RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 POTEAQ6S8J7 498 aa35.2■■■■□ 3.23
PPP1CB-208ENST00000455580 SHPRHQ149N8 1683 aa35.19■■■■□ 3.22
PPP1CB-208ENST00000455580 PLEKHH1Q9ULM0 1364 aa35.18■■■■□ 3.22
PPP1CB-208ENST00000455580 DHX57Q6P158 1386 aaKnown RBP35.17■■■■□ 3.22
PPP1CB-208ENST00000455580 LRP6O75581 1613 aa35.17■■■■□ 3.22
PPP1CB-208ENST00000455580 KNDC1Q76NI1 1749 aa35.15■■■■□ 3.22
PPP1CB-208ENST00000455580 CDC42BPGQ6DT37 1551 aa35.14■■■■□ 3.22
PPP1CB-208ENST00000455580 DCAF11Q8TEB1 546 aa35.14■■■■□ 3.22
PPP1CB-208ENST00000455580 STAC3Q96MF2 364 aa35.14■■■■□ 3.22
PPP1CB-208ENST00000455580 KDM2AQ9Y2K7 1162 aa35.14■■■■□ 3.22
PPP1CB-208ENST00000455580 MEX3CQ5U5Q3 659 aaKnown RBP35.12■■■■□ 3.21
PPP1CB-208ENST00000455580 LAMC1P11047 1609 aa35.12■■■■□ 3.21
PPP1CB-208ENST00000455580 SOS2Q07890 1332 aaPredicted RBP35.11■■■■□ 3.21
PPP1CB-208ENST00000455580 NUTM2BA6NNL0 878 aaPredicted RBP35.1■■■■□ 3.21
PPP1CB-208ENST00000455580 NUTM2EB1AL46 878 aaPredicted RBP35.1■■■■□ 3.21
PPP1CB-208ENST00000455580 ESCO1Q5FWF5 840 aa35.1■■■■□ 3.21
PPP1CB-208ENST00000455580 NUTM2AQ8IVF1 878 aaPredicted RBP35.1■■■■□ 3.21
PPP1CB-208ENST00000455580 PNPLA6Q8IY17 1366 aa35.07■■■■□ 3.2
PPP1CB-208ENST00000455580 NUTM2FA1L443 756 aa35.04■■■■□ 3.2
PPP1CB-208ENST00000455580 PRAM1Q96QH2 718 aa35.03■■■■□ 3.2
PPP1CB-208ENST00000455580 ZNF772Q68DY9 489 aaPredicted RBP35.01■■■■□ 3.2
PPP1CB-208ENST00000455580 NPHP3Q7Z494 1330 aa35.01■■■■□ 3.19
PPP1CB-208ENST00000455580 ADGRB1O14514 1584 aa35■■■■□ 3.19
PPP1CB-208ENST00000455580 DLC1Q96QB1 1528 aa34.99■■■■□ 3.19
PPP1CB-208ENST00000455580 FOXO3O43524 673 aa34.98■■■■□ 3.19
PPP1CB-208ENST00000455580 SAFB2Q14151 953 aaKnown RBP eCLIP34.98■■■■□ 3.19
PPP1CB-208ENST00000455580 POGKQ9P215 609 aa34.98■■■■□ 3.19
PPP1CB-208ENST00000455580 TRAK1Q9UPV9 953 aa34.97■■■■□ 3.19
PPP1CB-208ENST00000455580 FMN2Q9NZ56 1722 aa34.95■■■■□ 3.18
PPP1CB-208ENST00000455580 PXDNQ92626 1479 aa34.91■■■■□ 3.18
PPP1CB-208ENST00000455580 AFF2P51816 1311 aa34.9■■■■□ 3.18
PPP1CB-208ENST00000455580 XPCQ01831 940 aaPredicted RBP34.9■■■■□ 3.18
PPP1CB-208ENST00000455580 C8orf37Q96NL8 207 aa34.89■■■■□ 3.18
PPP1CB-208ENST00000455580 ADAMTS2O95450 1211 aa34.86■■■■□ 3.17
PPP1CB-208ENST00000455580 PHF8Q9UPP1 1060 aa34.86■■■■□ 3.17
PPP1CB-208ENST00000455580 KRT28Q7Z3Y7 464 aa34.83■■■■□ 3.17
PPP1CB-208ENST00000455580 NGLY1Q96IV0 654 aa34.82■■■■□ 3.16
PPP1CB-208ENST00000455580 HIRIP3Q9BW71 556 aaPredicted RBP34.82■■■■□ 3.16
PPP1CB-208ENST00000455580 COL22A1Q8NFW1 1626 aaPredicted RBP34.81■■■■□ 3.16
PPP1CB-208ENST00000455580 RXRBP28702 533 aa34.81■■■■□ 3.16
PPP1CB-208ENST00000455580 KIF1AQ12756 1690 aa34.81■■■■□ 3.16
PPP1CB-208ENST00000455580 MINK1Q8N4C8 1332 aaPredicted RBP34.81■■■■□ 3.16
PPP1CB-208ENST00000455580 ADGRB2O60241 1585 aa34.79■■■■□ 3.16
PPP1CB-208ENST00000455580 RGPD8O14715 1765 aaPredicted RBP34.79■■■■□ 3.16
PPP1CB-208ENST00000455580 SPATA31A3Q5VYP0 1347 aa34.79■■■■□ 3.16
PPP1CB-208ENST00000455580 ANKARQ7Z5J8 1434 aa34.78■■■■□ 3.16
PPP1CB-208ENST00000455580 QTRT2Q9H974 415 aaKnown RBP34.77■■■■□ 3.16
PPP1CB-208ENST00000455580 WASLO00401 505 aaPredicted RBP34.76■■■■□ 3.16
PPP1CB-208ENST00000455580 PSME1Q06323 249 aa34.76■■■■□ 3.16
PPP1CB-208ENST00000455580 NBPF1Q3BBV0 1214 aa34.73■■■■□ 3.15
PPP1CB-208ENST00000455580 PMFBP1Q8TBY8 1022 aa34.73■■■■□ 3.15
PPP1CB-208ENST00000455580 SIN3AQ96ST3 1273 aa34.73■■■■□ 3.15
PPP1CB-208ENST00000455580 FNBP4Q8N3X1 1017 aaPredicted RBP34.72■■■■□ 3.15
PPP1CB-208ENST00000455580 USP32Q8NFA0 1604 aa34.72■■■■□ 3.15
PPP1CB-208ENST00000455580 KIAA1210Q9ULL0 1709 aa34.71■■■■□ 3.15
PPP1CB-208ENST00000455580 PRR36Q9H6K5 1346 aa34.71■■■■□ 3.15
PPP1CB-208ENST00000455580 EIF3AQ14152 1382 aaKnown RBP34.71■■■■□ 3.15
PPP1CB-208ENST00000455580 L3MBTL2Q969R5 705 aa34.7■■■■□ 3.15
PPP1CB-208ENST00000455580 RBM6P78332 1123 aaKnown RBP34.69■■■■□ 3.14
PPP1CB-208ENST00000455580 USP21Q9UK80 565 aa34.69■■■■□ 3.14
PPP1CB-208ENST00000455580 SBNO1A3KN83 1393 aa34.68■■■■□ 3.14
PPP1CB-208ENST00000455580 ARHGEF28Q8N1W1 1705 aaKnown RBP34.68■■■■□ 3.14
PPP1CB-208ENST00000455580 CDK12Q9NYV4 1490 aaPredicted RBP34.67■■■■□ 3.14
PPP1CB-208ENST00000455580 TULP4Q9NRJ4 1543 aa34.65■■■■□ 3.14
PPP1CB-208ENST00000455580 TNS3Q68CZ2 1445 aa34.65■■■■□ 3.14
PPP1CB-208ENST00000455580 NEUROD1Q13562 356 aa34.63■■■■□ 3.13
PPP1CB-208ENST00000455580 TRPC5Q9UL62 973 aaPredicted RBP34.62■■■■□ 3.13
PPP1CB-208ENST00000455580 NUDT16Q96DE0 195 aaKnown RBP34.6■■■■□ 3.13
PPP1CB-208ENST00000455580 CDK19Q9BWU1 502 aa34.6■■■■□ 3.13
PPP1CB-208ENST00000455580 LMOD2Q6P5Q4 547 aa34.58■■■■□ 3.13
PPP1CB-208ENST00000455580 ARHGEF10O15013 1369 aa34.58■■■■□ 3.13
PPP1CB-208ENST00000455580 GPRASP1Q5JY77 1395 aa34.57■■■■□ 3.12
PPP1CB-208ENST00000455580 BCL9LQ86UU0 1499 aa34.57■■■■□ 3.12
PPP1CB-208ENST00000455580 NGDNQ8NEJ9 315 aaKnown RBP34.56■■■■□ 3.12
PPP1CB-208ENST00000455580 CABLES1Q8TDN4 633 aa34.56■■■■□ 3.12
PPP1CB-208ENST00000455580 MARF1Q9Y4F3 1742 aaKnown RBP34.55■■■■□ 3.12
PPP1CB-208ENST00000455580 ATRNO75882 1429 aa34.55■■■■□ 3.12
PPP1CB-208ENST00000455580 TRIM26Q12899 539 aaPredicted RBP34.54■■■■□ 3.12
PPP1CB-208ENST00000455580 HAP1P54257 671 aaPredicted RBP34.53■■■■□ 3.12
PPP1CB-208ENST00000455580 RGS12O14924 1447 aa34.53■■■■□ 3.12
PPP1CB-208ENST00000455580 ATP7BP35670 1465 aa34.52■■■■□ 3.12
PPP1CB-208ENST00000455580 UPF1Q92900 1129 aaKnown RBP eCLIP34.51■■■■□ 3.12
PPP1CB-208ENST00000455580 CENPJQ9HC77 1338 aaPredicted RBP34.51■■■■□ 3.11
PPP1CB-208ENST00000455580 PLEKHG5O94827 1062 aa34.5■■■■□ 3.11
PPP1CB-208ENST00000455580 CCDC61Q9Y6R9 512 aa34.49■■■■□ 3.11
PPP1CB-208ENST00000455580 TRPM3Q9HCF6 1732 aaPredicted RBP34.49■■■■□ 3.11
PPP1CB-208ENST00000455580 UNC5CLQ8IV45 518 aa34.48■■■■□ 3.11
PPP1CB-208ENST00000455580 SLIT2O94813 1529 aa34.48■■■■□ 3.11
PPP1CB-208ENST00000455580 PLEKHG3A1L390 1219 aa34.45■■■■□ 3.11
PPP1CB-208ENST00000455580 GJD4Q96KN9 370 aaPredicted RBP34.45■■■■□ 3.11
PPP1CB-208ENST00000455580 PAK3O75914 559 aaPredicted RBP34.43■■■■□ 3.1
PPP1CB-208ENST00000455580 ITSN1Q15811 1721 aa34.43■■■■□ 3.1
PPP1CB-208ENST00000455580 ALS2Q96Q42 1657 aa34.42■■■■□ 3.1
PPP1CB-208ENST00000455580 POLR3AO14802 1390 aaPredicted RBP34.41■■■■□ 3.1
PPP1CB-208ENST00000455580 ACEP12821 1306 aa34.41■■■■□ 3.1
PPP1CB-208ENST00000455580 NBPF8Q3BBV2 869 aa34.41■■■■□ 3.1
PPP1CB-208ENST00000455580 TRPM1Q7Z4N2 1603 aa34.41■■■■□ 3.1
PPP1CB-208ENST00000455580 FAM83GA6ND36 823 aa34.4■■■■□ 3.1
PPP1CB-208ENST00000455580 SRPK2P78362 688 aaKnown RBP34.4■■■■□ 3.1
PPP1CB-208ENST00000455580 ROCK2O75116 1388 aaKnown RBP34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms