RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 LRPPRCP42704 1394 aaKnown RBP10.42□□□□□ -0.74
PTPN3-204ENST00000446349 SAFBQ15424 915 aaKnown RBP eCLIP10.42□□□□□ -0.74
PTPN3-204ENST00000446349 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
PTPN3-204ENST00000446349 ABCA10Q8WWZ4 1543 aa10.42□□□□□ -0.74
PTPN3-204ENST00000446349 FKBP5Q13451 457 aaPredicted RBP10.41□□□□□ -0.74
PTPN3-204ENST00000446349 CPLX1O14810 134 aa10.41□□□□□ -0.74
PTPN3-204ENST00000446349 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
PTPN3-204ENST00000446349 GOLGA6L1Q8N7Z2 621 aa10.41□□□□□ -0.74
PTPN3-204ENST00000446349 TBC1D2BQ9UPU7 963 aa10.41□□□□□ -0.74
PTPN3-204ENST00000446349 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
PTPN3-204ENST00000446349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTPN3-204ENST00000446349 GNAI3P08754 354 aa10.41□□□□□ -0.74
PTPN3-204ENST00000446349 CCDC70Q6NSX1 233 aa10.41□□□□□ -0.74
PTPN3-204ENST00000446349 RILPL2Q969X0 211 aa10.41□□□□□ -0.74
PTPN3-204ENST00000446349 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
PTPN3-204ENST00000446349 SART3Q15020 963 aaKnown RBP10.4□□□□□ -0.74
PTPN3-204ENST00000446349 KCNH5Q8NCM2 988 aa10.4□□□□□ -0.74
PTPN3-204ENST00000446349 APPP05067 770 aa10.4□□□□□ -0.74
PTPN3-204ENST00000446349 ANKRD45Q5TZF3 282 aa10.4□□□□□ -0.74
PTPN3-204ENST00000446349 TEX14Q8IWB6 1497 aa10.4□□□□□ -0.74
PTPN3-204ENST00000446349 KIAA1107Q9UPP5 1409 aa10.4□□□□□ -0.74
PTPN3-204ENST00000446349 RUSC2Q8N2Y8 1516 aa10.4□□□□□ -0.75
PTPN3-204ENST00000446349 KRI1Q8N9T8 703 aaKnown RBP10.39□□□□□ -0.75
PTPN3-204ENST00000446349 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
PTPN3-204ENST00000446349 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
PTPN3-204ENST00000446349 WWC2Q6AWC2 1192 aa10.39□□□□□ -0.75
PTPN3-204ENST00000446349 RALYLQ86SE5 291 aaKnown RBP10.39□□□□□ -0.75
PTPN3-204ENST00000446349 GOLGA6L19H0YKK7 550 aa10.39□□□□□ -0.75
PTPN3-204ENST00000446349 IPO7O95373 1038 aaKnown RBP10.38□□□□□ -0.75
PTPN3-204ENST00000446349 PRM3Q9NNZ6 103 aa10.38□□□□□ -0.75
PTPN3-204ENST00000446349 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
PTPN3-204ENST00000446349 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
PTPN3-204ENST00000446349 INTS3Q68E01 1043 aaKnown RBP10.38□□□□□ -0.75
PTPN3-204ENST00000446349 CD109Q6YHK3 1445 aa10.38□□□□□ -0.75
PTPN3-204ENST00000446349 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
PTPN3-204ENST00000446349 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
PTPN3-204ENST00000446349 PSMA5P28066 241 aa10.37□□□□□ -0.75
PTPN3-204ENST00000446349 NAP1L5Q96NT1 182 aaPredicted RBP10.37□□□□□ -0.75
PTPN3-204ENST00000446349 NESP48681 1621 aa10.37□□□□□ -0.75
PTPN3-204ENST00000446349 RTEL1-TNFRSF6BF6WH68 1400 aa10.37□□□□□ -0.75
PTPN3-204ENST00000446349 TIAM1Q13009 1591 aa10.37□□□□□ -0.75
PTPN3-204ENST00000446349 CLUAP1Q96AJ1 413 aa10.37□□□□□ -0.75
PTPN3-204ENST00000446349 UBTFL1P0CB47 393 aaPredicted RBP10.37□□□□□ -0.75
PTPN3-204ENST00000446349 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
PTPN3-204ENST00000446349 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
PTPN3-204ENST00000446349 DHX16O60231 1041 aaKnown RBP10.36□□□□□ -0.75
PTPN3-204ENST00000446349 A0A0U1RQG5 324 aaPredicted RBP10.36□□□□□ -0.75
PTPN3-204ENST00000446349 AFAP1Q8N556 730 aa10.36□□□□□ -0.75
PTPN3-204ENST00000446349 ITSN2Q9NZM3 1697 aa10.36□□□□□ -0.75
PTPN3-204ENST00000446349 WDHD1O75717 1129 aaPredicted RBP10.36□□□□□ -0.75
PTPN3-204ENST00000446349 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
PTPN3-204ENST00000446349 PLB1Q6P1J6 1458 aa10.36□□□□□ -0.75
PTPN3-204ENST00000446349 CCAR1Q8IX12 1150 aaKnown RBP10.36□□□□□ -0.75
PTPN3-204ENST00000446349 NFXL1Q6ZNB6 911 aa10.36□□□□□ -0.75
PTPN3-204ENST00000446349 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.35□□□□□ -0.75
PTPN3-204ENST00000446349 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
PTPN3-204ENST00000446349 ZSCAN25Q6NSZ9 544 aa10.35□□□□□ -0.75
PTPN3-204ENST00000446349 ZNF652Q9Y2D9 606 aa10.35□□□□□ -0.75
PTPN3-204ENST00000446349 PRXQ9BXM0 1461 aa10.35□□□□□ -0.75
PTPN3-204ENST00000446349 CNTROBQ8N137 903 aa10.35□□□□□ -0.75
PTPN3-204ENST00000446349 CLASRPQ8N2M8 674 aaKnown RBP10.35□□□□□ -0.75
PTPN3-204ENST00000446349 RDXP35241 583 aaKnown RBP10.34□□□□□ -0.75
PTPN3-204ENST00000446349 CABP4P57796 275 aa10.34□□□□□ -0.75
PTPN3-204ENST00000446349 TOM1L2Q6ZVM7 507 aa10.34□□□□□ -0.75
PTPN3-204ENST00000446349 CNKSR2Q8WXI2 1034 aa10.34□□□□□ -0.75
PTPN3-204ENST00000446349 BECN2A8MW95 431 aa10.34□□□□□ -0.75
PTPN3-204ENST00000446349 RRP7AQ9Y3A4 280 aaKnown RBP10.34□□□□□ -0.75
PTPN3-204ENST00000446349 ERBINQ96RT1 1412 aa10.33□□□□□ -0.76
PTPN3-204ENST00000446349 GRIN2AQ12879 1464 aa10.33□□□□□ -0.76
PTPN3-204ENST00000446349 APAF1O14727 1248 aa10.33□□□□□ -0.76
PTPN3-204ENST00000446349 PDIA4P13667 645 aaKnown RBP10.33□□□□□ -0.76
PTPN3-204ENST00000446349 RRP1P56182 461 aaKnown RBP10.33□□□□□ -0.76
PTPN3-204ENST00000446349 PEG3Q9GZU2 1588 aa10.33□□□□□ -0.76
PTPN3-204ENST00000446349 MCM2P49736 904 aa10.33□□□□□ -0.76
PTPN3-204ENST00000446349 FAM135AQ9P2D6 1515 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 UNC13AQ9UPW8 1703 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 ANO2Q9NQ90 1003 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 MAP3K1Q13233 1512 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 CCT4P50991 539 aaKnown RBP10.32□□□□□ -0.76
PTPN3-204ENST00000446349 PRAM1Q96QH2 718 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 PRDM11Q9NQV5 511 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 CCDC158Q5M9N0 1113 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 GOLGA6L3A6NEY3 463 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 RAD21O60216 631 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
PTPN3-204ENST00000446349 PES1O00541 588 aaKnown RBP10.31□□□□□ -0.76
PTPN3-204ENST00000446349 STARD3NLO95772 234 aa10.31□□□□□ -0.76
PTPN3-204ENST00000446349 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
PTPN3-204ENST00000446349 ELL2O00472 640 aaPredicted RBP10.31□□□□□ -0.76
PTPN3-204ENST00000446349 NUCB2P80303 420 aa10.31□□□□□ -0.76
PTPN3-204ENST00000446349 CDK19Q9BWU1 502 aa10.31□□□□□ -0.76
PTPN3-204ENST00000446349 NACAP1Q9BZK3 213 aa10.31□□□□□ -0.76
PTPN3-204ENST00000446349 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
PTPN3-204ENST00000446349 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.31□□□□□ -0.76
PTPN3-204ENST00000446349 DHX8Q14562 1220 aaKnown RBP10.31□□□□□ -0.76
PTPN3-204ENST00000446349 KIF7Q2M1P5 1343 aa10.3□□□□□ -0.76
PTPN3-204ENST00000446349 PDCP20941 246 aa10.3□□□□□ -0.76
PTPN3-204ENST00000446349 CCDC27Q2M243 656 aa10.3□□□□□ -0.76
PTPN3-204ENST00000446349 MCTP1Q6DN14 999 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms