RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 GBP4Q96PP9 640 aa21.28■■□□□ 1
UBXN2A-203ENST00000446425 IFT140Q96RY7 1462 aa21.28■■□□□ 1
UBXN2A-203ENST00000446425 CCDC173Q0VFZ6 552 aa21.27■■□□□ 1
UBXN2A-203ENST00000446425 SMC5Q8IY18 1101 aa21.27■■□□□ 1
UBXN2A-203ENST00000446425 WDR63Q8IWG1 891 aa21.26■□□□□ 0.99
UBXN2A-203ENST00000446425 TNPO1Q92973 898 aaKnown RBP21.26■□□□□ 0.99
UBXN2A-203ENST00000446425 TNNQ9UQP3 1299 aa21.26■□□□□ 0.99
UBXN2A-203ENST00000446425 CDC42BPBQ9Y5S2 1711 aa21.26■□□□□ 0.99
UBXN2A-203ENST00000446425 PPP1R9BQ96SB3 815 aa21.26■□□□□ 0.99
UBXN2A-203ENST00000446425 TERF1P54274 439 aa21.25■□□□□ 0.99
UBXN2A-203ENST00000446425 MVPQ14764 893 aaKnown RBP21.25■□□□□ 0.99
UBXN2A-203ENST00000446425 KIAA1211Q6ZU35 1233 aa21.25■□□□□ 0.99
UBXN2A-203ENST00000446425 STAC3Q96MF2 364 aa21.25■□□□□ 0.99
UBXN2A-203ENST00000446425 PREX2Q70Z35 1606 aa21.24■□□□□ 0.99
UBXN2A-203ENST00000446425 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
UBXN2A-203ENST00000446425 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
UBXN2A-203ENST00000446425 RBM25P49756 843 aaKnown RBP21.23■□□□□ 0.99
UBXN2A-203ENST00000446425 CALD1Q05682 793 aaKnown RBP21.23■□□□□ 0.99
UBXN2A-203ENST00000446425 SLC24A1O60721 1099 aa21.23■□□□□ 0.99
UBXN2A-203ENST00000446425 OFD1O75665 1012 aa21.23■□□□□ 0.99
UBXN2A-203ENST00000446425 CEP152O94986 1710 aa21.23■□□□□ 0.99
UBXN2A-203ENST00000446425 RAB3GAP1Q15042 981 aa21.23■□□□□ 0.99
UBXN2A-203ENST00000446425 RUNDC1Q96C34 613 aa21.23■□□□□ 0.99
UBXN2A-203ENST00000446425 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
UBXN2A-203ENST00000446425 DUOX2Q9NRD8 1548 aa21.22■□□□□ 0.99
UBXN2A-203ENST00000446425 KANK1Q14678 1352 aa21.22■□□□□ 0.99
UBXN2A-203ENST00000446425 ZSCAN30Q86W11 494 aa21.22■□□□□ 0.99
UBXN2A-203ENST00000446425 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
UBXN2A-203ENST00000446425 HDAC1Q13547 482 aaPredicted RBP21.21■□□□□ 0.99
UBXN2A-203ENST00000446425 TTC37Q6PGP7 1564 aa21.21■□□□□ 0.99
UBXN2A-203ENST00000446425 IQSEC2Q5JU85 1478 aa21.2■□□□□ 0.98
UBXN2A-203ENST00000446425 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.19■□□□□ 0.98
UBXN2A-203ENST00000446425 SHPRHQ149N8 1683 aa21.19■□□□□ 0.98
UBXN2A-203ENST00000446425 CCDC27Q2M243 656 aa21.19■□□□□ 0.98
UBXN2A-203ENST00000446425 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
UBXN2A-203ENST00000446425 BCL2L13Q9BXK5 485 aa21.18■□□□□ 0.98
UBXN2A-203ENST00000446425 CARD14Q9BXL6 1004 aa21.18■□□□□ 0.98
UBXN2A-203ENST00000446425 TCP11L2Q8N4U5 519 aa21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 ANP32BQ92688 251 aaKnown RBP21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 MAP7D2Q96T17 732 aa21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 HSP90AB1P08238 724 aaKnown RBP21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 DZIP1LQ8IYY4 767 aaKnown RBP21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 IBTKQ9P2D0 1353 aaPredicted RBP21.17■□□□□ 0.98
UBXN2A-203ENST00000446425 SYCP2Q9BX26 1530 aa21.16■□□□□ 0.98
UBXN2A-203ENST00000446425 NASPP49321 788 aaPredicted RBP21.16■□□□□ 0.98
UBXN2A-203ENST00000446425 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
UBXN2A-203ENST00000446425 KIAA1210Q9ULL0 1709 aa21.15■□□□□ 0.98
UBXN2A-203ENST00000446425 RRP7AQ9Y3A4 280 aaKnown RBP21.15■□□□□ 0.98
UBXN2A-203ENST00000446425 MSNP26038 577 aaKnown RBP21.14■□□□□ 0.98
UBXN2A-203ENST00000446425 FTSJ3Q8IY81 847 aaKnown RBP21.14■□□□□ 0.98
UBXN2A-203ENST00000446425 HS1BP3Q53T59 392 aa21.13■□□□□ 0.97
UBXN2A-203ENST00000446425 CT47B1P0C2W7 299 aaPredicted RBP21.13■□□□□ 0.97
UBXN2A-203ENST00000446425 RIPK4P57078 832 aa21.13■□□□□ 0.97
UBXN2A-203ENST00000446425 CLEC17AQ6ZS10 378 aa21.13■□□□□ 0.97
UBXN2A-203ENST00000446425 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
UBXN2A-203ENST00000446425 GOLGA6L22H0YM25 854 aa21.11■□□□□ 0.97
UBXN2A-203ENST00000446425 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
UBXN2A-203ENST00000446425 DDX19BQ9UMR2 479 aa21.1■□□□□ 0.97
UBXN2A-203ENST00000446425 KLHL40Q2TBA0 621 aa21.1■□□□□ 0.97
UBXN2A-203ENST00000446425 PRDM4Q9UKN5 801 aa21.1■□□□□ 0.97
UBXN2A-203ENST00000446425 TRPM2O94759 1503 aa21.08■□□□□ 0.97
UBXN2A-203ENST00000446425 ARHGAP31Q2M1Z3 1444 aa21.07■□□□□ 0.96
UBXN2A-203ENST00000446425 KIF2CQ99661 725 aa21.07■□□□□ 0.96
UBXN2A-203ENST00000446425 MORC1Q86VD1 984 aa21.06■□□□□ 0.96
UBXN2A-203ENST00000446425 ARHGAP5Q13017 1502 aa21.06■□□□□ 0.96
UBXN2A-203ENST00000446425 K7ELQ4 463 aaPredicted RBP21.06■□□□□ 0.96
UBXN2A-203ENST00000446425 ZNF500O60304 480 aaPredicted RBP21.06■□□□□ 0.96
UBXN2A-203ENST00000446425 ZNF445P59923 1031 aa21.06■□□□□ 0.96
UBXN2A-203ENST00000446425 RBM10P98175 930 aaKnown RBP21.06■□□□□ 0.96
UBXN2A-203ENST00000446425 NUCB1Q02818 461 aa21.06■□□□□ 0.96
UBXN2A-203ENST00000446425 DDX49Q9Y6V7 483 aaKnown RBP21.05■□□□□ 0.96
UBXN2A-203ENST00000446425 NOL7Q9UMY1 257 aaKnown RBP21.04■□□□□ 0.96
UBXN2A-203ENST00000446425 MTERF4Q7Z6M4 381 aaKnown RBP21.04■□□□□ 0.96
UBXN2A-203ENST00000446425 TRIM27P14373 513 aa21.03■□□□□ 0.96
UBXN2A-203ENST00000446425 R3HCC1Q9Y3T6 440 aaKnown RBP21.03■□□□□ 0.96
UBXN2A-203ENST00000446425 PTPRTO14522 1441 aa21.03■□□□□ 0.96
UBXN2A-203ENST00000446425 BAG4O95429 457 aaKnown RBP21.03■□□□□ 0.96
UBXN2A-203ENST00000446425 SSFA2P28290 1259 aa21.03■□□□□ 0.96
UBXN2A-203ENST00000446425 ITPRIPQ8IWB1 547 aa21.03■□□□□ 0.96
UBXN2A-203ENST00000446425 BMP2KLQ5H9B9 411 aa21.02■□□□□ 0.96
UBXN2A-203ENST00000446425 SMC4Q9NTJ3 1288 aa21.02■□□□□ 0.96
UBXN2A-203ENST00000446425 ATF7IPQ6VMQ6 1270 aa21.02■□□□□ 0.95
UBXN2A-203ENST00000446425 ZBTB40Q9NUA8 1239 aa21.02■□□□□ 0.95
UBXN2A-203ENST00000446425 FAM13BQ9NYF5 915 aa21.02■□□□□ 0.95
UBXN2A-203ENST00000446425 CLTCL1P53675 1640 aa21.02■□□□□ 0.95
UBXN2A-203ENST00000446425 ZNF518AQ6AHZ1 1483 aa21.01■□□□□ 0.95
UBXN2A-203ENST00000446425 CFAP53Q96M91 514 aa21■□□□□ 0.95
UBXN2A-203ENST00000446425 ADGRL1O94910 1474 aa21■□□□□ 0.95
UBXN2A-203ENST00000446425 KIF16BQ96L93 1317 aa21■□□□□ 0.95
UBXN2A-203ENST00000446425 CD2BP2O95400 341 aaKnown RBP21■□□□□ 0.95
UBXN2A-203ENST00000446425 PDLIM2Q96JY6 352 aa21■□□□□ 0.95
UBXN2A-203ENST00000446425 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
UBXN2A-203ENST00000446425 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
UBXN2A-203ENST00000446425 CHD1LQ86WJ1 897 aa20.99■□□□□ 0.95
UBXN2A-203ENST00000446425 FOXD4L1Q9NU39 408 aa20.99■□□□□ 0.95
UBXN2A-203ENST00000446425 NSD3Q9BZ95 1437 aa20.99■□□□□ 0.95
UBXN2A-203ENST00000446425 SBNO2Q9Y2G9 1366 aa20.99■□□□□ 0.95
UBXN2A-203ENST00000446425 CSPP1Q1MSJ5 1256 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms