RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
LINC00959-201ENST00000456581 ASXL1Q8IXJ9 1541 aa16.38■□□□□ 0.21
LINC00959-201ENST00000456581 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
LINC00959-201ENST00000456581 SETBP1Q9Y6X0 1596 aa16.37■□□□□ 0.21
LINC00959-201ENST00000456581 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
LINC00959-201ENST00000456581 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
LINC00959-201ENST00000456581 QRICH2Q9H0J4 1663 aa16.36■□□□□ 0.21
LINC00959-201ENST00000456581 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
LINC00959-201ENST00000456581 TMEM131LA2VDJ0 1609 aa16.35■□□□□ 0.21
LINC00959-201ENST00000456581 CLTCQ00610 1675 aaKnown RBP16.35■□□□□ 0.21
LINC00959-201ENST00000456581 MYO3AQ8NEV4 1616 aa16.34■□□□□ 0.21
LINC00959-201ENST00000456581 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
LINC00959-201ENST00000456581 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.21
LINC00959-201ENST00000456581 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
LINC00959-201ENST00000456581 MINK1Q8N4C8 1332 aaPredicted RBP16.33■□□□□ 0.2
LINC00959-201ENST00000456581 BACH2Q9BYV9 841 aa16.32■□□□□ 0.2
LINC00959-201ENST00000456581 NEFMP07197 916 aa16.32■□□□□ 0.2
LINC00959-201ENST00000456581 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
LINC00959-201ENST00000456581 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00959-201ENST00000456581 PRAM1Q96QH2 718 aa16.31■□□□□ 0.2
LINC00959-201ENST00000456581 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
LINC00959-201ENST00000456581 ARHGEF28Q8N1W1 1705 aaKnown RBP16.3■□□□□ 0.2
LINC00959-201ENST00000456581 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
LINC00959-201ENST00000456581 BLMP54132 1417 aaPredicted RBP16.29■□□□□ 0.2
LINC00959-201ENST00000456581 SLC24A1O60721 1099 aa16.29■□□□□ 0.2
LINC00959-201ENST00000456581 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
LINC00959-201ENST00000456581 AGLP35573 1532 aa16.29■□□□□ 0.2
LINC00959-201ENST00000456581 EVC2Q86UK5 1308 aa16.28■□□□□ 0.2
LINC00959-201ENST00000456581 SRPK2P78362 688 aaKnown RBP16.28■□□□□ 0.2
LINC00959-201ENST00000456581 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
LINC00959-201ENST00000456581 ESF1Q9H501 851 aaKnown RBP16.27■□□□□ 0.2
LINC00959-201ENST00000456581 POGKQ9P215 609 aa16.27■□□□□ 0.2
LINC00959-201ENST00000456581 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
LINC00959-201ENST00000456581 ZFYVE9O95405 1425 aa16.27■□□□□ 0.19
LINC00959-201ENST00000456581 PDE3BQ13370 1112 aa16.27■□□□□ 0.19
LINC00959-201ENST00000456581 WAPLQ7Z5K2 1190 aa16.27■□□□□ 0.19
LINC00959-201ENST00000456581 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
LINC00959-201ENST00000456581 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
LINC00959-201ENST00000456581 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
LINC00959-201ENST00000456581 YTHDC2Q9H6S0 1430 aaKnown RBP16.25■□□□□ 0.19
LINC00959-201ENST00000456581 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
LINC00959-201ENST00000456581 APAF1O14727 1248 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 PTPRMP28827 1452 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 RIMS2Q9UQ26 1411 aa16.23■□□□□ 0.19
LINC00959-201ENST00000456581 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
LINC00959-201ENST00000456581 SPATA31D1Q6ZQQ2 1576 aa16.21■□□□□ 0.19
LINC00959-201ENST00000456581 ADAMTSL3P82987 1691 aa16.21■□□□□ 0.19
LINC00959-201ENST00000456581 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
LINC00959-201ENST00000456581 MTHFSP49914 203 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 BRPF3Q9ULD4 1205 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 RGS3P49796 1198 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
LINC00959-201ENST00000456581 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
LINC00959-201ENST00000456581 CDK19Q9BWU1 502 aa16.19■□□□□ 0.18
LINC00959-201ENST00000456581 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 MS4A1P11836 297 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 TXNDC2Q86VQ3 553 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 METP08581 1390 aa16.18■□□□□ 0.18
LINC00959-201ENST00000456581 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
LINC00959-201ENST00000456581 RRP7AQ9Y3A4 280 aaKnown RBP16.17■□□□□ 0.18
LINC00959-201ENST00000456581 INSRP06213 1382 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 BCAR3O75815 825 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 FBLN1P23142 703 aa16.16■□□□□ 0.18
LINC00959-201ENST00000456581 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
LINC00959-201ENST00000456581 TNRQ92752 1358 aa16.14■□□□□ 0.17
LINC00959-201ENST00000456581 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
LINC00959-201ENST00000456581 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
LINC00959-201ENST00000456581 FYB1O15117 783 aa16.13■□□□□ 0.17
LINC00959-201ENST00000456581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.176e-7■■■■□ 23.8
LINC00959-201ENST00000456581 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
LINC00959-201ENST00000456581 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
LINC00959-201ENST00000456581 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
LINC00959-201ENST00000456581 LTKP29376 864 aa16.11■□□□□ 0.17
LINC00959-201ENST00000456581 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
LINC00959-201ENST00000456581 NRXN3Q9Y4C0 1643 aa16.11■□□□□ 0.17
LINC00959-201ENST00000456581 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
LINC00959-201ENST00000456581 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
LINC00959-201ENST00000456581 SETD1AO15047 1707 aaKnown RBP16.1■□□□□ 0.17
LINC00959-201ENST00000456581 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
LINC00959-201ENST00000456581 TERF2IPQ9NYB0 399 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 SHPRHQ149N8 1683 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
LINC00959-201ENST00000456581 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
LINC00959-201ENST00000456581 U2AF1L5P0DN76 240 aaPredicted RBP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 U2AF1Q01081 240 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 TCP11L2Q8N4U5 519 aa16.08■□□□□ 0.16
LINC00959-201ENST00000456581 FRAT2O75474 233 aaPredicted RBP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00959-201ENST00000456581 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
LINC00959-201ENST00000456581 TMEM2Q9UHN6 1383 aa16.07■□□□□ 0.16
LINC00959-201ENST00000456581 IGHDP01880 384 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms