RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 Q3C1V9 767 aa6.85□□□□□ -1.31
HMGB3P30-201ENST00000457863 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
HMGB3P30-201ENST00000457863 FCF1Q9Y324 198 aaKnown RBP6.85□□□□□ -1.31
HMGB3P30-201ENST00000457863 KDM4AO75164 1064 aa6.84□□□□□ -1.31
HMGB3P30-201ENST00000457863 CLCN1P35523 988 aa6.84□□□□□ -1.31
HMGB3P30-201ENST00000457863 C14orf37Q86TY3 774 aa6.84□□□□□ -1.31
HMGB3P30-201ENST00000457863 GPCPD1Q9NPB8 672 aa6.84□□□□□ -1.31
HMGB3P30-201ENST00000457863 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
HMGB3P30-201ENST00000457863 FAM217BQ9NTX9 383 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P30-201ENST00000457863 DGAT1O75907 488 aa6.82□□□□□ -1.32
HMGB3P30-201ENST00000457863 MMP16P51512 607 aa6.82□□□□□ -1.32
HMGB3P30-201ENST00000457863 HOXA2O43364 376 aa6.81□□□□□ -1.32
HMGB3P30-201ENST00000457863 PKDCCQ504Y2 493 aa6.81□□□□□ -1.32
HMGB3P30-201ENST00000457863 PKD2L1Q9P0L9 805 aa6.81□□□□□ -1.32
HMGB3P30-201ENST00000457863 TNFRSF10AO00220 468 aa6.8□□□□□ -1.32
HMGB3P30-201ENST00000457863 DXOO77932 396 aaKnown RBP6.8□□□□□ -1.32
HMGB3P30-201ENST00000457863 BARGINQ6ZT62 677 aa6.79□□□□□ -1.32
HMGB3P30-201ENST00000457863 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
HMGB3P30-201ENST00000457863 FAM187AA6NFU0 413 aa6.78□□□□□ -1.32
HMGB3P30-201ENST00000457863 CD2BP2O95400 341 aaKnown RBP6.78□□□□□ -1.32
HMGB3P30-201ENST00000457863 AMHR2Q16671 573 aa6.78□□□□□ -1.32
HMGB3P30-201ENST00000457863 ZMYND10O75800 440 aa6.77□□□□□ -1.33
HMGB3P30-201ENST00000457863 NPM2Q86SE8 214 aaKnown RBP6.77□□□□□ -1.33
HMGB3P30-201ENST00000457863 HLA-CQ95604 372 aa6.77□□□□□ -1.33
HMGB3P30-201ENST00000457863 REPIN1Q9BWE0 567 aaKnown RBP6.77□□□□□ -1.33
HMGB3P30-201ENST00000457863 TOR4AQ9NXH8 423 aa6.77□□□□□ -1.33
HMGB3P30-201ENST00000457863 TRIM32Q13049 653 aa6.76□□□□□ -1.33
HMGB3P30-201ENST00000457863 CRIPAKQ8N1N5 446 aa6.76□□□□□ -1.33
HMGB3P30-201ENST00000457863 ZBTB24O43167 697 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P30-201ENST00000457863 FOXC1Q12948 553 aa6.75□□□□□ -1.33
HMGB3P30-201ENST00000457863 KRI1Q8N9T8 703 aaKnown RBP6.75□□□□□ -1.33
HMGB3P30-201ENST00000457863 ZC3H15Q8WU90 426 aaKnown RBP6.75□□□□□ -1.33
HMGB3P30-201ENST00000457863 WNT7AO00755 349 aa6.74□□□□□ -1.33
HMGB3P30-201ENST00000457863 AVPP01185 164 aa6.74□□□□□ -1.33
HMGB3P30-201ENST00000457863 GUCA2AQ02747 115 aa6.74□□□□□ -1.33
HMGB3P30-201ENST00000457863 ZNF787Q6DD87 383 aa6.74□□□□□ -1.33
HMGB3P30-201ENST00000457863 RETREG3Q86VR2 466 aa6.74□□□□□ -1.33
HMGB3P30-201ENST00000457863 JUNDP17535 347 aa6.73□□□□□ -1.33
HMGB3P30-201ENST00000457863 NUTM1Q86Y26 1132 aa6.73□□□□□ -1.33
HMGB3P30-201ENST00000457863 SSTR3P32745 418 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P30-201ENST00000457863 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P30-201ENST00000457863 GIGYF2Q6Y7W6 1299 aaKnown RBP6.72□□□□□ -1.33
HMGB3P30-201ENST00000457863 CYP4X1Q8N118 509 aa6.72□□□□□ -1.33
HMGB3P30-201ENST00000457863 AAASQ9NRG9 546 aa6.72□□□□□ -1.33
HMGB3P30-201ENST00000457863 FDX1P10109 184 aa6.71□□□□□ -1.34
HMGB3P30-201ENST00000457863 WNT7BP56706 349 aa6.71□□□□□ -1.34
HMGB3P30-201ENST00000457863 CTC1Q2NKJ3 1217 aa6.71□□□□□ -1.34
HMGB3P30-201ENST00000457863 ST8SIA5O15466 376 aa6.7□□□□□ -1.34
HMGB3P30-201ENST00000457863 SMCPP49901 116 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P30-201ENST00000457863 SPIRE2Q8WWL2 714 aa6.7□□□□□ -1.34
HMGB3P30-201ENST00000457863 PCDHGC3Q9UN70 934 aa6.7□□□□□ -1.34
HMGB3P30-201ENST00000457863 PARP9Q8IXQ6 854 aa6.69□□□□□ -1.34
HMGB3P30-201ENST00000457863 SYMPKQ92797 1274 aaKnown RBP6.69□□□□□ -1.34
HMGB3P30-201ENST00000457863 NUDT12Q9BQG2 462 aa6.69□□□□□ -1.34
HMGB3P30-201ENST00000457863 GJA5P36382 358 aa6.68□□□□□ -1.34
HMGB3P30-201ENST00000457863 TRIM26Q12899 539 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P30-201ENST00000457863 SNIP1Q8TAD8 396 aaKnown RBP6.68□□□□□ -1.34
HMGB3P30-201ENST00000457863 TTC24A2A3L6 582 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 MOXD2PA6NHM9 499 aa6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 C6orf229H3BNL8 230 aa6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 SUPT5HO00267 1087 aaKnown RBP6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 SKOR1P84550 965 aa6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 DIXDC1Q155Q3 683 aa6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 PTPRNQ16849 979 aa6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 CCDC24Q8N4L8 307 aa6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 MRGPRX2Q96LB1 330 aa6.67□□□□□ -1.34
HMGB3P30-201ENST00000457863 SPDYE5A6NIY4 337 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 TRIM66O15016 1216 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 AXIN1O15169 862 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 CCNYL3P0C7X3 344 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 MS4A1P11836 297 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 SMPD1P17405 629 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 DESI1Q6ICB0 168 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 ZNF775Q96BV0 537 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 BEGAINQ9BUH8 593 aa6.66□□□□□ -1.34
HMGB3P30-201ENST00000457863 POTECB2RU33 542 aa6.65□□□□□ -1.34
HMGB3P30-201ENST00000457863 MTMR2Q13614 643 aa6.65□□□□□ -1.34
HMGB3P30-201ENST00000457863 RC3H1Q5TC82 1133 aaKnown RBP6.65□□□□□ -1.34
HMGB3P30-201ENST00000457863 AK7Q96M32 723 aa6.65□□□□□ -1.34
HMGB3P30-201ENST00000457863 NDUFV2P19404 249 aa6.64□□□□□ -1.35
HMGB3P30-201ENST00000457863 RSBN1LQ6PCB5 846 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P30-201ENST00000457863 TBC1D2Q9BYX2 928 aa6.64□□□□□ -1.35
HMGB3P30-201ENST00000457863 PRR7Q8TB68 274 aa6.63□□□□□ -1.35
HMGB3P30-201ENST00000457863 J3QL48 77 aa6.62□□□□□ -1.35
HMGB3P30-201ENST00000457863 SPTLC1O15269 473 aa6.62□□□□□ -1.35
HMGB3P30-201ENST00000457863 HRCP23327 699 aa6.62□□□□□ -1.35
HMGB3P30-201ENST00000457863 PTCRAQ6ISU1 281 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P30-201ENST00000457863 EVA1BQ9NVM1 165 aa6.62□□□□□ -1.35
HMGB3P30-201ENST00000457863 DACH1Q9UI36 760 aa6.62□□□□□ -1.35
HMGB3P30-201ENST00000457863 SIAH2O43255 324 aa6.61□□□□□ -1.35
HMGB3P30-201ENST00000457863 UNC93B1Q9H1C4 597 aa6.61□□□□□ -1.35
HMGB3P30-201ENST00000457863 UBTFP17480 764 aaKnown RBP6.6□□□□□ -1.35
HMGB3P30-201ENST00000457863 SH3BP2P78314 561 aa6.6□□□□□ -1.35
HMGB3P30-201ENST00000457863 KCNH2Q12809 1159 aa6.6□□□□□ -1.35
HMGB3P30-201ENST00000457863 PRPF38BQ5VTL8 546 aaKnown RBP6.6□□□□□ -1.35
HMGB3P30-201ENST00000457863 ZBTB3Q9H5J0 574 aa6.6□□□□□ -1.35
HMGB3P30-201ENST00000457863 GMPR2Q9P2T1 348 aaKnown RBP6.6□□□□□ -1.35
HMGB3P30-201ENST00000457863 PDE4DQ08499 809 aa6.59□□□□□ -1.35
HMGB3P30-201ENST00000457863 TUSC1Q2TAM9 212 aa6.59□□□□□ -1.35
HMGB3P30-201ENST00000457863 EHBP1Q8NDI1 1231 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms