27.3■■□□□ 1.96
BCAS4-204ENST00000463943 SPATA31A3Q5VYP0 1347 aa27.28■■□□□ 1.96
BCAS4-204ENST00000463943 HSPA5P11021 654 aaKnown RBP27.28■■□□□ 1.96
BCAS4-204ENST00000463943 TRPM3Q9HCF6 1732 aaPredicted RBP27.28■■□□□ 1.96
BCAS4-204ENST00000463943 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
BCAS4-204ENST00000463943 TMF1P82094 1093 aa27.27■■□□□ 1.96
BCAS4-204ENST00000463943 TNS3Q68CZ2 1445 aa27.27■■□□□ 1.96
BCAS4-204ENST00000463943 SLC24A1O60721 1099 aa27.26■■□□□ 1.95
BCAS4-204ENST00000463943 SBNO1A3KN83 1393 aa27.25■■□□□ 1.95
BCAS4-204ENST00000463943 LRP6O75581 1613 aa27.25■■□□□ 1.95
BCAS4-204ENST00000463943 NUTM2BA6NNL0 878 aaPredicted RBP27.25■■□□□ 1.95
BCAS4-204ENST00000463943 NUTM2EB1AL46 878 aaPredicted RBP27.25■■□□□ 1.95
BCAS4-204ENST00000463943 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
BCAS4-204ENST00000463943 NUTM2AQ8IVF1 878 aaPredicted RBP27.25■■□□□ 1.95
BCAS4-204ENST00000463943 PAK3O75914 559 aaPredicted RBP27.24■■□□□ 1.95
BCAS4-204ENST00000463943 COL22A1Q8NFW1 1626 aaPredicted RBP27.23■■□□□ 1.95
BCAS4-204ENST00000463943 TMC1Q8TDI8 760 aa27.23■■□□□ 1.95
BCAS4-204ENST00000463943 PUS7Q96PZ0 661 aaKnown RBP27.21■■□□□ 1.95
BCAS4-204ENST00000463943 PLEKHG5O94827 1062 aa27.2■■□□□ 1.95
BCAS4-204ENST00000463943 ALS2Q96Q42 1657 aa27.2■■□□□ 1.94
BCAS4-204ENST00000463943 SLC12A5Q9H2X9 1139 aa27.19■■□□□ 1.94
BCAS4-204ENST00000463943 ARHGEF10O15013 1369 aa27.18■■□□□ 1.94
BCAS4-204ENST00000463943 USP6P35125 1406 aa27.18■■□□□ 1.94
BCAS4-204ENST00000463943 AKAP12Q02952 1782 aa27.18■■□□□ 1.94
BCAS4-204ENST00000463943 CPSF1Q10570 1443 aaKnown RBP27.16■■□□□ 1.94
BCAS4-204ENST00000463943 CD163L1Q9NR16 1453 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms