RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
CNOT3-204ENST00000447684 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
CNOT3-204ENST00000447684 MADDQ8WXG6 1647 aa20.17■□□□□ 0.82
CNOT3-204ENST00000447684 MSNP26038 577 aaKnown RBP20.17■□□□□ 0.82
CNOT3-204ENST00000447684 RARSP54136 660 aaKnown RBP20.17■□□□□ 0.82
CNOT3-204ENST00000447684 GBP4Q96PP9 640 aa20.17■□□□□ 0.82
CNOT3-204ENST00000447684 ZMYM3Q14202 1370 aa20.16■□□□□ 0.82
CNOT3-204ENST00000447684 NGEFQ8N5V2 710 aa20.15■□□□□ 0.82
CNOT3-204ENST00000447684 NASPP49321 788 aaPredicted RBP20.14■□□□□ 0.82
CNOT3-204ENST00000447684 ZNF692Q9BU19 519 aaPredicted RBP20.14■□□□□ 0.82
CNOT3-204ENST00000447684 JPH4Q96JJ6 628 aa20.14■□□□□ 0.81
CNOT3-204ENST00000447684 R3HCC1Q9Y3T6 440 aaKnown RBP20.13■□□□□ 0.81
CNOT3-204ENST00000447684 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
CNOT3-204ENST00000447684 ZSCAN30Q86W11 494 aa20.12■□□□□ 0.81
CNOT3-204ENST00000447684 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
CNOT3-204ENST00000447684 TNNT2P45379 298 aaPredicted RBP20.12■□□□□ 0.81
CNOT3-204ENST00000447684 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
CNOT3-204ENST00000447684 CCDC173Q0VFZ6 552 aa20.12■□□□□ 0.81
CNOT3-204ENST00000447684 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
CNOT3-204ENST00000447684 A0A0U1RQG5 324 aaPredicted RBP20.11■□□□□ 0.81
CNOT3-204ENST00000447684 CALD1Q05682 793 aaKnown RBP20.11■□□□□ 0.81
CNOT3-204ENST00000447684 AAMPQ13685 434 aa20.09■□□□□ 0.81
CNOT3-204ENST00000447684 OFD1O75665 1012 aa20.09■□□□□ 0.81
CNOT3-204ENST00000447684 RIPK4P57078 832 aa20.09■□□□□ 0.81
CNOT3-204ENST00000447684 SKOR2Q2VWA4 1001 aaPredicted RBP20.09■□□□□ 0.81
CNOT3-204ENST00000447684 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.09■□□□□ 0.81
CNOT3-204ENST00000447684 SCAPERQ9BY12 1400 aa20.08■□□□□ 0.81
CNOT3-204ENST00000447684 KDM5AP29375 1690 aaKnown RBP20.08■□□□□ 0.81
CNOT3-204ENST00000447684 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
CNOT3-204ENST00000447684 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
CNOT3-204ENST00000447684 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
CNOT3-204ENST00000447684 DDX49Q9Y6V7 483 aaKnown RBP20.06■□□□□ 0.8
CNOT3-204ENST00000447684 DUOX2Q9NRD8 1548 aa20.06■□□□□ 0.8
CNOT3-204ENST00000447684 MVPQ14764 893 aaKnown RBP20.05■□□□□ 0.8
CNOT3-204ENST00000447684 PRDM4Q9UKN5 801 aa20.05■□□□□ 0.8
CNOT3-204ENST00000447684 CEP152O94986 1710 aa20.04■□□□□ 0.8
CNOT3-204ENST00000447684 RAB3GAP1Q15042 981 aa20.04■□□□□ 0.8
CNOT3-204ENST00000447684 GOLGA6L22H0YM25 854 aa20.04■□□□□ 0.8
CNOT3-204ENST00000447684 TTC37Q6PGP7 1564 aa20.03■□□□□ 0.8
CNOT3-204ENST00000447684 XPCQ01831 940 aaPredicted RBP20.03■□□□□ 0.8
CNOT3-204ENST00000447684 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
CNOT3-204ENST00000447684 ARHGAP5Q13017 1502 aa20.03■□□□□ 0.8
CNOT3-204ENST00000447684 SSFA2P28290 1259 aa20.03■□□□□ 0.8
CNOT3-204ENST00000447684 DDIT3P35638 169 aa20.02■□□□□ 0.8
CNOT3-204ENST00000447684 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
CNOT3-204ENST00000447684 SMC5Q8IY18 1101 aa20.02■□□□□ 0.8
CNOT3-204ENST00000447684 DZIP1LQ8IYY4 767 aaKnown RBP20.02■□□□□ 0.8
CNOT3-204ENST00000447684 PPP1R9BQ96SB3 815 aa20.02■□□□□ 0.8
CNOT3-204ENST00000447684 UQCRHLA0A096LP55 91 aa20.01■□□□□ 0.79
CNOT3-204ENST00000447684 UQCRHP07919 91 aa20.01■□□□□ 0.79
CNOT3-204ENST00000447684 PRDM10Q9NQV6 1147 aa20.01■□□□□ 0.79
CNOT3-204ENST00000447684 CIZ1Q9ULV3 898 aaPredicted RBP20.01■□□□□ 0.79
CNOT3-204ENST00000447684 FBLN2P98095 1184 aa20■□□□□ 0.79
CNOT3-204ENST00000447684 ZKSCAN2Q63HK3 967 aa20■□□□□ 0.79
CNOT3-204ENST00000447684 ZBTB7CA1YPR0 619 aa20■□□□□ 0.79
CNOT3-204ENST00000447684 LNPKQ9C0E8 428 aa20■□□□□ 0.79
CNOT3-204ENST00000447684 POLR3AO14802 1390 aaPredicted RBP19.99■□□□□ 0.79
CNOT3-204ENST00000447684 CD2BP2O95400 341 aaKnown RBP19.99■□□□□ 0.79
CNOT3-204ENST00000447684 PTMSP20962 102 aa19.99■□□□□ 0.79
CNOT3-204ENST00000447684 SNX21Q969T3 373 aa19.98■□□□□ 0.79
CNOT3-204ENST00000447684 STAC3Q96MF2 364 aa19.98■□□□□ 0.79
CNOT3-204ENST00000447684 TRPM2O94759 1503 aa19.98■□□□□ 0.79
CNOT3-204ENST00000447684 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
CNOT3-204ENST00000447684 MAP7D2Q96T17 732 aa19.97■□□□□ 0.79
CNOT3-204ENST00000447684 RBM42Q9BTD8 480 aaKnown RBP19.97■□□□□ 0.79
CNOT3-204ENST00000447684 SMC4Q9NTJ3 1288 aa19.97■□□□□ 0.79
CNOT3-204ENST00000447684 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
CNOT3-204ENST00000447684 KIAA1210Q9ULL0 1709 aa19.97■□□□□ 0.79
CNOT3-204ENST00000447684 CAVIN1Q6NZI2 390 aaKnown RBP19.97■□□□□ 0.79
CNOT3-204ENST00000447684 NCOA3Q9Y6Q9 1424 aa19.97■□□□□ 0.79
CNOT3-204ENST00000447684 SHPRHQ149N8 1683 aa19.97■□□□□ 0.79
CNOT3-204ENST00000447684 CARD14Q9BXL6 1004 aa19.96■□□□□ 0.79
CNOT3-204ENST00000447684 RBM25P49756 843 aaKnown RBP19.96■□□□□ 0.79
CNOT3-204ENST00000447684 ZHX1Q9UKY1 873 aaPredicted RBP19.96■□□□□ 0.79
CNOT3-204ENST00000447684 IQSEC2Q5JU85 1478 aa19.95■□□□□ 0.78
CNOT3-204ENST00000447684 TSR2Q969E8 191 aaKnown RBP19.95■□□□□ 0.78
CNOT3-204ENST00000447684 ERVK-7P63135 1459 aa19.95■□□□□ 0.78
CNOT3-204ENST00000447684 MCTP1Q6DN14 999 aa19.95■□□□□ 0.78
CNOT3-204ENST00000447684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.783e-6■■■■□ 22.7
CNOT3-204ENST00000447684 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
CNOT3-204ENST00000447684 K7ELQ4 463 aaPredicted RBP19.93■□□□□ 0.78
CNOT3-204ENST00000447684 KLHL40Q2TBA0 621 aa19.93■□□□□ 0.78
CNOT3-204ENST00000447684 GAS2L2Q8NHY3 880 aa19.93■□□□□ 0.78
CNOT3-204ENST00000447684 BAG4O95429 457 aaKnown RBP19.93■□□□□ 0.78
CNOT3-204ENST00000447684 CLTCL1P53675 1640 aa19.92■□□□□ 0.78
CNOT3-204ENST00000447684 SLC24A1O60721 1099 aa19.92■□□□□ 0.78
CNOT3-204ENST00000447684 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
CNOT3-204ENST00000447684 TRIM27P14373 513 aa19.91■□□□□ 0.78
CNOT3-204ENST00000447684 WDR63Q8IWG1 891 aa19.91■□□□□ 0.78
CNOT3-204ENST00000447684 TERF1P54274 439 aa19.91■□□□□ 0.78
CNOT3-204ENST00000447684 HDAC1Q13547 482 aaPredicted RBP19.9■□□□□ 0.78
CNOT3-204ENST00000447684 RBSNQ9H1K0 784 aa19.9■□□□□ 0.78
CNOT3-204ENST00000447684 DDX19BQ9UMR2 479 aa19.9■□□□□ 0.78
CNOT3-204ENST00000447684 NOL7Q9UMY1 257 aaKnown RBP19.89■□□□□ 0.78
CNOT3-204ENST00000447684 PTPRTO14522 1441 aa19.89■□□□□ 0.78
CNOT3-204ENST00000447684 KANK1Q14678 1352 aa19.89■□□□□ 0.77
CNOT3-204ENST00000447684 ZSCAN23Q3MJ62 389 aa19.89■□□□□ 0.77
CNOT3-204ENST00000447684 KIF2CQ99661 725 aa19.88■□□□□ 0.77
CNOT3-204ENST00000447684 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
CNOT3-204ENST00000447684 EXOSC9Q06265 439 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms