RNA–Protein interactions for RNA: ENST00000454740.5

RC3H2-206, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5

Gene RC3H2, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-206ENST00000454740 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
RC3H2-206ENST00000454740 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
RC3H2-206ENST00000454740 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
RC3H2-206ENST00000454740 TSR3Q9UJK0 312 aaKnown RBP12.54□□□□□ -0.4
RC3H2-206ENST00000454740 FBXO31Q5XUX0 539 aaPredicted RBP12.53□□□□□ -0.4
RC3H2-206ENST00000454740 SAMD7Q7Z3H4 446 aa12.53□□□□□ -0.4
RC3H2-206ENST00000454740 AP1G2O75843 785 aa12.52□□□□□ -0.41
RC3H2-206ENST00000454740 NDUFV2P19404 249 aa12.52□□□□□ -0.41
RC3H2-206ENST00000454740 NYAP1Q6ZVC0 841 aa12.52□□□□□ -0.41
RC3H2-206ENST00000454740 SOCS7O14512 581 aa12.51□□□□□ -0.41
RC3H2-206ENST00000454740 LILRB3O75022 631 aa12.51□□□□□ -0.41
RC3H2-206ENST00000454740 KDM4AO75164 1064 aa12.51□□□□□ -0.41
RC3H2-206ENST00000454740 MTMR14Q8NCE2 650 aa12.51□□□□□ -0.41
RC3H2-206ENST00000454740 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
RC3H2-206ENST00000454740 ITGBL1O95965 494 aaPredicted RBP12.5□□□□□ -0.41
RC3H2-206ENST00000454740 USP46P62068 366 aa12.5□□□□□ -0.41
RC3H2-206ENST00000454740 QPCTQ16769 361 aa12.5□□□□□ -0.41
RC3H2-206ENST00000454740 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
RC3H2-206ENST00000454740 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
RC3H2-206ENST00000454740 HRCP23327 699 aa12.48□□□□□ -0.41
RC3H2-206ENST00000454740 ABL2P42684 1182 aa12.48□□□□□ -0.41
RC3H2-206ENST00000454740 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
RC3H2-206ENST00000454740 A0A0G2JS52 829 aa12.47□□□□□ -0.41
RC3H2-206ENST00000454740 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
RC3H2-206ENST00000454740 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
RC3H2-206ENST00000454740 PPP4CP60510 307 aa12.46□□□□□ -0.41
RC3H2-206ENST00000454740 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
RC3H2-206ENST00000454740 GCGRP47871 477 aa12.45□□□□□ -0.42
RC3H2-206ENST00000454740 SLC4A3P48751 1232 aa12.45□□□□□ -0.42
RC3H2-206ENST00000454740 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
RC3H2-206ENST00000454740 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
RC3H2-206ENST00000454740 CALR3Q96L12 384 aaKnown RBP12.44□□□□□ -0.42
RC3H2-206ENST00000454740 FDX1P10109 184 aa12.43□□□□□ -0.42
RC3H2-206ENST00000454740 HOXA2O43364 376 aa12.42□□□□□ -0.42
RC3H2-206ENST00000454740 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
RC3H2-206ENST00000454740 KCNC4Q03721 635 aa12.41□□□□□ -0.42
RC3H2-206ENST00000454740 RNF40O75150 1001 aa12.4□□□□□ -0.42
RC3H2-206ENST00000454740 SWT1Q5T5J6 900 aaKnown RBP12.4□□□□□ -0.42
RC3H2-206ENST00000454740 NDUFB9Q9Y6M9 179 aa12.4□□□□□ -0.42
RC3H2-206ENST00000454740 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
RC3H2-206ENST00000454740 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
RC3H2-206ENST00000454740 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
RC3H2-206ENST00000454740 MTMR2Q13614 643 aa12.36□□□□□ -0.43
RC3H2-206ENST00000454740 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
RC3H2-206ENST00000454740 GLMNQ92990 594 aa12.36□□□□□ -0.43
RC3H2-206ENST00000454740 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
RC3H2-206ENST00000454740 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
RC3H2-206ENST00000454740 RGS20O76081 388 aa12.35□□□□□ -0.43
RC3H2-206ENST00000454740 SLC10A3P09131 477 aa12.35□□□□□ -0.43
RC3H2-206ENST00000454740 APLP1P51693 650 aa12.35□□□□□ -0.43
RC3H2-206ENST00000454740 TSC1Q92574 1164 aa12.35□□□□□ -0.43
RC3H2-206ENST00000454740 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
RC3H2-206ENST00000454740 POM121CA8CG34 1229 aa12.33□□□□□ -0.44
RC3H2-206ENST00000454740 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
RC3H2-206ENST00000454740 KCTD17Q8N5Z5 321 aa12.33□□□□□ -0.44
RC3H2-206ENST00000454740 PCDHGC3Q9UN70 934 aa12.33□□□□□ -0.44
RC3H2-206ENST00000454740 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
RC3H2-206ENST00000454740 GUCA2AQ02747 115 aa12.32□□□□□ -0.44
RC3H2-206ENST00000454740 CTDSPL2Q05D32 466 aa12.32□□□□□ -0.44
RC3H2-206ENST00000454740 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
RC3H2-206ENST00000454740 MTRQ99707 1265 aa12.32□□□□□ -0.44
RC3H2-206ENST00000454740 C6orf229H3BNL8 230 aa12.31□□□□□ -0.44
RC3H2-206ENST00000454740 PDE4CQ08493 712 aa12.3□□□□□ -0.44
RC3H2-206ENST00000454740 HLA-CQ95604 372 aa12.29□□□□□ -0.44
RC3H2-206ENST00000454740 CCDC9Q9Y3X0 531 aaKnown RBP12.29□□□□□ -0.44
RC3H2-206ENST00000454740 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
RC3H2-206ENST00000454740 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
RC3H2-206ENST00000454740 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
RC3H2-206ENST00000454740 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
RC3H2-206ENST00000454740 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
RC3H2-206ENST00000454740 FUT2Q10981 343 aa12.27□□□□□ -0.45
RC3H2-206ENST00000454740 CFHP08603 1231 aa12.26□□□□□ -0.45
RC3H2-206ENST00000454740 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
RC3H2-206ENST00000454740 IRF5Q13568 498 aa12.26□□□□□ -0.45
RC3H2-206ENST00000454740 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
RC3H2-206ENST00000454740 AEBP1Q8IUX7 1158 aa12.25□□□□□ -0.45
RC3H2-206ENST00000454740 KMT5BQ4FZB7 885 aa12.24□□□□□ -0.45
RC3H2-206ENST00000454740 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
RC3H2-206ENST00000454740 TRIM34Q9BYJ4 488 aa12.24□□□□□ -0.45
RC3H2-206ENST00000454740 CFAP99D6REC4 459 aa12.23□□□□□ -0.45
RC3H2-206ENST00000454740 COPS2P61201 443 aa12.22□□□□□ -0.45
RC3H2-206ENST00000454740 VAC14Q08AM6 782 aa12.21□□□□□ -0.45
RC3H2-206ENST00000454740 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
RC3H2-206ENST00000454740 NKX2-3Q8TAU0 364 aa12.21□□□□□ -0.45
RC3H2-206ENST00000454740 PRR7Q8TB68 274 aa12.21□□□□□ -0.45
RC3H2-206ENST00000454740 PBXIP1Q96AQ6 731 aa12.21□□□□□ -0.45
RC3H2-206ENST00000454740 RFX1P22670 979 aa12.18□□□□□ -0.46
RC3H2-206ENST00000454740 SOX11P35716 441 aa12.18□□□□□ -0.46
RC3H2-206ENST00000454740 Q3C1V9 767 aa12.18□□□□□ -0.46
RC3H2-206ENST00000454740 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
RC3H2-206ENST00000454740 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
RC3H2-206ENST00000454740 SYMPKQ92797 1274 aaKnown RBP12.18□□□□□ -0.46
RC3H2-206ENST00000454740 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
RC3H2-206ENST00000454740 RETREG3Q86VR2 466 aa12.17□□□□□ -0.46
RC3H2-206ENST00000454740 ADAMTS19Q8TE59 1207 aa12.17□□□□□ -0.46
RC3H2-206ENST00000454740 PCDHB3Q9Y5E6 796 aa12.17□□□□□ -0.46
RC3H2-206ENST00000454740 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
RC3H2-206ENST00000454740 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
RC3H2-206ENST00000454740 SEMA3FQ13275 785 aa12.15□□□□□ -0.46
RC3H2-206ENST00000454740 NR6A1Q15406 480 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms