RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 ADAMTS2O95450 1211 aa26.07■■□□□ 1.76
HMGN1-209ENST00000463631 IFT172Q9UG01 1749 aa26.07■■□□□ 1.76
HMGN1-209ENST00000463631 PXDNQ92626 1479 aa26.06■■□□□ 1.76
HMGN1-209ENST00000463631 FNBP4Q8N3X1 1017 aaPredicted RBP26.04■■□□□ 1.76
HMGN1-209ENST00000463631 KNDC1Q76NI1 1749 aa26.04■■□□□ 1.76
HMGN1-209ENST00000463631 SPATA31E1Q6ZUB1 1445 aa26.04■■□□□ 1.76
HMGN1-209ENST00000463631 MARF1Q9Y4F3 1742 aaKnown RBP26.03■■□□□ 1.76
HMGN1-209ENST00000463631 NPHP3Q7Z494 1330 aa26.03■■□□□ 1.76
HMGN1-209ENST00000463631 CCDC144AA2RUR9 1427 aa26.02■■□□□ 1.76
HMGN1-209ENST00000463631 ATRNO75882 1429 aa26.02■■□□□ 1.76
HMGN1-209ENST00000463631 ATAD2Q6PL18 1390 aa26.01■■□□□ 1.75
HMGN1-209ENST00000463631 USP21Q9UK80 565 aa26.01■■□□□ 1.75
HMGN1-209ENST00000463631 ANKRD30BQ9BXX2 1392 aa26■■□□□ 1.75
HMGN1-209ENST00000463631 TRPC5Q9UL62 973 aaPredicted RBP26■■□□□ 1.75
HMGN1-209ENST00000463631 LRPPRCP42704 1394 aaKnown RBP25.98■■□□□ 1.75
HMGN1-209ENST00000463631 ADGRF5Q8IZF2 1346 aa25.97■■□□□ 1.75
HMGN1-209ENST00000463631 FMN2Q9NZ56 1722 aa25.97■■□□□ 1.75
HMGN1-209ENST00000463631 PIK3C2GO75747 1445 aa25.97■■□□□ 1.75
HMGN1-209ENST00000463631 ABCC11Q96J66 1382 aa25.96■■□□□ 1.75
HMGN1-209ENST00000463631 ESCO1Q5FWF5 840 aa25.96■■□□□ 1.75
HMGN1-209ENST00000463631 EP400Q96L91 3159 aa25.95■■□□□ 1.75
HMGN1-209ENST00000463631 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.95■■□□□ 1.74
HMGN1-209ENST00000463631 BCL9LQ86UU0 1499 aa25.95■■□□□ 1.74
HMGN1-209ENST00000463631 KIF1AQ12756 1690 aa25.95■■□□□ 1.74
HMGN1-209ENST00000463631 FOXD1Q16676 465 aa25.94■■□□□ 1.74
HMGN1-209ENST00000463631 SRCAPQ6ZRS2 3230 aa25.92■■□□□ 1.74
HMGN1-209ENST00000463631 FOXO3O43524 673 aa25.91■■□□□ 1.74
HMGN1-209ENST00000463631 PLEKHH1Q9ULM0 1364 aa25.89■■□□□ 1.74
HMGN1-209ENST00000463631 YTHDC2Q9H6S0 1430 aaKnown RBP25.88■■□□□ 1.73
HMGN1-209ENST00000463631 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
HMGN1-209ENST00000463631 RGL3Q3MIN7 710 aa25.87■■□□□ 1.73
HMGN1-209ENST00000463631 STK26Q9P289 416 aa25.87■■□□□ 1.73
HMGN1-209ENST00000463631 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
HMGN1-209ENST00000463631 XPCQ01831 940 aaPredicted RBP25.86■■□□□ 1.73
HMGN1-209ENST00000463631 MPHOSPH9Q99550 1183 aa25.86■■□□□ 1.73
HMGN1-209ENST00000463631 USP32Q8NFA0 1604 aa25.85■■□□□ 1.73
HMGN1-209ENST00000463631 SLIT2O94813 1529 aa25.85■■□□□ 1.73
HMGN1-209ENST00000463631 SPATA31A3Q5VYP0 1347 aa25.84■■□□□ 1.73
HMGN1-209ENST00000463631 TMEM132EQ6IEE7 984 aa25.83■■□□□ 1.73
HMGN1-209ENST00000463631 SIRT1Q96EB6 747 aa25.83■■□□□ 1.73
HMGN1-209ENST00000463631 GJD4Q96KN9 370 aaPredicted RBP25.82■■□□□ 1.72
HMGN1-209ENST00000463631 GLI3P10071 1580 aa25.82■■□□□ 1.72
HMGN1-209ENST00000463631 NUTM2FA1L443 756 aa25.81■■□□□ 1.72
HMGN1-209ENST00000463631 CCDC125Q86Z20 511 aa25.8■■□□□ 1.72
HMGN1-209ENST00000463631 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
HMGN1-209ENST00000463631 RALGAPBQ86X10 1494 aa25.79■■□□□ 1.72
HMGN1-209ENST00000463631 TNS3Q68CZ2 1445 aa25.79■■□□□ 1.72
HMGN1-209ENST00000463631 RGPD8O14715 1765 aaPredicted RBP25.78■■□□□ 1.72
HMGN1-209ENST00000463631 C14orf93Q9H972 538 aaKnown RBP25.78■■□□□ 1.72
HMGN1-209ENST00000463631 ABCA3Q99758 1704 aa25.77■■□□□ 1.72
HMGN1-209ENST00000463631 UNC5CLQ8IV45 518 aa25.77■■□□□ 1.72
HMGN1-209ENST00000463631 NWD2Q9ULI1 1742 aa25.76■■□□□ 1.71
HMGN1-209ENST00000463631 DLC1Q96QB1 1528 aa25.75■■□□□ 1.71
HMGN1-209ENST00000463631 PLCH1Q4KWH8 1693 aa25.74■■□□□ 1.71
HMGN1-209ENST00000463631 ADGRB2O60241 1585 aa25.74■■□□□ 1.71
HMGN1-209ENST00000463631 KRT28Q7Z3Y7 464 aa25.74■■□□□ 1.71
HMGN1-209ENST00000463631 SBNO1A3KN83 1393 aa25.73■■□□□ 1.71
HMGN1-209ENST00000463631 DHX57Q6P158 1386 aaKnown RBP25.73■■□□□ 1.71
HMGN1-209ENST00000463631 ZRANB1Q9UGI0 708 aa25.73■■□□□ 1.71
HMGN1-209ENST00000463631 PHF8Q9UPP1 1060 aa25.72■■□□□ 1.71
HMGN1-209ENST00000463631 BRWD3Q6RI45 1802 aa25.71■■□□□ 1.71
HMGN1-209ENST00000463631 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
HMGN1-209ENST00000463631 ANKARQ7Z5J8 1434 aa25.71■■□□□ 1.71
HMGN1-209ENST00000463631 ARHGEF10O15013 1369 aa25.69■■□□□ 1.7
HMGN1-209ENST00000463631 PSME1Q06323 249 aa25.69■■□□□ 1.7
HMGN1-209ENST00000463631 ADGRB1O14514 1584 aa25.69■■□□□ 1.7
HMGN1-209ENST00000463631 CFAP70Q5T0N1 1121 aa25.68■■□□□ 1.7
HMGN1-209ENST00000463631 VPS72Q15906 364 aa25.66■■□□□ 1.7
HMGN1-209ENST00000463631 PRAM1Q96QH2 718 aa25.66■■□□□ 1.7
HMGN1-209ENST00000463631 TRPM3Q9HCF6 1732 aaPredicted RBP25.66■■□□□ 1.7
HMGN1-209ENST00000463631 HAP1P54257 671 aaPredicted RBP25.63■■□□□ 1.69
HMGN1-209ENST00000463631 NRAPQ86VF7 1730 aa25.63■■□□□ 1.69
HMGN1-209ENST00000463631 ALS2Q96Q42 1657 aa25.62■■□□□ 1.69
HMGN1-209ENST00000463631 ONECUT3O60422 494 aaPredicted RBP25.62■■□□□ 1.69
HMGN1-209ENST00000463631 CABLES1Q8TDN4 633 aa25.62■■□□□ 1.69
HMGN1-209ENST00000463631 SEPT12Q8IYM1 358 aa25.6■■□□□ 1.69
HMGN1-209ENST00000463631 EIF3AQ14152 1382 aaKnown RBP25.59■■□□□ 1.69
HMGN1-209ENST00000463631 SAFB2Q14151 953 aaKnown RBP eCLIP25.59■■□□□ 1.69
HMGN1-209ENST00000463631 TULP4Q9NRJ4 1543 aa25.58■■□□□ 1.69
HMGN1-209ENST00000463631 POGKQ9P215 609 aa25.57■■□□□ 1.68
HMGN1-209ENST00000463631 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
HMGN1-209ENST00000463631 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
HMGN1-209ENST00000463631 COL14A1Q05707 1796 aaKnown RBP25.56■■□□□ 1.68
HMGN1-209ENST00000463631 LMOD2Q6P5Q4 547 aa25.54■■□□□ 1.68
HMGN1-209ENST00000463631 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
HMGN1-209ENST00000463631 KRT27Q7Z3Y8 459 aa25.53■■□□□ 1.68
HMGN1-209ENST00000463631 FAM83GA6ND36 823 aa25.52■■□□□ 1.68
HMGN1-209ENST00000463631 GPRASP1Q5JY77 1395 aa25.52■■□□□ 1.68
HMGN1-209ENST00000463631 LRP5O75197 1615 aa25.52■■□□□ 1.68
HMGN1-209ENST00000463631 SF3B2Q13435 895 aaKnown RBP25.51■■□□□ 1.67
HMGN1-209ENST00000463631 DEFB132Q7Z7B7 95 aa25.51■■□□□ 1.67
HMGN1-209ENST00000463631 CCDC9Q9Y3X0 531 aaKnown RBP25.51■■□□□ 1.67
HMGN1-209ENST00000463631 PRR36Q9H6K5 1346 aa25.51■■□□□ 1.67
HMGN1-209ENST00000463631 ITSN1Q15811 1721 aa25.5■■□□□ 1.67
HMGN1-209ENST00000463631 ARHGEF28Q8N1W1 1705 aaKnown RBP25.49■■□□□ 1.67
HMGN1-209ENST00000463631 PLEKHG5O94827 1062 aa25.48■■□□□ 1.67
HMGN1-209ENST00000463631 STAC3Q96MF2 364 aa25.48■■□□□ 1.67
HMGN1-209ENST00000463631 HIRIP3Q9BW71 556 aaPredicted RBP25.48■■□□□ 1.67
HMGN1-209ENST00000463631 TRAK1Q9UPV9 953 aa25.48■■□□□ 1.67
HMGN1-209ENST00000463631 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms