RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 VWDEQ8N2E2 1590 aa9.73□□□□□ -0.85
CDKN3-205ENST00000458126 PHF14O94880 888 aa9.73□□□□□ -0.85
CDKN3-205ENST00000458126 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
CDKN3-205ENST00000458126 CARMIL2Q6F5E8 1435 aa9.73□□□□□ -0.85
CDKN3-205ENST00000458126 COL13A1Q5TAT6 717 aaPredicted RBP9.72□□□□□ -0.85
CDKN3-205ENST00000458126 FBXW7Q969H0 707 aa9.72□□□□□ -0.85
CDKN3-205ENST00000458126 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
CDKN3-205ENST00000458126 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
CDKN3-205ENST00000458126 UTRNP46939 3433 aa9.72□□□□□ -0.85
CDKN3-205ENST00000458126 JCADQ9P266 1359 aa9.72□□□□□ -0.85
CDKN3-205ENST00000458126 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
CDKN3-205ENST00000458126 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
CDKN3-205ENST00000458126 MAGI2Q86UL8 1455 aa9.71□□□□□ -0.86
CDKN3-205ENST00000458126 DPYSL4O14531 572 aa9.7□□□□□ -0.86
CDKN3-205ENST00000458126 TYW1BQ6NUM6 668 aa9.7□□□□□ -0.86
CDKN3-205ENST00000458126 DENND4BO75064 1496 aaPredicted RBP9.7□□□□□ -0.86
CDKN3-205ENST00000458126 MEX3CQ5U5Q3 659 aaKnown RBP9.69□□□□□ -0.86
CDKN3-205ENST00000458126 TNS4Q8IZW8 715 aa9.69□□□□□ -0.86
CDKN3-205ENST00000458126 ZBED2Q9BTP6 218 aa9.69□□□□□ -0.86
CDKN3-205ENST00000458126 CDK13Q14004 1512 aaKnown RBP9.68□□□□□ -0.86
CDKN3-205ENST00000458126 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
CDKN3-205ENST00000458126 EPAS1Q99814 870 aa9.68□□□□□ -0.86
CDKN3-205ENST00000458126 NWD1Q149M9 1564 aa9.67□□□□□ -0.86
CDKN3-205ENST00000458126 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
CDKN3-205ENST00000458126 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
CDKN3-205ENST00000458126 E2F4Q16254 413 aa9.67□□□□□ -0.86
CDKN3-205ENST00000458126 ARIH1Q9Y4X5 557 aaPredicted RBP9.67□□□□□ -0.86
CDKN3-205ENST00000458126 NPATQ14207 1427 aa9.66□□□□□ -0.86
CDKN3-205ENST00000458126 SPATA31A6Q5VVP1 1343 aa9.66□□□□□ -0.86
CDKN3-205ENST00000458126 SPDYE16A6NNV3 312 aaPredicted RBP9.66□□□□□ -0.86
CDKN3-205ENST00000458126 PPP1R3GB7ZBB8 358 aa9.66□□□□□ -0.86
CDKN3-205ENST00000458126 WDR70Q9NW82 654 aa9.66□□□□□ -0.86
CDKN3-205ENST00000458126 ZNF142P52746 1687 aaPredicted RBP9.66□□□□□ -0.86
CDKN3-205ENST00000458126 SYNMO15061 1565 aa9.65□□□□□ -0.86
CDKN3-205ENST00000458126 ABCA9Q8IUA7 1624 aa9.64□□□□□ -0.87
CDKN3-205ENST00000458126 PDIA6Q15084 440 aa9.64□□□□□ -0.87
CDKN3-205ENST00000458126 C9orf84Q5VXU9 1444 aa9.64□□□□□ -0.87
CDKN3-205ENST00000458126 NEURL4Q96JN8 1562 aa9.63□□□□□ -0.87
CDKN3-205ENST00000458126 ATP10AO60312 1499 aa9.62□□□□□ -0.87
CDKN3-205ENST00000458126 KCTD12Q96CX2 325 aaKnown RBP9.62□□□□□ -0.87
CDKN3-205ENST00000458126 NBPF3Q9H094 633 aa9.62□□□□□ -0.87
CDKN3-205ENST00000458126 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
CDKN3-205ENST00000458126 C6orf132Q5T0Z8 1188 aa9.61□□□□□ -0.87
CDKN3-205ENST00000458126 SUPT6HQ7KZ85 1726 aaKnown RBP9.61□□□□□ -0.87
CDKN3-205ENST00000458126 CEP170BQ9Y4F5 1589 aaPredicted RBP9.6□□□□□ -0.87
CDKN3-205ENST00000458126 COL9A1P20849 921 aa9.6□□□□□ -0.87
CDKN3-205ENST00000458126 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
CDKN3-205ENST00000458126 RABGEF1Q9UJ41 708 aa9.6□□□□□ -0.87
CDKN3-205ENST00000458126 ROBO1Q9Y6N7 1651 aa9.6□□□□□ -0.87
CDKN3-205ENST00000458126 ABCA8O94911 1581 aa9.59□□□□□ -0.87
CDKN3-205ENST00000458126 DDX12PQ92771 950 aa9.59□□□□□ -0.87
CDKN3-205ENST00000458126 KDM5CP41229 1560 aa9.58□□□□□ -0.88
CDKN3-205ENST00000458126 AFF2P51816 1311 aa9.58□□□□□ -0.88
CDKN3-205ENST00000458126 GOLGA8CPA6NN73 597 aa9.58□□□□□ -0.88
CDKN3-205ENST00000458126 STRCP1A6NGW2 1772 aa9.58□□□□□ -0.88
CDKN3-205ENST00000458126 BLMP54132 1417 aaPredicted RBP9.57□□□□□ -0.88
CDKN3-205ENST00000458126 MYO3AQ8NEV4 1616 aa9.57□□□□□ -0.88
CDKN3-205ENST00000458126 DEFB132Q7Z7B7 95 aa9.57□□□□□ -0.88
CDKN3-205ENST00000458126 FGD6Q6ZV73 1430 aa9.56□□□□□ -0.88
CDKN3-205ENST00000458126 HECW1Q76N89 1606 aa9.56□□□□□ -0.88
CDKN3-205ENST00000458126 HSPA6P17066 643 aa9.56□□□□□ -0.88
CDKN3-205ENST00000458126 NGLY1Q96IV0 654 aa9.56□□□□□ -0.88
CDKN3-205ENST00000458126 QTRT2Q9H974 415 aaKnown RBP9.56□□□□□ -0.88
CDKN3-205ENST00000458126 POLR1AO95602 1720 aaPredicted RBP9.56□□□□□ -0.88
CDKN3-205ENST00000458126 EN1Q05925 392 aaPredicted RBP9.55□□□□□ -0.88
CDKN3-205ENST00000458126 NBR1Q14596 966 aa9.55□□□□□ -0.88
CDKN3-205ENST00000458126 PROX2Q3B8N5 592 aa9.55□□□□□ -0.88
CDKN3-205ENST00000458126 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
CDKN3-205ENST00000458126 LAPTM4BQ86VI4 370 aa9.55□□□□□ -0.88
CDKN3-205ENST00000458126 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
CDKN3-205ENST00000458126 WNT2BQ93097 391 aa9.54□□□□□ -0.88
CDKN3-205ENST00000458126 DISP1Q96F81 1524 aa9.54□□□□□ -0.88
CDKN3-205ENST00000458126 RTEL1-TNFRSF6BF6WH68 1400 aa9.54□□□□□ -0.88
CDKN3-205ENST00000458126 CNTLNQ9NXG0 1405 aa9.54□□□□□ -0.88
CDKN3-205ENST00000458126 PHLPP1O60346 1717 aa9.53□□□□□ -0.88
CDKN3-205ENST00000458126 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
CDKN3-205ENST00000458126 NINLQ9Y2I6 1382 aa9.53□□□□□ -0.88
CDKN3-205ENST00000458126 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
CDKN3-205ENST00000458126 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
CDKN3-205ENST00000458126 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
CDKN3-205ENST00000458126 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
CDKN3-205ENST00000458126 ESF1Q9H501 851 aaKnown RBP9.52□□□□□ -0.89
CDKN3-205ENST00000458126 CAMTA1Q9Y6Y1 1673 aa9.51□□□□□ -0.89
CDKN3-205ENST00000458126 AGLP35573 1532 aa9.51□□□□□ -0.89
CDKN3-205ENST00000458126 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
CDKN3-205ENST00000458126 MAP3K7O43318 606 aa9.51□□□□□ -0.89
CDKN3-205ENST00000458126 COL16A1Q07092 1604 aaPredicted RBP9.51□□□□□ -0.89
CDKN3-205ENST00000458126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDKN3-205ENST00000458126 PTPN5P54829 565 aa9.5□□□□□ -0.89
CDKN3-205ENST00000458126 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
CDKN3-205ENST00000458126 CHD4Q14839 1912 aa9.49□□□□□ -0.89
CDKN3-205ENST00000458126 ANKK1Q8NFD2 765 aa9.49□□□□□ -0.89
CDKN3-205ENST00000458126 GRXCR2A6NFK2 248 aa9.48□□□□□ -0.89
CDKN3-205ENST00000458126 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
CDKN3-205ENST00000458126 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
CDKN3-205ENST00000458126 WWC3Q9ULE0 1092 aa9.48□□□□□ -0.89
CDKN3-205ENST00000458126 MED14O60244 1454 aa9.47□□□□□ -0.89
CDKN3-205ENST00000458126 LRRC9Q6ZRR7 1453 aa9.47□□□□□ -0.89
CDKN3-205ENST00000458126 XIRP1Q702N8 1843 aaKnown RBP9.47□□□□□ -0.89
CDKN3-205ENST00000458126 OSBPP22059 807 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms