RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 DHX37Q8IY37 1157 aaKnown RBP9.03□□□□□ -0.96
CUBNP3-201ENST00000457461 FTSJ3Q8IY81 847 aaKnown RBP9.03□□□□□ -0.96
CUBNP3-201ENST00000457461 RPGRIP1LQ68CZ1 1315 aa9.03□□□□□ -0.96
CUBNP3-201ENST00000457461 ROCK2O75116 1388 aaKnown RBP9.03□□□□□ -0.96
CUBNP3-201ENST00000457461 ZFYVE9O95405 1425 aa9.02□□□□□ -0.96
CUBNP3-201ENST00000457461 KDM2AQ9Y2K7 1162 aa9.02□□□□□ -0.97
CUBNP3-201ENST00000457461 PIK3C2GO75747 1445 aa9.02□□□□□ -0.97
CUBNP3-201ENST00000457461 C3P01024 1663 aa9.02□□□□□ -0.97
CUBNP3-201ENST00000457461 CNGB1Q14028 1251 aaPredicted RBP9.01□□□□□ -0.97
CUBNP3-201ENST00000457461 ZMYM3Q14202 1370 aa9.01□□□□□ -0.97
CUBNP3-201ENST00000457461 CANXP27824 592 aaKnown RBP9.01□□□□□ -0.97
CUBNP3-201ENST00000457461 MYO3AQ8NEV4 1616 aa9□□□□□ -0.97
CUBNP3-201ENST00000457461 IDI1Q13907 227 aa9□□□□□ -0.97
CUBNP3-201ENST00000457461 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
CUBNP3-201ENST00000457461 HIRIP3Q9BW71 556 aaPredicted RBP9□□□□□ -0.97
CUBNP3-201ENST00000457461 ADGRB1O14514 1584 aa9□□□□□ -0.97
CUBNP3-201ENST00000457461 ADAMTSL3P82987 1691 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 HSP90AA1P07900 732 aaKnown RBP8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 CARD11Q9BXL7 1154 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 CCDC7Q96M83 1385 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 A2ML1A8K2U0 1454 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 UBR1Q8IWV7 1749 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 NBPF1Q3BBV0 1214 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 FBXO31Q5XUX0 539 aaPredicted RBP8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 BCANQ96GW7 911 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 PDCL3Q9H2J4 239 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 ADGRF5Q8IZF2 1346 aa8.99□□□□□ -0.97
CUBNP3-201ENST00000457461 SCAF11Q99590 1463 aaKnown RBP8.98□□□□□ -0.97
CUBNP3-201ENST00000457461 SETD1AO15047 1707 aaKnown RBP8.98□□□□□ -0.97
CUBNP3-201ENST00000457461 MLECQ14165 292 aa8.97□□□□□ -0.97
CUBNP3-201ENST00000457461 NLRP1Q9C000 1473 aa8.97□□□□□ -0.97
CUBNP3-201ENST00000457461 TNRQ92752 1358 aa8.96□□□□□ -0.98
CUBNP3-201ENST00000457461 KIF7Q2M1P5 1343 aa8.96□□□□□ -0.98
CUBNP3-201ENST00000457461 ASXL1Q8IXJ9 1541 aa8.95□□□□□ -0.98
CUBNP3-201ENST00000457461 ARHGEF28Q8N1W1 1705 aaKnown RBP8.95□□□□□ -0.98
CUBNP3-201ENST00000457461 RIMS1Q86UR5 1692 aaKnown RBP8.95□□□□□ -0.98
CUBNP3-201ENST00000457461 IPO9Q96P70 1041 aaKnown RBP8.95□□□□□ -0.98
CUBNP3-201ENST00000457461 C14orf93Q9H972 538 aaKnown RBP8.95□□□□□ -0.98
CUBNP3-201ENST00000457461 NRXN3Q9Y4C0 1643 aa8.95□□□□□ -0.98
CUBNP3-201ENST00000457461 ST20-MTHFSA0A0A6YYL1 179 aa8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 DDX10Q13206 875 aaKnown RBP8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 ANP32BQ92688 251 aaKnown RBP8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 TESK2Q96S53 571 aa8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 ESF1Q9H501 851 aaKnown RBP8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 ZNF219Q9P2Y4 722 aaPredicted RBP8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 SETD1BQ9UPS6 1966 aaKnown RBP8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
CUBNP3-201ENST00000457461 ZNF142P52746 1687 aaPredicted RBP8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 SBNO2Q9Y2G9 1366 aa8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 NBR1Q14596 966 aa8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 CFAP70Q5T0N1 1121 aa8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 ZFP91Q96JP5 570 aaPredicted RBP8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 ALKQ9UM73 1620 aa8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 RIMS2Q9UQ26 1411 aa8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 EIF3AQ14152 1382 aaKnown RBP8.93□□□□□ -0.98
CUBNP3-201ENST00000457461 NEFMP07197 916 aa8.92□□□□□ -0.98
CUBNP3-201ENST00000457461 GSE1Q14687 1217 aa8.92□□□□□ -0.98
CUBNP3-201ENST00000457461 MAP7D2Q96T17 732 aa8.92□□□□□ -0.98
CUBNP3-201ENST00000457461 SLIT1O75093 1534 aa8.92□□□□□ -0.98
CUBNP3-201ENST00000457461 QRICH2Q9H0J4 1663 aa8.92□□□□□ -0.98
CUBNP3-201ENST00000457461 ARHGAP23Q9P227 1491 aa8.92□□□□□ -0.98
CUBNP3-201ENST00000457461 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
CUBNP3-201ENST00000457461 MYOM1P52179 1685 aa8.91□□□□□ -0.98
CUBNP3-201ENST00000457461 UTP14CQ5TAP6 766 aaKnown RBP8.91□□□□□ -0.98
CUBNP3-201ENST00000457461 DISP3Q9P2K9 1392 aa8.91□□□□□ -0.98
CUBNP3-201ENST00000457461 PTPRMP28827 1452 aa8.9□□□□□ -0.98
CUBNP3-201ENST00000457461 KNDC1Q76NI1 1749 aa8.9□□□□□ -0.98
CUBNP3-201ENST00000457461 ANP32AP39687 249 aaKnown RBP8.9□□□□□ -0.98
CUBNP3-201ENST00000457461 SMAP1Q8IYB5 467 aaPredicted RBP8.9□□□□□ -0.98
CUBNP3-201ENST00000457461 CHMP4BQ9H444 224 aaKnown RBP8.9□□□□□ -0.98
CUBNP3-201ENST00000457461 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
CUBNP3-201ENST00000457461 TMEM2Q9UHN6 1383 aa8.9□□□□□ -0.98
CUBNP3-201ENST00000457461 MMP14P50281 582 aa8.89□□□□□ -0.99
CUBNP3-201ENST00000457461 CEP170BQ9Y4F5 1589 aaPredicted RBP8.89□□□□□ -0.99
CUBNP3-201ENST00000457461 DLC1Q96QB1 1528 aa8.89□□□□□ -0.99
CUBNP3-201ENST00000457461 CLGNO14967 610 aa8.88□□□□□ -0.99
CUBNP3-201ENST00000457461 TPM2P07951 284 aa8.88□□□□□ -0.99
CUBNP3-201ENST00000457461 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.88□□□□□ -0.99
CUBNP3-201ENST00000457461 SPINK5Q9NQ38 1064 aaPredicted RBP8.88□□□□□ -0.99
CUBNP3-201ENST00000457461 CEBPAP49715 358 aaPredicted RBP8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 TMF1P82094 1093 aa8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 TAF3Q5VWG9 929 aa8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 SECISBP2LQ93073 1101 aaKnown RBP8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 STAG3Q9UJ98 1225 aa8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 BRPF3Q9ULD4 1205 aa8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 YTHDC2Q9H6S0 1430 aaKnown RBP8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 MED14O60244 1454 aa8.87□□□□□ -0.99
CUBNP3-201ENST00000457461 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 TICAM2Q86XR7 235 aa8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 CCER2I3L3R5 266 aa8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 CLCN1P35523 988 aa8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 GRIPAP1Q4V328 841 aa8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 TECPR2O15040 1411 aa8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 DIP2AQ14689 1571 aa8.86□□□□□ -0.99
CUBNP3-201ENST00000457461 CPS1P31327 1500 aa8.85□□□□□ -0.99
CUBNP3-201ENST00000457461 TULP4Q9NRJ4 1543 aa8.85□□□□□ -0.99
CUBNP3-201ENST00000457461 ADAMTS13Q76LX8 1427 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms