RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 HDGFP51858 240 aaKnown RBP29.06■■■□□ 2.24
NPAS1-202ENST00000449844 PPP2R1AP30153 589 aa29.05■■■□□ 2.24
NPAS1-202ENST00000449844 TMEM2Q9UHN6 1383 aa29.03■■■□□ 2.24
NPAS1-202ENST00000449844 SAFB2Q14151 953 aaKnown RBP eCLIP29.03■■■□□ 2.24
NPAS1-202ENST00000449844 SENP3-EIF4A1A0A087X0R7 540 aa29.02■■■□□ 2.24
NPAS1-202ENST00000449844 PUS7Q96PZ0 661 aaKnown RBP29.01■■■□□ 2.23
NPAS1-202ENST00000449844 PRAM1Q96QH2 718 aa29■■■□□ 2.23
NPAS1-202ENST00000449844 POGKQ9P215 609 aa29■■■□□ 2.23
NPAS1-202ENST00000449844 DLC1Q96QB1 1528 aa29■■■□□ 2.23
NPAS1-202ENST00000449844 PLPPR3Q6T4P5 718 aa28.99■■■□□ 2.23
NPAS1-202ENST00000449844 CARD14Q9BXL6 1004 aa28.94■■■□□ 2.22
NPAS1-202ENST00000449844 RIMS1Q86UR5 1692 aaKnown RBP28.94■■■□□ 2.22
NPAS1-202ENST00000449844 MINK1Q8N4C8 1332 aaPredicted RBP28.94■■■□□ 2.22
NPAS1-202ENST00000449844 B4GALNT3Q6L9W6 998 aa28.93■■■□□ 2.22
NPAS1-202ENST00000449844 SLC12A5Q9H2X9 1139 aa28.93■■■□□ 2.22
NPAS1-202ENST00000449844 WDR43Q15061 677 aaKnown RBP eCLIP28.93■■■□□ 2.22
NPAS1-202ENST00000449844 KNDC1Q76NI1 1749 aa28.92■■■□□ 2.22
NPAS1-202ENST00000449844 CABP2Q9NPB3 220 aa28.92■■■□□ 2.22
NPAS1-202ENST00000449844 ADAMTS8Q9UP79 889 aa28.92■■■□□ 2.22
NPAS1-202ENST00000449844 RBM19Q9Y4C8 960 aaKnown RBP28.92■■■□□ 2.22
NPAS1-202ENST00000449844 ABCC11Q96J66 1382 aa28.92■■■□□ 2.22
NPAS1-202ENST00000449844 SALL2Q9Y467 1007 aaPredicted RBP28.91■■■□□ 2.22
NPAS1-202ENST00000449844 NSD3Q9BZ95 1437 aa28.91■■■□□ 2.22
NPAS1-202ENST00000449844 METP08581 1390 aa28.91■■■□□ 2.22
NPAS1-202ENST00000449844 SRPK2P78362 688 aaKnown RBP28.89■■■□□ 2.22
NPAS1-202ENST00000449844 RCAN3Q9UKA8 241 aa28.89■■■□□ 2.22
NPAS1-202ENST00000449844 USP32Q8NFA0 1604 aa28.89■■■□□ 2.22
NPAS1-202ENST00000449844 PLEKHG1Q9ULL1 1385 aa28.88■■■□□ 2.21
NPAS1-202ENST00000449844 SLIT1O75093 1534 aa28.88■■■□□ 2.21
NPAS1-202ENST00000449844 NINLQ9Y2I6 1382 aa28.88■■■□□ 2.21
NPAS1-202ENST00000449844 ATAD2Q6PL18 1390 aa28.87■■■□□ 2.21
NPAS1-202ENST00000449844 RRP1P56182 461 aaKnown RBP28.87■■■□□ 2.21
NPAS1-202ENST00000449844 ANKRD36BQ8N2N9 1353 aa28.87■■■□□ 2.21
NPAS1-202ENST00000449844 ARHGAP23Q9P227 1491 aa28.86■■■□□ 2.21
NPAS1-202ENST00000449844 LTKP29376 864 aa28.85■■■□□ 2.21
NPAS1-202ENST00000449844 ADAMTS13Q76LX8 1427 aa28.84■■■□□ 2.21
NPAS1-202ENST00000449844 TXNDC2Q86VQ3 553 aa28.84■■■□□ 2.21
NPAS1-202ENST00000449844 EID1Q9Y6B2 187 aa28.84■■■□□ 2.21
NPAS1-202ENST00000449844 PLEKHH1Q9ULM0 1364 aa28.84■■■□□ 2.21
NPAS1-202ENST00000449844 ADAMTSL3P82987 1691 aa28.84■■■□□ 2.21
NPAS1-202ENST00000449844 CPS1P31327 1500 aa28.84■■■□□ 2.21
NPAS1-202ENST00000449844 WAPLQ7Z5K2 1190 aa28.83■■■□□ 2.21
NPAS1-202ENST00000449844 CDCA7LQ96GN5 454 aa28.83■■■□□ 2.21
NPAS1-202ENST00000449844 TECPR2O15040 1411 aa28.83■■■□□ 2.21
NPAS1-202ENST00000449844 THEMISQ8N1K5 641 aaPredicted RBP28.8■■■□□ 2.2
NPAS1-202ENST00000449844 CDK19Q9BWU1 502 aa28.8■■■□□ 2.2
NPAS1-202ENST00000449844 FAM135BQ49AJ0 1406 aa28.8■■■□□ 2.2
NPAS1-202ENST00000449844 CEP170BQ9Y4F5 1589 aaPredicted RBP28.8■■■□□ 2.2
NPAS1-202ENST00000449844 CCDC136Q96JN2 1154 aa28.79■■■□□ 2.2
NPAS1-202ENST00000449844 CGNL1Q0VF96 1302 aa28.78■■■□□ 2.2
NPAS1-202ENST00000449844 SIRT1Q96EB6 747 aa28.77■■■□□ 2.2
NPAS1-202ENST00000449844 A0A1W2PP64 1363 aa28.76■■■□□ 2.19
NPAS1-202ENST00000449844 MED14O60244 1454 aa28.75■■■□□ 2.19
NPAS1-202ENST00000449844 ZNF521Q96K83 1311 aa28.74■■■□□ 2.19
NPAS1-202ENST00000449844 POLR3AO14802 1390 aaPredicted RBP28.74■■■□□ 2.19
NPAS1-202ENST00000449844 NSD2O96028 1365 aa28.72■■■□□ 2.19
NPAS1-202ENST00000449844 MORC1Q86VD1 984 aa28.72■■■□□ 2.19
NPAS1-202ENST00000449844 TERF2IPQ9NYB0 399 aa28.72■■■□□ 2.19
NPAS1-202ENST00000449844 ZNF142P52746 1687 aaPredicted RBP28.71■■■□□ 2.19
NPAS1-202ENST00000449844 DIP2AQ14689 1571 aa28.71■■■□□ 2.19
NPAS1-202ENST00000449844 CD163L1Q9NR16 1453 aa28.7■■■□□ 2.19
NPAS1-202ENST00000449844 NGEFQ8N5V2 710 aa28.7■■■□□ 2.18
NPAS1-202ENST00000449844 SLC26A8Q96RN1 970 aa28.69■■■□□ 2.18
NPAS1-202ENST00000449844 ROBO2Q9HCK4 1378 aa28.68■■■□□ 2.18
NPAS1-202ENST00000449844 WASLO00401 505 aaPredicted RBP28.67■■■□□ 2.18
NPAS1-202ENST00000449844 GOLGA2Q08379 1002 aa28.67■■■□□ 2.18
NPAS1-202ENST00000449844 HDGFL2Q7Z4V5 671 aaPredicted RBP28.67■■■□□ 2.18
NPAS1-202ENST00000449844 CABP1Q9NZU7 370 aa28.65■■■□□ 2.18
NPAS1-202ENST00000449844 ANKRD26Q9UPS8 1709 aa28.65■■■□□ 2.18
NPAS1-202ENST00000449844 PTPRUQ92729 1446 aa28.65■■■□□ 2.18
NPAS1-202ENST00000449844 ATP7BP35670 1465 aa28.65■■■□□ 2.18
NPAS1-202ENST00000449844 DUSP27Q5VZP5 1158 aa28.65■■■□□ 2.18
NPAS1-202ENST00000449844 EXOC6Q8TAG9 804 aa28.65■■■□□ 2.18
NPAS1-202ENST00000449844 TBX22Q9Y458 520 aa28.65■■■□□ 2.18
NPAS1-202ENST00000449844 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.18
NPAS1-202ENST00000449844 ADGRB2O60241 1585 aa28.64■■■□□ 2.17
NPAS1-202ENST00000449844 TNNT2P45379 298 aaPredicted RBP28.62■■■□□ 2.17
NPAS1-202ENST00000449844 KIF20BQ96Q89 1820 aa28.62■■■□□ 2.17
NPAS1-202ENST00000449844 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.62■■■□□ 2.17
NPAS1-202ENST00000449844 FANCIQ9NVI1 1328 aa28.62■■■□□ 2.17
NPAS1-202ENST00000449844 CCDC146Q8IYE0 955 aa28.61■■■□□ 2.17
NPAS1-202ENST00000449844 SLFN5Q08AF3 891 aa28.6■■■□□ 2.17
NPAS1-202ENST00000449844 PPIP5K1Q6PFW1 1433 aa28.6■■■□□ 2.17
NPAS1-202ENST00000449844 APAF1O14727 1248 aa28.59■■■□□ 2.17
NPAS1-202ENST00000449844 SHPRHQ149N8 1683 aa28.58■■■□□ 2.17
NPAS1-202ENST00000449844 TRMT2AQ8IZ69 625 aaKnown RBP28.58■■■□□ 2.17
NPAS1-202ENST00000449844 AMOTL2Q9Y2J4 779 aa28.58■■■□□ 2.17
NPAS1-202ENST00000449844 PTCH1Q13635 1447 aa28.57■■■□□ 2.16
NPAS1-202ENST00000449844 XRN1Q8IZH2 1706 aaKnown RBP28.56■■■□□ 2.16
NPAS1-202ENST00000449844 NUDT16Q96DE0 195 aaKnown RBP28.56■■■□□ 2.16
NPAS1-202ENST00000449844 CDC42BPGQ6DT37 1551 aa28.55■■■□□ 2.16
NPAS1-202ENST00000449844 GGNBP2Q9H3C7 697 aa28.55■■■□□ 2.16
NPAS1-202ENST00000449844 ITSN1Q15811 1721 aa28.54■■■□□ 2.16
NPAS1-202ENST00000449844 FYB1O15117 783 aa28.53■■■□□ 2.16
NPAS1-202ENST00000449844 ANKLE2Q86XL3 938 aa28.53■■■□□ 2.16
NPAS1-202ENST00000449844 CFAP53Q96M91 514 aa28.53■■■□□ 2.16
NPAS1-202ENST00000449844 MYT1Q01538 1121 aa28.52■■■□□ 2.16
NPAS1-202ENST00000449844 E9PSI1 815 aa28.52■■■□□ 2.16
NPAS1-202ENST00000449844 PLIN1O60240 522 aa28.52■■■□□ 2.16
NPAS1-202ENST00000449844 CCDC61Q9Y6R9 512 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms