RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 CFAP70Q5T0N1 1121 aa29.89■■■□□ 2.38
PRDM16-204ENST00000463591 ORAI2Q96SN7 254 aa29.89■■■□□ 2.38
PRDM16-204ENST00000463591 MEX3CQ5U5Q3 659 aaKnown RBP29.88■■■□□ 2.37
PRDM16-204ENST00000463591 POTEAQ6S8J7 498 aa29.88■■■□□ 2.37
PRDM16-204ENST00000463591 DDX17Q92841 729 aaKnown RBP29.87■■■□□ 2.37
PRDM16-204ENST00000463591 KNDC1Q76NI1 1749 aa29.87■■■□□ 2.37
PRDM16-204ENST00000463591 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
PRDM16-204ENST00000463591 LAMC1P11047 1609 aa29.85■■■□□ 2.37
PRDM16-204ENST00000463591 LRP6O75581 1613 aa29.84■■■□□ 2.37
PRDM16-204ENST00000463591 SOS2Q07890 1332 aaPredicted RBP29.83■■■□□ 2.37
PRDM16-204ENST00000463591 DCAF11Q8TEB1 546 aa29.83■■■□□ 2.37
PRDM16-204ENST00000463591 PLEKHH1Q9ULM0 1364 aa29.81■■■□□ 2.36
PRDM16-204ENST00000463591 NUTM2BA6NNL0 878 aaPredicted RBP29.81■■■□□ 2.36
PRDM16-204ENST00000463591 NUTM2EB1AL46 878 aaPredicted RBP29.81■■■□□ 2.36
PRDM16-204ENST00000463591 ESCO1Q5FWF5 840 aa29.81■■■□□ 2.36
PRDM16-204ENST00000463591 NUTM2AQ8IVF1 878 aaPredicted RBP29.81■■■□□ 2.36
PRDM16-204ENST00000463591 ZNF772Q68DY9 489 aaPredicted RBP29.8■■■□□ 2.36
PRDM16-204ENST00000463591 KDM2AQ9Y2K7 1162 aa29.8■■■□□ 2.36
PRDM16-204ENST00000463591 PNPLA6Q8IY17 1366 aa29.79■■■□□ 2.36
PRDM16-204ENST00000463591 NPHP3Q7Z494 1330 aa29.77■■■□□ 2.36
PRDM16-204ENST00000463591 NUTM2FA1L443 756 aa29.73■■■□□ 2.35
PRDM16-204ENST00000463591 PRAM1Q96QH2 718 aa29.73■■■□□ 2.35
PRDM16-204ENST00000463591 DLC1Q96QB1 1528 aa29.72■■■□□ 2.35
PRDM16-204ENST00000463591 POGKQ9P215 609 aa29.72■■■□□ 2.35
PRDM16-204ENST00000463591 FOXO3O43524 673 aa29.71■■■□□ 2.35
PRDM16-204ENST00000463591 ADGRB1O14514 1584 aa29.69■■■□□ 2.34
PRDM16-204ENST00000463591 FMN2Q9NZ56 1722 aa29.68■■■□□ 2.34
PRDM16-204ENST00000463591 TRAK1Q9UPV9 953 aa29.67■■■□□ 2.34
PRDM16-204ENST00000463591 SAFB2Q14151 953 aaKnown RBP eCLIP29.66■■■□□ 2.34
PRDM16-204ENST00000463591 AFF2P51816 1311 aa29.66■■■□□ 2.34
PRDM16-204ENST00000463591 PXDNQ92626 1479 aa29.64■■■□□ 2.34
PRDM16-204ENST00000463591 C8orf37Q96NL8 207 aa29.63■■■□□ 2.33
PRDM16-204ENST00000463591 RXRBP28702 533 aa29.61■■■□□ 2.33
PRDM16-204ENST00000463591 PHF8Q9UPP1 1060 aa29.61■■■□□ 2.33
PRDM16-204ENST00000463591 ADAMTS2O95450 1211 aa29.6■■■□□ 2.33
PRDM16-204ENST00000463591 NGLY1Q96IV0 654 aa29.6■■■□□ 2.33
PRDM16-204ENST00000463591 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
PRDM16-204ENST00000463591 XPCQ01831 940 aaPredicted RBP29.59■■■□□ 2.33
PRDM16-204ENST00000463591 COL22A1Q8NFW1 1626 aaPredicted RBP29.59■■■□□ 2.33
PRDM16-204ENST00000463591 KRT28Q7Z3Y7 464 aa29.58■■■□□ 2.33
PRDM16-204ENST00000463591 ANKARQ7Z5J8 1434 aa29.57■■■□□ 2.32
PRDM16-204ENST00000463591 PSME1Q06323 249 aa29.57■■■□□ 2.32
PRDM16-204ENST00000463591 SPATA31A3Q5VYP0 1347 aa29.55■■■□□ 2.32
PRDM16-204ENST00000463591 QTRT2Q9H974 415 aaKnown RBP29.55■■■□□ 2.32
PRDM16-204ENST00000463591 ADGRB2O60241 1585 aa29.55■■■□□ 2.32
PRDM16-204ENST00000463591 EIF3AQ14152 1382 aaKnown RBP29.54■■■□□ 2.32
PRDM16-204ENST00000463591 MINK1Q8N4C8 1332 aaPredicted RBP29.53■■■□□ 2.32
PRDM16-204ENST00000463591 HIRIP3Q9BW71 556 aaPredicted RBP29.52■■■□□ 2.32
PRDM16-204ENST00000463591 WASLO00401 505 aaPredicted RBP29.51■■■□□ 2.31
PRDM16-204ENST00000463591 FNBP4Q8N3X1 1017 aaPredicted RBP29.51■■■□□ 2.31
PRDM16-204ENST00000463591 CDK12Q9NYV4 1490 aaPredicted RBP29.5■■■□□ 2.31
PRDM16-204ENST00000463591 RGPD8O14715 1765 aaPredicted RBP29.5■■■□□ 2.31
PRDM16-204ENST00000463591 RBM6P78332 1123 aaKnown RBP29.5■■■□□ 2.31
PRDM16-204ENST00000463591 KIAA1210Q9ULL0 1709 aa29.48■■■□□ 2.31
PRDM16-204ENST00000463591 USP21Q9UK80 565 aa29.48■■■□□ 2.31
PRDM16-204ENST00000463591 PMFBP1Q8TBY8 1022 aa29.47■■■□□ 2.31
PRDM16-204ENST00000463591 SBNO1A3KN83 1393 aa29.47■■■□□ 2.31
PRDM16-204ENST00000463591 TRPC5Q9UL62 973 aaPredicted RBP29.45■■■□□ 2.31
PRDM16-204ENST00000463591 USP32Q8NFA0 1604 aa29.44■■■□□ 2.3
PRDM16-204ENST00000463591 TULP4Q9NRJ4 1543 aa29.44■■■□□ 2.3
PRDM16-204ENST00000463591 TNS3Q68CZ2 1445 aa29.44■■■□□ 2.3
PRDM16-204ENST00000463591 ARHGEF28Q8N1W1 1705 aaKnown RBP29.42■■■□□ 2.3
PRDM16-204ENST00000463591 NBPF1Q3BBV0 1214 aa29.42■■■□□ 2.3
PRDM16-204ENST00000463591 L3MBTL2Q969R5 705 aa29.42■■■□□ 2.3
PRDM16-204ENST00000463591 PRR36Q9H6K5 1346 aa29.42■■■□□ 2.3
PRDM16-204ENST00000463591 ARHGEF10O15013 1369 aa29.4■■■□□ 2.3
PRDM16-204ENST00000463591 SIN3AQ96ST3 1273 aa29.4■■■□□ 2.3
PRDM16-204ENST00000463591 GPRASP1Q5JY77 1395 aa29.39■■■□□ 2.3
PRDM16-204ENST00000463591 HAP1P54257 671 aaPredicted RBP29.37■■■□□ 2.29
PRDM16-204ENST00000463591 LMOD2Q6P5Q4 547 aa29.37■■■□□ 2.29
PRDM16-204ENST00000463591 NUDT16Q96DE0 195 aaKnown RBP29.37■■■□□ 2.29
PRDM16-204ENST00000463591 MARF1Q9Y4F3 1742 aaKnown RBP29.37■■■□□ 2.29
PRDM16-204ENST00000463591 NGDNQ8NEJ9 315 aaKnown RBP29.36■■■□□ 2.29
PRDM16-204ENST00000463591 CDK19Q9BWU1 502 aa29.36■■■□□ 2.29
PRDM16-204ENST00000463591 ATRNO75882 1429 aa29.36■■■□□ 2.29
PRDM16-204ENST00000463591 NEUROD1Q13562 356 aa29.35■■■□□ 2.29
PRDM16-204ENST00000463591 BCL9LQ86UU0 1499 aa29.35■■■□□ 2.29
PRDM16-204ENST00000463591 UPF1Q92900 1129 aaKnown RBP eCLIP29.33■■■□□ 2.29
PRDM16-204ENST00000463591 RGS12O14924 1447 aa29.32■■■□□ 2.28
PRDM16-204ENST00000463591 UNC5CLQ8IV45 518 aa29.31■■■□□ 2.28
PRDM16-204ENST00000463591 CABLES1Q8TDN4 633 aa29.31■■■□□ 2.28
PRDM16-204ENST00000463591 ATP7BP35670 1465 aa29.3■■■□□ 2.28
PRDM16-204ENST00000463591 CENPJQ9HC77 1338 aaPredicted RBP29.3■■■□□ 2.28
PRDM16-204ENST00000463591 TRIM26Q12899 539 aaPredicted RBP29.29■■■□□ 2.28
PRDM16-204ENST00000463591 CCDC61Q9Y6R9 512 aa29.29■■■□□ 2.28
PRDM16-204ENST00000463591 SLIT2O94813 1529 aa29.29■■■□□ 2.28
PRDM16-204ENST00000463591 GJD4Q96KN9 370 aaPredicted RBP29.28■■■□□ 2.28
PRDM16-204ENST00000463591 ITSN1Q15811 1721 aa29.27■■■□□ 2.28
PRDM16-204ENST00000463591 TRPM3Q9HCF6 1732 aaPredicted RBP29.27■■■□□ 2.28
PRDM16-204ENST00000463591 PLEKHG3A1L390 1219 aa29.25■■■□□ 2.27
PRDM16-204ENST00000463591 PAK3O75914 559 aaPredicted RBP29.24■■■□□ 2.27
PRDM16-204ENST00000463591 PLEKHG5O94827 1062 aa29.24■■■□□ 2.27
PRDM16-204ENST00000463591 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.23■■■□□ 2.27
PRDM16-204ENST00000463591 POLR3AO14802 1390 aaPredicted RBP29.23■■■□□ 2.27
PRDM16-204ENST00000463591 ALS2Q96Q42 1657 aa29.22■■■□□ 2.27
PRDM16-204ENST00000463591 SRPK2P78362 688 aaKnown RBP29.21■■■□□ 2.27
PRDM16-204ENST00000463591 NBPF8Q3BBV2 869 aa29.21■■■□□ 2.27
PRDM16-204ENST00000463591 ACEP12821 1306 aa29.2■■■□□ 2.27
PRDM16-204ENST00000463591 FAM83GA6ND36 823 aa29.2■■■□□ 2.26
PRDM16-204ENST00000463591 TRPM1Q7Z4N2 1603 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms