RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 YTHDC2Q9H6S0 1430 aaKnown RBP38.89■■■■□ 3.82
SMIM12-205ENST00000456842 MYOM2P54296 1465 aa38.87■■■■□ 3.81
SMIM12-205ENST00000456842 NRXN1Q9ULB1 1477 aa38.87■■■■□ 3.81
SMIM12-205ENST00000456842 MEX3CQ5U5Q3 659 aaKnown RBP38.86■■■■□ 3.81
SMIM12-205ENST00000456842 LRRC59Q96AG4 307 aaKnown RBP38.86■■■■□ 3.81
SMIM12-205ENST00000456842 KDM2AQ9Y2K7 1162 aa38.86■■■■□ 3.81
SMIM12-205ENST00000456842 NHSL1Q5SYE7 1610 aa38.85■■■■□ 3.81
SMIM12-205ENST00000456842 NUTM2FA1L443 756 aa38.84■■■■□ 3.81
SMIM12-205ENST00000456842 DCAF11Q8TEB1 546 aa38.82■■■■□ 3.8
SMIM12-205ENST00000456842 SHPRHQ149N8 1683 aa38.81■■■■□ 3.8
SMIM12-205ENST00000456842 ESCO1Q5FWF5 840 aa38.8■■■■□ 3.8
SMIM12-205ENST00000456842 DHX57Q6P158 1386 aaKnown RBP38.8■■■■□ 3.8
SMIM12-205ENST00000456842 CDC42BPGQ6DT37 1551 aa38.76■■■■□ 3.8
SMIM12-205ENST00000456842 PNPLA6Q8IY17 1366 aa38.75■■■■□ 3.79
SMIM12-205ENST00000456842 SIRT1Q96EB6 747 aa38.75■■■■□ 3.79
SMIM12-205ENST00000456842 SOS2Q07890 1332 aaPredicted RBP38.74■■■■□ 3.79
SMIM12-205ENST00000456842 SAFB2Q14151 953 aaKnown RBP eCLIP38.74■■■■□ 3.79
SMIM12-205ENST00000456842 KNDC1Q76NI1 1749 aa38.74■■■■□ 3.79
SMIM12-205ENST00000456842 PRAM1Q96QH2 718 aa38.71■■■■□ 3.79
SMIM12-205ENST00000456842 FOXO3O43524 673 aa38.68■■■■□ 3.78
SMIM12-205ENST00000456842 XPCQ01831 940 aaPredicted RBP38.68■■■■□ 3.78
SMIM12-205ENST00000456842 LAMC1P11047 1609 aa38.67■■■■□ 3.78
SMIM12-205ENST00000456842 TRAK1Q9UPV9 953 aa38.66■■■■□ 3.78
SMIM12-205ENST00000456842 POGKQ9P215 609 aa38.65■■■■□ 3.78
SMIM12-205ENST00000456842 ZNF772Q68DY9 489 aaPredicted RBP38.64■■■■□ 3.78
SMIM12-205ENST00000456842 NPHP3Q7Z494 1330 aa38.63■■■■□ 3.77
SMIM12-205ENST00000456842 ADGRB1O14514 1584 aa38.61■■■■□ 3.77
SMIM12-205ENST00000456842 ADAMTS2O95450 1211 aa38.6■■■■□ 3.77
SMIM12-205ENST00000456842 STAC3Q96MF2 364 aa38.6■■■■□ 3.77
SMIM12-205ENST00000456842 C8orf37Q96NL8 207 aa38.6■■■■□ 3.77
SMIM12-205ENST00000456842 AFF2P51816 1311 aa38.6■■■■□ 3.77
SMIM12-205ENST00000456842 FMN2Q9NZ56 1722 aa38.55■■■■□ 3.76
SMIM12-205ENST00000456842 PXDNQ92626 1479 aa38.55■■■■□ 3.76
SMIM12-205ENST00000456842 DLC1Q96QB1 1528 aa38.55■■■■□ 3.76
SMIM12-205ENST00000456842 HIRIP3Q9BW71 556 aaPredicted RBP38.54■■■■□ 3.76
SMIM12-205ENST00000456842 MINK1Q8N4C8 1332 aaPredicted RBP38.51■■■■□ 3.76
SMIM12-205ENST00000456842 PHF8Q9UPP1 1060 aa38.5■■■■□ 3.75
SMIM12-205ENST00000456842 NGLY1Q96IV0 654 aa38.49■■■■□ 3.75
SMIM12-205ENST00000456842 KRT28Q7Z3Y7 464 aa38.47■■■■□ 3.75
SMIM12-205ENST00000456842 RXRBP28702 533 aa38.46■■■■□ 3.75
SMIM12-205ENST00000456842 QTRT2Q9H974 415 aaKnown RBP38.42■■■■□ 3.74
SMIM12-205ENST00000456842 PMFBP1Q8TBY8 1022 aa38.41■■■■□ 3.74
SMIM12-205ENST00000456842 SPATA31A3Q5VYP0 1347 aa38.4■■■■□ 3.74
SMIM12-205ENST00000456842 RGPD8O14715 1765 aaPredicted RBP38.4■■■■□ 3.74
SMIM12-205ENST00000456842 SIN3AQ96ST3 1273 aa38.4■■■■□ 3.74
SMIM12-205ENST00000456842 NBPF1Q3BBV0 1214 aa38.38■■■■□ 3.73
SMIM12-205ENST00000456842 KIF1AQ12756 1690 aa38.38■■■■□ 3.73
SMIM12-205ENST00000456842 COL22A1Q8NFW1 1626 aaPredicted RBP38.38■■■■□ 3.73
SMIM12-205ENST00000456842 WASLO00401 505 aaPredicted RBP38.36■■■■□ 3.73
SMIM12-205ENST00000456842 PRR36Q9H6K5 1346 aa38.36■■■■□ 3.73
SMIM12-205ENST00000456842 ANKARQ7Z5J8 1434 aa38.35■■■■□ 3.73
SMIM12-205ENST00000456842 ADGRB2O60241 1585 aa38.35■■■■□ 3.73
SMIM12-205ENST00000456842 PLEKHG5O94827 1062 aa38.34■■■■□ 3.73
SMIM12-205ENST00000456842 PSME1Q06323 249 aa38.34■■■■□ 3.73
SMIM12-205ENST00000456842 USP21Q9UK80 565 aa38.34■■■■□ 3.73
SMIM12-205ENST00000456842 USP32Q8NFA0 1604 aa38.32■■■■□ 3.73
SMIM12-205ENST00000456842 L3MBTL2Q969R5 705 aa38.32■■■■□ 3.72
SMIM12-205ENST00000456842 NEUROD1Q13562 356 aa38.31■■■■□ 3.72
SMIM12-205ENST00000456842 FNBP4Q8N3X1 1017 aaPredicted RBP38.31■■■■□ 3.72
SMIM12-205ENST00000456842 RBM6P78332 1123 aaKnown RBP38.3■■■■□ 3.72
SMIM12-205ENST00000456842 LMOD2Q6P5Q4 547 aa38.29■■■■□ 3.72
SMIM12-205ENST00000456842 CABLES1Q8TDN4 633 aa38.27■■■■□ 3.72
SMIM12-205ENST00000456842 TNS3Q68CZ2 1445 aa38.26■■■■□ 3.72
SMIM12-205ENST00000456842 ARHGEF28Q8N1W1 1705 aaKnown RBP38.26■■■■□ 3.71
SMIM12-205ENST00000456842 SBNO1A3KN83 1393 aa38.24■■■■□ 3.71
SMIM12-205ENST00000456842 EIF3AQ14152 1382 aaKnown RBP38.24■■■■□ 3.71
SMIM12-205ENST00000456842 TULP4Q9NRJ4 1543 aa38.23■■■■□ 3.71
SMIM12-205ENST00000456842 TRPC5Q9UL62 973 aaPredicted RBP38.22■■■■□ 3.71
SMIM12-205ENST00000456842 CDK12Q9NYV4 1490 aaPredicted RBP38.22■■■■□ 3.71
SMIM12-205ENST00000456842 CDK19Q9BWU1 502 aa38.21■■■■□ 3.71
SMIM12-205ENST00000456842 NUDT16Q96DE0 195 aaKnown RBP38.2■■■■□ 3.71
SMIM12-205ENST00000456842 RGS12O14924 1447 aa38.2■■■■□ 3.71
SMIM12-205ENST00000456842 KIAA1210Q9ULL0 1709 aa38.19■■■■□ 3.7
SMIM12-205ENST00000456842 HAP1P54257 671 aaPredicted RBP38.19■■■■□ 3.7
SMIM12-205ENST00000456842 NGDNQ8NEJ9 315 aaKnown RBP38.19■■■■□ 3.7
SMIM12-205ENST00000456842 BCL9LQ86UU0 1499 aa38.17■■■■□ 3.7
SMIM12-205ENST00000456842 UPF1Q92900 1129 aaKnown RBP eCLIP38.16■■■■□ 3.7
SMIM12-205ENST00000456842 GPRASP1Q5JY77 1395 aa38.16■■■■□ 3.7
SMIM12-205ENST00000456842 ATRNO75882 1429 aa38.15■■■■□ 3.7
SMIM12-205ENST00000456842 ARHGEF10O15013 1369 aa38.14■■■■□ 3.7
SMIM12-205ENST00000456842 ATP7BP35670 1465 aa38.11■■■■□ 3.69
SMIM12-205ENST00000456842 PAK3O75914 559 aaPredicted RBP38.09■■■■□ 3.69
SMIM12-205ENST00000456842 MARF1Q9Y4F3 1742 aaKnown RBP38.09■■■■□ 3.69
SMIM12-205ENST00000456842 CENPJQ9HC77 1338 aaPredicted RBP38.09■■■■□ 3.69
SMIM12-205ENST00000456842 UNC5CLQ8IV45 518 aa38.07■■■■□ 3.68
SMIM12-205ENST00000456842 TRIM26Q12899 539 aaPredicted RBP38.06■■■■□ 3.68
SMIM12-205ENST00000456842 SLIT2O94813 1529 aa38.06■■■■□ 3.68
SMIM12-205ENST00000456842 TRPM3Q9HCF6 1732 aaPredicted RBP38.04■■■■□ 3.68
SMIM12-205ENST00000456842 GJD4Q96KN9 370 aaPredicted RBP38.04■■■■□ 3.68
SMIM12-205ENST00000456842 CCDC61Q9Y6R9 512 aa38.03■■■■□ 3.68
SMIM12-205ENST00000456842 FAM83GA6ND36 823 aa38.01■■■■□ 3.68
SMIM12-205ENST00000456842 SRPK2P78362 688 aaKnown RBP38.01■■■■□ 3.68
SMIM12-205ENST00000456842 CABP2Q9NPB3 220 aa38.01■■■■□ 3.68
SMIM12-205ENST00000456842 NBPF8Q3BBV2 869 aa38■■■■□ 3.67
SMIM12-205ENST00000456842 ACEP12821 1306 aa38■■■■□ 3.67
SMIM12-205ENST00000456842 PLEKHG3A1L390 1219 aa37.97■■■■□ 3.67
SMIM12-205ENST00000456842 ROCK2O75116 1388 aaKnown RBP37.96■■■■□ 3.67
SMIM12-205ENST00000456842 ALS2Q96Q42 1657 aa37.96■■■■□ 3.67
SMIM12-205ENST00000456842 ABCA3Q99758 1704 aa37.95■■■■□ 3.67
SMIM12-205ENST00000456842 NUTM2GQ5VZR2 741 aa37.94■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms