RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ABCC5O15440 1437 aa12.75□□□□□ -0.37
CTC1-202ENST00000449476 IFIT2P09913 472 aaKnown RBP12.75□□□□□ -0.37
CTC1-202ENST00000449476 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
CTC1-202ENST00000449476 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
CTC1-202ENST00000449476 H3BQV1 296 aa12.74□□□□□ -0.37
CTC1-202ENST00000449476 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
CTC1-202ENST00000449476 FAM184AQ8NB25 1140 aa12.74□□□□□ -0.37
CTC1-202ENST00000449476 NLRP6P59044 892 aa12.74□□□□□ -0.37
CTC1-202ENST00000449476 CCDC34Q96HJ3 373 aa12.74□□□□□ -0.37
CTC1-202ENST00000449476 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
CTC1-202ENST00000449476 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
CTC1-202ENST00000449476 CDC45O75419 566 aa12.73□□□□□ -0.37
CTC1-202ENST00000449476 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
CTC1-202ENST00000449476 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
CTC1-202ENST00000449476 NUCB2P80303 420 aa12.72□□□□□ -0.37
CTC1-202ENST00000449476 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
CTC1-202ENST00000449476 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
CTC1-202ENST00000449476 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
CTC1-202ENST00000449476 SLC52A1Q9NWF4 448 aa12.72□□□□□ -0.37
CTC1-202ENST00000449476 G3BP1Q13283 466 aaKnown RBP eCLIP12.71□□□□□ -0.37
CTC1-202ENST00000449476 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.37
CTC1-202ENST00000449476 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.38
CTC1-202ENST00000449476 HSP90AB4PQ58FF6 505 aa12.71□□□□□ -0.38
CTC1-202ENST00000449476 PLB1Q6P1J6 1458 aa12.71□□□□□ -0.38
CTC1-202ENST00000449476 CUL7Q14999 1698 aa12.71□□□□□ -0.38
CTC1-202ENST00000449476 CDK19Q9BWU1 502 aa12.7□□□□□ -0.38
CTC1-202ENST00000449476 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
CTC1-202ENST00000449476 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
CTC1-202ENST00000449476 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
CTC1-202ENST00000449476 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
CTC1-202ENST00000449476 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
CTC1-202ENST00000449476 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
CTC1-202ENST00000449476 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
CTC1-202ENST00000449476 RAPGEF3O95398 923 aa12.69□□□□□ -0.38
CTC1-202ENST00000449476 C1orf115Q9H7X2 142 aa12.69□□□□□ -0.38
CTC1-202ENST00000449476 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
CTC1-202ENST00000449476 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
CTC1-202ENST00000449476 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
CTC1-202ENST00000449476 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
CTC1-202ENST00000449476 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
CTC1-202ENST00000449476 GNAI3P08754 354 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 RNF20Q5VTR2 975 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 MCTP1Q6DN14 999 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 RAPGEF4Q8WZA2 1011 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 EVA1CP58658 441 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
CTC1-202ENST00000449476 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
CTC1-202ENST00000449476 RPGRIP1LQ68CZ1 1315 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 ERC2O15083 957 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
CTC1-202ENST00000449476 SULT6B1Q6IMI4 303 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 LAMC3Q9Y6N6 1575 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 BECN2A8MW95 431 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
CTC1-202ENST00000449476 RPRD2Q5VT52 1461 aaKnown RBP12.67□□□□□ -0.38
CTC1-202ENST00000449476 VPS37CA5D8V6 355 aaPredicted RBP12.66□□□□□ -0.38
CTC1-202ENST00000449476 AIMP1Q12904 312 aaKnown RBP12.66□□□□□ -0.38
CTC1-202ENST00000449476 CCDC30Q5VVM6 783 aa12.66□□□□□ -0.38
CTC1-202ENST00000449476 ABTB2Q8N961 1025 aa12.66□□□□□ -0.38
CTC1-202ENST00000449476 BIVM-ERCC5R4GMW8 1640 aa12.65□□□□□ -0.38
CTC1-202ENST00000449476 SURF6O75683 361 aaKnown RBP12.65□□□□□ -0.38
CTC1-202ENST00000449476 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
CTC1-202ENST00000449476 RIC3Q7Z5B4 369 aa12.65□□□□□ -0.38
CTC1-202ENST00000449476 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
CTC1-202ENST00000449476 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.38
CTC1-202ENST00000449476 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
CTC1-202ENST00000449476 TRAK2O60296 914 aa12.65□□□□□ -0.39
CTC1-202ENST00000449476 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
CTC1-202ENST00000449476 CREBRFQ8IUR6 639 aa12.64□□□□□ -0.39
CTC1-202ENST00000449476 CLASRPQ8N2M8 674 aaKnown RBP12.64□□□□□ -0.39
CTC1-202ENST00000449476 ATAD2Q6PL18 1390 aa12.64□□□□□ -0.39
CTC1-202ENST00000449476 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
CTC1-202ENST00000449476 MRE11P49959 708 aa12.63□□□□□ -0.39
CTC1-202ENST00000449476 NEK4P51957 841 aa12.63□□□□□ -0.39
CTC1-202ENST00000449476 BICD2Q8TD16 824 aa12.63□□□□□ -0.39
CTC1-202ENST00000449476 GRIN2AQ12879 1464 aa12.63□□□□□ -0.39
CTC1-202ENST00000449476 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
CTC1-202ENST00000449476 CPLX1O14810 134 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 TMPOP42166 694 aaKnown RBP12.62□□□□□ -0.39
CTC1-202ENST00000449476 FCHSD2O94868 740 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 RTEL1-TNFRSF6BF6WH68 1400 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 APPP05067 770 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 SYNE3Q6ZMZ3 975 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
CTC1-202ENST00000449476 MSH5O43196 834 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 GNAI2P04899 355 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 RABEP1Q15276 862 aa12.62□□□□□ -0.39
CTC1-202ENST00000449476 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
CTC1-202ENST00000449476 AKAP17AQ02040 695 aaKnown RBP12.61□□□□□ -0.39
CTC1-202ENST00000449476 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
CTC1-202ENST00000449476 CLSTN1O94985 981 aa12.61□□□□□ -0.39
CTC1-202ENST00000449476 CNTROBQ8N137 903 aa12.61□□□□□ -0.39
CTC1-202ENST00000449476 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
CTC1-202ENST00000449476 TRDNQ13061 729 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms