RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
GTF3C2-208ENST00000457748 STRCP1A6NGW2 1772 aa17.42■□□□□ 0.38
GTF3C2-208ENST00000457748 RBM33Q96EV2 1170 aaKnown RBP17.4■□□□□ 0.38
GTF3C2-208ENST00000457748 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
GTF3C2-208ENST00000457748 TMF1P82094 1093 aa17.39■□□□□ 0.37
GTF3C2-208ENST00000457748 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
GTF3C2-208ENST00000457748 EVC2Q86UK5 1308 aa17.38■□□□□ 0.37
GTF3C2-208ENST00000457748 SBNO2Q9Y2G9 1366 aa17.38■□□□□ 0.37
GTF3C2-208ENST00000457748 LRRC7Q96NW7 1537 aa17.37■□□□□ 0.37
GTF3C2-208ENST00000457748 CDCA8Q53HL2 280 aa17.37■□□□□ 0.37
GTF3C2-208ENST00000457748 MSH6P52701 1360 aa17.37■□□□□ 0.37
GTF3C2-208ENST00000457748 LTBP4Q8N2S1 1624 aa17.36■□□□□ 0.37
GTF3C2-208ENST00000457748 TESK2Q96S53 571 aa17.36■□□□□ 0.37
GTF3C2-208ENST00000457748 ADGRL3Q9HAR2 1447 aa17.36■□□□□ 0.37
GTF3C2-208ENST00000457748 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
GTF3C2-208ENST00000457748 ATF3P18847 181 aa17.35■□□□□ 0.37
GTF3C2-208ENST00000457748 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
GTF3C2-208ENST00000457748 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
GTF3C2-208ENST00000457748 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.35■□□□□ 0.37
GTF3C2-208ENST00000457748 WASLO00401 505 aaPredicted RBP17.34■□□□□ 0.37
GTF3C2-208ENST00000457748 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
GTF3C2-208ENST00000457748 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.37
GTF3C2-208ENST00000457748 CDK19Q9BWU1 502 aa17.33■□□□□ 0.36
GTF3C2-208ENST00000457748 ADGRB2O60241 1585 aa17.32■□□□□ 0.36
GTF3C2-208ENST00000457748 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
GTF3C2-208ENST00000457748 CADPS2Q86UW7 1296 aa17.31■□□□□ 0.36
GTF3C2-208ENST00000457748 DISP3Q9P2K9 1392 aa17.3■□□□□ 0.36
GTF3C2-208ENST00000457748 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
GTF3C2-208ENST00000457748 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
GTF3C2-208ENST00000457748 DCCP43146 1447 aa17.3■□□□□ 0.36
GTF3C2-208ENST00000457748 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
GTF3C2-208ENST00000457748 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
GTF3C2-208ENST00000457748 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
GTF3C2-208ENST00000457748 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
GTF3C2-208ENST00000457748 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
GTF3C2-208ENST00000457748 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
GTF3C2-208ENST00000457748 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
GTF3C2-208ENST00000457748 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
GTF3C2-208ENST00000457748 KIF7Q2M1P5 1343 aa17.24■□□□□ 0.35
GTF3C2-208ENST00000457748 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
GTF3C2-208ENST00000457748 C11orf95C9JLR9 678 aaPredicted RBP17.24■□□□□ 0.35
GTF3C2-208ENST00000457748 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
GTF3C2-208ENST00000457748 CCDC61Q9Y6R9 512 aa17.23■□□□□ 0.35
GTF3C2-208ENST00000457748 WASHC2AQ641Q2 1341 aa17.22■□□□□ 0.35
GTF3C2-208ENST00000457748 TOM1O60784 492 aa17.22■□□□□ 0.35
GTF3C2-208ENST00000457748 ESCO1Q5FWF5 840 aa17.22■□□□□ 0.35
GTF3C2-208ENST00000457748 NINLQ9Y2I6 1382 aa17.21■□□□□ 0.35
GTF3C2-208ENST00000457748 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
GTF3C2-208ENST00000457748 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
GTF3C2-208ENST00000457748 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
GTF3C2-208ENST00000457748 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.34
GTF3C2-208ENST00000457748 ATP7BP35670 1465 aa17.2■□□□□ 0.34
GTF3C2-208ENST00000457748 MST1RQ04912 1400 aa17.2■□□□□ 0.34
GTF3C2-208ENST00000457748 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
GTF3C2-208ENST00000457748 C1orf167Q5SNV9 1468 aa17.19■□□□□ 0.34
GTF3C2-208ENST00000457748 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
GTF3C2-208ENST00000457748 HDGFL2Q7Z4V5 671 aaPredicted RBP17.18■□□□□ 0.34
GTF3C2-208ENST00000457748 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
GTF3C2-208ENST00000457748 TERF2IPQ9NYB0 399 aa17.18■□□□□ 0.34
GTF3C2-208ENST00000457748 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
GTF3C2-208ENST00000457748 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
GTF3C2-208ENST00000457748 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
GTF3C2-208ENST00000457748 SLC12A5Q9H2X9 1139 aa17.17■□□□□ 0.34
GTF3C2-208ENST00000457748 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
GTF3C2-208ENST00000457748 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
GTF3C2-208ENST00000457748 PLEKHG3A1L390 1219 aa17.15■□□□□ 0.34
GTF3C2-208ENST00000457748 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
GTF3C2-208ENST00000457748 TOPAZ1Q8N9V7 1692 aa17.15■□□□□ 0.34
GTF3C2-208ENST00000457748 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
GTF3C2-208ENST00000457748 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
GTF3C2-208ENST00000457748 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
GTF3C2-208ENST00000457748 ACEP12821 1306 aa17.14■□□□□ 0.33
GTF3C2-208ENST00000457748 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
GTF3C2-208ENST00000457748 MYOM1P52179 1685 aa17.13■□□□□ 0.33
GTF3C2-208ENST00000457748 PSME1Q06323 249 aa17.12■□□□□ 0.33
GTF3C2-208ENST00000457748 BRINP3Q76B58 766 aa17.12■□□□□ 0.33
GTF3C2-208ENST00000457748 PANK3Q9H999 370 aa17.12■□□□□ 0.33
GTF3C2-208ENST00000457748 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
GTF3C2-208ENST00000457748 ANKRD36BQ8N2N9 1353 aa17.12■□□□□ 0.33
GTF3C2-208ENST00000457748 FOXO3O43524 673 aa17.11■□□□□ 0.33
GTF3C2-208ENST00000457748 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
GTF3C2-208ENST00000457748 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
GTF3C2-208ENST00000457748 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
GTF3C2-208ENST00000457748 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
GTF3C2-208ENST00000457748 ROBO1Q9Y6N7 1651 aa17.08■□□□□ 0.32
GTF3C2-208ENST00000457748 ILDR2Q71H61 639 aa17.08■□□□□ 0.32
GTF3C2-208ENST00000457748 CPSF1Q10570 1443 aaKnown RBP17.07■□□□□ 0.32
GTF3C2-208ENST00000457748 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
GTF3C2-208ENST00000457748 KRT28Q7Z3Y7 464 aa17.07■□□□□ 0.32
GTF3C2-208ENST00000457748 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
GTF3C2-208ENST00000457748 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
GTF3C2-208ENST00000457748 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
GTF3C2-208ENST00000457748 EDC4Q6P2E9 1401 aaKnown RBP17.05■□□□□ 0.32
GTF3C2-208ENST00000457748 NSD3Q9BZ95 1437 aa17.05■□□□□ 0.32
GTF3C2-208ENST00000457748 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
GTF3C2-208ENST00000457748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
GTF3C2-208ENST00000457748 USP6P35125 1406 aa17.04■□□□□ 0.32
GTF3C2-208ENST00000457748 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
GTF3C2-208ENST00000457748 CGNL1Q0VF96 1302 aa17.03■□□□□ 0.32
GTF3C2-208ENST00000457748 SOCS7O14512 581 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms