RNA–Protein interactions for RNA: ENST00000461804.5

CCNL1-203, Transcript of cyclin L1, humanhuman

TSL 2 BASIC

Gene CCNL1, Length 1,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-203ENST00000461804 NPC1L1Q9UHC9 1359 aa28.72■■■□□ 2.19
CCNL1-203ENST00000461804 SLIT1O75093 1534 aa28.7■■■□□ 2.18
CCNL1-203ENST00000461804 TXNDC2Q86VQ3 553 aa28.7■■■□□ 2.18
CCNL1-203ENST00000461804 ADAMTSL3P82987 1691 aa28.69■■■□□ 2.18
CCNL1-203ENST00000461804 PLEKHG1Q9ULL1 1385 aa28.69■■■□□ 2.18
CCNL1-203ENST00000461804 ADAMTS13Q76LX8 1427 aa28.69■■■□□ 2.18
CCNL1-203ENST00000461804 WAPLQ7Z5K2 1190 aa28.69■■■□□ 2.18
CCNL1-203ENST00000461804 ARHGAP23Q9P227 1491 aa28.69■■■□□ 2.18
CCNL1-203ENST00000461804 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
CCNL1-203ENST00000461804 SRPK2P78362 688 aaKnown RBP28.68■■■□□ 2.18
CCNL1-203ENST00000461804 EID1Q9Y6B2 187 aa28.66■■■□□ 2.18
CCNL1-203ENST00000461804 NSD3Q9BZ95 1437 aa28.66■■■□□ 2.18
CCNL1-203ENST00000461804 THEMISQ8N1K5 641 aaPredicted RBP28.64■■■□□ 2.18
CCNL1-203ENST00000461804 KNDC1Q76NI1 1749 aa28.64■■■□□ 2.18
CCNL1-203ENST00000461804 PPP2R1AP30153 589 aa28.64■■■□□ 2.17
CCNL1-203ENST00000461804 TECPR2O15040 1411 aa28.63■■■□□ 2.17
CCNL1-203ENST00000461804 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
CCNL1-203ENST00000461804 ZBED9Q6R2W3 1325 aa28.61■■■□□ 2.17
CCNL1-203ENST00000461804 ANKRD36BQ8N2N9 1353 aa28.61■■■□□ 2.17
CCNL1-203ENST00000461804 CDK19Q9BWU1 502 aa28.61■■■□□ 2.17
CCNL1-203ENST00000461804 ATAD2Q6PL18 1390 aa28.6■■■□□ 2.17
CCNL1-203ENST00000461804 CPS1P31327 1500 aa28.6■■■□□ 2.17
CCNL1-203ENST00000461804 MED14O60244 1454 aa28.59■■■□□ 2.17
CCNL1-203ENST00000461804 NINLQ9Y2I6 1382 aa28.59■■■□□ 2.17
CCNL1-203ENST00000461804 FAM135BQ49AJ0 1406 aa28.58■■■□□ 2.17
CCNL1-203ENST00000461804 SLC26A8Q96RN1 970 aa28.58■■■□□ 2.17
CCNL1-203ENST00000461804 USP32Q8NFA0 1604 aa28.57■■■□□ 2.16
CCNL1-203ENST00000461804 SIRT1Q96EB6 747 aa28.55■■■□□ 2.16
CCNL1-203ENST00000461804 A0A1W2PP64 1363 aa28.54■■■□□ 2.16
CCNL1-203ENST00000461804 ROBO2Q9HCK4 1378 aa28.54■■■□□ 2.16
CCNL1-203ENST00000461804 PTPRUQ92729 1446 aa28.51■■■□□ 2.15
CCNL1-203ENST00000461804 CD163L1Q9NR16 1453 aa28.51■■■□□ 2.15
CCNL1-203ENST00000461804 CGNL1Q0VF96 1302 aa28.51■■■□□ 2.15
CCNL1-203ENST00000461804 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.15
CCNL1-203ENST00000461804 SENP3-EIF4A1A0A087X0R7 540 aa28.5■■■□□ 2.15
CCNL1-203ENST00000461804 TBX22Q9Y458 520 aa28.49■■■□□ 2.15
CCNL1-203ENST00000461804 WASLO00401 505 aaPredicted RBP28.48■■■□□ 2.15
CCNL1-203ENST00000461804 TERF2IPQ9NYB0 399 aa28.47■■■□□ 2.15
CCNL1-203ENST00000461804 CABP1Q9NZU7 370 aa28.47■■■□□ 2.15
CCNL1-203ENST00000461804 DIP2AQ14689 1571 aa28.47■■■□□ 2.15
CCNL1-203ENST00000461804 MORC1Q86VD1 984 aa28.46■■■□□ 2.15
CCNL1-203ENST00000461804 NSD2O96028 1365 aa28.43■■■□□ 2.14
CCNL1-203ENST00000461804 SETD1BQ9UPS6 1966 aaKnown RBP28.43■■■□□ 2.14
CCNL1-203ENST00000461804 BLMP54132 1417 aaPredicted RBP28.42■■■□□ 2.14
CCNL1-203ENST00000461804 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.42■■■□□ 2.14
CCNL1-203ENST00000461804 AMOTL2Q9Y2J4 779 aa28.42■■■□□ 2.14
CCNL1-203ENST00000461804 INSRP06213 1382 aa28.42■■■□□ 2.14
CCNL1-203ENST00000461804 TNNT2P45379 298 aaPredicted RBP28.41■■■□□ 2.14
CCNL1-203ENST00000461804 HDGFL2Q7Z4V5 671 aaPredicted RBP28.41■■■□□ 2.14
CCNL1-203ENST00000461804 ADAMTS8Q9UP79 889 aa28.4■■■□□ 2.14
CCNL1-203ENST00000461804 ADGRB2O60241 1585 aa28.39■■■□□ 2.14
CCNL1-203ENST00000461804 ATP7BP35670 1465 aa28.39■■■□□ 2.14
CCNL1-203ENST00000461804 WDR43Q15061 677 aaKnown RBP eCLIP28.38■■■□□ 2.13
CCNL1-203ENST00000461804 PPIP5K1Q6PFW1 1433 aa28.38■■■□□ 2.13
CCNL1-203ENST00000461804 ANKLE2Q86XL3 938 aa28.37■■■□□ 2.13
CCNL1-203ENST00000461804 PTCH1Q13635 1447 aa28.37■■■□□ 2.13
CCNL1-203ENST00000461804 NUDT16Q96DE0 195 aaKnown RBP28.37■■■□□ 2.13
CCNL1-203ENST00000461804 XRN1Q8IZH2 1706 aaKnown RBP28.35■■■□□ 2.13
CCNL1-203ENST00000461804 NCKAP5LQ9HCH0 1330 aa28.35■■■□□ 2.13
CCNL1-203ENST00000461804 GGNBP2Q9H3C7 697 aa28.34■■■□□ 2.13
CCNL1-203ENST00000461804 FYB1O15117 783 aa28.33■■■□□ 2.13
CCNL1-203ENST00000461804 POLR3AO14802 1390 aaPredicted RBP28.33■■■□□ 2.13
CCNL1-203ENST00000461804 PRR36Q9H6K5 1346 aa28.33■■■□□ 2.13
CCNL1-203ENST00000461804 SUPT16HQ9Y5B9 1047 aaKnown RBP28.32■■■□□ 2.12
CCNL1-203ENST00000461804 CCDC61Q9Y6R9 512 aa28.32■■■□□ 2.12
CCNL1-203ENST00000461804 CPSF1Q10570 1443 aaKnown RBP28.32■■■□□ 2.12
CCNL1-203ENST00000461804 ANKRD26Q9UPS8 1709 aa28.31■■■□□ 2.12
CCNL1-203ENST00000461804 SALL2Q9Y467 1007 aaPredicted RBP28.31■■■□□ 2.12
CCNL1-203ENST00000461804 SMG6Q86US8 1419 aaKnown RBP28.3■■■□□ 2.12
CCNL1-203ENST00000461804 PIK3R4Q99570 1358 aa28.3■■■□□ 2.12
CCNL1-203ENST00000461804 CDC42BPGQ6DT37 1551 aa28.3■■■□□ 2.12
CCNL1-203ENST00000461804 KIF20BQ96Q89 1820 aa28.3■■■□□ 2.12
CCNL1-203ENST00000461804 KCNA6P17658 529 aa28.28■■■□□ 2.12
CCNL1-203ENST00000461804 MTHFSP49914 203 aa28.28■■■□□ 2.12
CCNL1-203ENST00000461804 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.27■■■□□ 2.12
CCNL1-203ENST00000461804 FKBP8Q14318 412 aa28.26■■■□□ 2.11
CCNL1-203ENST00000461804 SHPRHQ149N8 1683 aa28.26■■■□□ 2.11
CCNL1-203ENST00000461804 TOPAZ1Q8N9V7 1692 aa28.25■■■□□ 2.11
CCNL1-203ENST00000461804 NUDCQ9Y266 331 aa28.25■■■□□ 2.11
CCNL1-203ENST00000461804 NUTM2FA1L443 756 aa28.24■■■□□ 2.11
CCNL1-203ENST00000461804 NEFLP07196 543 aa28.24■■■□□ 2.11
CCNL1-203ENST00000461804 EDC4Q6P2E9 1401 aaKnown RBP28.24■■■□□ 2.11
CCNL1-203ENST00000461804 MON2Q7Z3U7 1717 aa28.23■■■□□ 2.11
CCNL1-203ENST00000461804 ITSN1Q15811 1721 aa28.23■■■□□ 2.11
CCNL1-203ENST00000461804 AKAP12Q02952 1782 aa28.23■■■□□ 2.11
CCNL1-203ENST00000461804 CHD2O14647 1828 aaKnown RBP28.22■■■□□ 2.11
CCNL1-203ENST00000461804 NPHP4O75161 1426 aaPredicted RBP28.21■■■□□ 2.11
CCNL1-203ENST00000461804 CCDC146Q8IYE0 955 aa28.2■■■□□ 2.1
CCNL1-203ENST00000461804 CFAP53Q96M91 514 aa28.19■■■□□ 2.1
CCNL1-203ENST00000461804 NKTRP30414 1462 aaKnown RBP28.18■■■□□ 2.1
CCNL1-203ENST00000461804 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
CCNL1-203ENST00000461804 NME9Q86XW9 330 aa28.16■■■□□ 2.1
CCNL1-203ENST00000461804 ZNF692Q9BU19 519 aaPredicted RBP28.16■■■□□ 2.1
CCNL1-203ENST00000461804 PLEKHG3A1L390 1219 aa28.15■■■□□ 2.1
CCNL1-203ENST00000461804 ACEP12821 1306 aa28.14■■■□□ 2.1
CCNL1-203ENST00000461804 CDCA7LQ96GN5 454 aa28.13■■■□□ 2.09
CCNL1-203ENST00000461804 NRKQ7Z2Y5 1582 aa28.12■■■□□ 2.09
CCNL1-203ENST00000461804 RGPD8O14715 1765 aaPredicted RBP28.12■■■□□ 2.09
CCNL1-203ENST00000461804 ZRANB1Q9UGI0 708 aa28.11■■■□□ 2.09
CCNL1-203ENST00000461804 COL3A1P02461 1466 aaPredicted RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms