RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 COG6Q9Y2V7 657 aa7.78□□□□□ -1.16
R3HDM1-211ENST00000445855 USP17L8P0C7I0 530 aa7.77□□□□□ -1.17
R3HDM1-211ENST00000445855 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
R3HDM1-211ENST00000445855 PRM3Q9NNZ6 103 aa7.77□□□□□ -1.17
R3HDM1-211ENST00000445855 ANKK1Q8NFD2 765 aa7.76□□□□□ -1.17
R3HDM1-211ENST00000445855 STAC3Q96MF2 364 aa7.76□□□□□ -1.17
R3HDM1-211ENST00000445855 ARID3CA6NKF2 412 aa7.75□□□□□ -1.17
R3HDM1-211ENST00000445855 ACTN4O43707 911 aaKnown RBP7.75□□□□□ -1.17
R3HDM1-211ENST00000445855 HELBQ8NG08 1087 aaPredicted RBP7.75□□□□□ -1.17
R3HDM1-211ENST00000445855 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
R3HDM1-211ENST00000445855 C6orf229H3BNL8 230 aa7.74□□□□□ -1.17
R3HDM1-211ENST00000445855 WWC1Q8IX03 1113 aa7.74□□□□□ -1.17
R3HDM1-211ENST00000445855 SOWAHBA6NEL2 793 aa7.73□□□□□ -1.17
R3HDM1-211ENST00000445855 MORN1Q5T089 497 aa7.73□□□□□ -1.17
R3HDM1-211ENST00000445855 ANKRD13DQ6ZTN6 518 aa7.73□□□□□ -1.17
R3HDM1-211ENST00000445855 Q3C1V9 767 aa7.72□□□□□ -1.17
R3HDM1-211ENST00000445855 GDPD2Q9HCC8 539 aa7.72□□□□□ -1.17
R3HDM1-211ENST00000445855 CFAP99D6REC4 459 aa7.71□□□□□ -1.18
R3HDM1-211ENST00000445855 PPP4CP60510 307 aa7.71□□□□□ -1.18
R3HDM1-211ENST00000445855 CTDSPL2Q05D32 466 aa7.71□□□□□ -1.18
R3HDM1-211ENST00000445855 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
R3HDM1-211ENST00000445855 TSR3Q9UJK0 312 aaKnown RBP7.71□□□□□ -1.18
R3HDM1-211ENST00000445855 TSC1Q92574 1164 aa7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 GJD4Q96KN9 370 aaPredicted RBP7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 ARID3AQ99856 593 aa7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 ZNF777Q9ULD5 760 aaPredicted RBP7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 TBC1D2BQ9UPU7 963 aa7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 HPS5Q9UPZ3 1129 aa7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 SLC27A5Q9Y2P5 690 aa7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 ZNF330Q9Y3S2 320 aaPredicted RBP7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 NDUFB9Q9Y6M9 179 aa7.7□□□□□ -1.18
R3HDM1-211ENST00000445855 BCAMP50895 628 aa7.69□□□□□ -1.18
R3HDM1-211ENST00000445855 PUS10Q3MIT2 529 aaKnown RBP7.69□□□□□ -1.18
R3HDM1-211ENST00000445855 PRR7Q8TB68 274 aa7.69□□□□□ -1.18
R3HDM1-211ENST00000445855 WNT2BQ93097 391 aa7.69□□□□□ -1.18
R3HDM1-211ENST00000445855 ABL2P42684 1182 aa7.68□□□□□ -1.18
R3HDM1-211ENST00000445855 DESI1Q6ICB0 168 aa7.68□□□□□ -1.18
R3HDM1-211ENST00000445855 CCDC82Q8N4S0 544 aa7.68□□□□□ -1.18
R3HDM1-211ENST00000445855 SYMPKQ92797 1274 aaKnown RBP7.68□□□□□ -1.18
R3HDM1-211ENST00000445855 HMX1Q9NP08 348 aaPredicted RBP7.68□□□□□ -1.18
R3HDM1-211ENST00000445855 SALL2Q9Y467 1007 aaPredicted RBP7.68□□□□□ -1.18
R3HDM1-211ENST00000445855 APLP1P51693 650 aa7.67□□□□□ -1.18
R3HDM1-211ENST00000445855 TRIM34Q9BYJ4 488 aa7.67□□□□□ -1.18
R3HDM1-211ENST00000445855 NR1I2O75469 434 aa7.66□□□□□ -1.18
R3HDM1-211ENST00000445855 LRRN4Q8WUT4 740 aa7.66□□□□□ -1.18
R3HDM1-211ENST00000445855 CCDC97Q96F63 343 aaPredicted RBP7.66□□□□□ -1.18
R3HDM1-211ENST00000445855 SERPINA10Q9UK55 444 aa7.66□□□□□ -1.18
R3HDM1-211ENST00000445855 PCDHB3Q9Y5E6 796 aa7.66□□□□□ -1.18
R3HDM1-211ENST00000445855 BLOC1S3Q6QNY0 202 aa7.65□□□□□ -1.18
R3HDM1-211ENST00000445855 FMNL1O95466 1100 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-211ENST00000445855 WASHC4Q2M389 1173 aa7.64□□□□□ -1.19
R3HDM1-211ENST00000445855 BRICD5Q6PL45 260 aa7.64□□□□□ -1.19
R3HDM1-211ENST00000445855 RNF19BQ6ZMZ0 732 aa7.64□□□□□ -1.19
R3HDM1-211ENST00000445855 USB1Q9BQ65 265 aaKnown RBP7.64□□□□□ -1.19
R3HDM1-211ENST00000445855 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
R3HDM1-211ENST00000445855 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
R3HDM1-211ENST00000445855 GPR37L1O60883 481 aa7.63□□□□□ -1.19
R3HDM1-211ENST00000445855 IRF5Q13568 498 aa7.63□□□□□ -1.19
R3HDM1-211ENST00000445855 LYPD8Q6UX82 237 aa7.63□□□□□ -1.19
R3HDM1-211ENST00000445855 THSD4Q6ZMP0 1018 aa7.63□□□□□ -1.19
R3HDM1-211ENST00000445855 SCUBE3Q8IX30 993 aa7.63□□□□□ -1.19
R3HDM1-211ENST00000445855 PER1O15534 1290 aaPredicted RBP7.62□□□□□ -1.19
R3HDM1-211ENST00000445855 NYAP1Q6ZVC0 841 aa7.62□□□□□ -1.19
R3HDM1-211ENST00000445855 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
R3HDM1-211ENST00000445855 THAP11Q96EK4 314 aa7.62□□□□□ -1.19
R3HDM1-211ENST00000445855 WBP1LQ9NX94 342 aa7.62□□□□□ -1.19
R3HDM1-211ENST00000445855 POM121CA8CG34 1229 aa7.6□□□□□ -1.19
R3HDM1-211ENST00000445855 JUNDP17535 347 aa7.6□□□□□ -1.19
R3HDM1-211ENST00000445855 NR6A1Q15406 480 aa7.6□□□□□ -1.19
R3HDM1-211ENST00000445855 EPS8L1Q8TE68 723 aa7.6□□□□□ -1.19
R3HDM1-211ENST00000445855 GLMNQ92990 594 aa7.6□□□□□ -1.19
R3HDM1-211ENST00000445855 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
R3HDM1-211ENST00000445855 MSS51Q4VC12 460 aa7.59□□□□□ -1.19
R3HDM1-211ENST00000445855 PTPRNQ16849 979 aa7.58□□□□□ -1.2
R3HDM1-211ENST00000445855 KCTD12Q96CX2 325 aaKnown RBP7.58□□□□□ -1.2
R3HDM1-211ENST00000445855 SOX11P35716 441 aa7.57□□□□□ -1.2
R3HDM1-211ENST00000445855 SPSB2Q99619 263 aa7.57□□□□□ -1.2
R3HDM1-211ENST00000445855 F12P00748 615 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-211ENST00000445855 COPS2P61201 443 aa7.56□□□□□ -1.2
R3HDM1-211ENST00000445855 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
R3HDM1-211ENST00000445855 ZC3H4Q9UPT8 1303 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-211ENST00000445855 DXOO77932 396 aaKnown RBP7.55□□□□□ -1.2
R3HDM1-211ENST00000445855 HDGFL1Q5TGJ6 251 aa7.55□□□□□ -1.2
R3HDM1-211ENST00000445855 ADH1BP00325 375 aa7.54□□□□□ -1.2
R3HDM1-211ENST00000445855 CCNYL3P0C7X3 344 aa7.54□□□□□ -1.2
R3HDM1-211ENST00000445855 MMP16P51512 607 aa7.54□□□□□ -1.2
R3HDM1-211ENST00000445855 FAM160A2Q8N612 972 aaPredicted RBP7.54□□□□□ -1.2
R3HDM1-211ENST00000445855 ADAMTS19Q8TE59 1207 aa7.54□□□□□ -1.2
R3HDM1-211ENST00000445855 FKBPLQ9UIM3 349 aa7.54□□□□□ -1.2
R3HDM1-211ENST00000445855 ZPR1O75312 459 aa7.53□□□□□ -1.2
R3HDM1-211ENST00000445855 CDAN1Q8IWY9 1227 aa7.53□□□□□ -1.2
R3HDM1-211ENST00000445855 ALG2Q9H553 416 aa7.53□□□□□ -1.2
R3HDM1-211ENST00000445855 MAP10Q9P2G4 905 aa7.53□□□□□ -1.2
R3HDM1-211ENST00000445855 POTEMA6NI47 508 aa7.52□□□□□ -1.21
R3HDM1-211ENST00000445855 PPP1R15AO75807 674 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-211ENST00000445855 EIF4G2P78344 907 aaKnown RBP eCLIP7.52□□□□□ -1.21
R3HDM1-211ENST00000445855 NR1H3Q13133 447 aa7.52□□□□□ -1.21
R3HDM1-211ENST00000445855 MTRQ99707 1265 aa7.52□□□□□ -1.21
R3HDM1-211ENST00000445855 NUDT12Q9BQG2 462 aa7.52□□□□□ -1.21
R3HDM1-211ENST00000445855 EVA1BQ9NVM1 165 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms