RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 CRBNQ96SW2 442 aa23.46■■□□□ 1.35
CLDN9-201ENST00000445369 APAF1O14727 1248 aa23.44■■□□□ 1.34
CLDN9-201ENST00000445369 TSPOAP1O95153 1857 aa23.44■■□□□ 1.34
CLDN9-201ENST00000445369 EVC2Q86UK5 1308 aa23.44■■□□□ 1.34
CLDN9-201ENST00000445369 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
CLDN9-201ENST00000445369 REREQ9P2R6 1566 aa23.43■■□□□ 1.34
CLDN9-201ENST00000445369 MORC1Q86VD1 984 aa23.42■■□□□ 1.34
CLDN9-201ENST00000445369 ANKRD36BQ8N2N9 1353 aa23.42■■□□□ 1.34
CLDN9-201ENST00000445369 NKTRP30414 1462 aaKnown RBP23.41■■□□□ 1.34
CLDN9-201ENST00000445369 C20orf194Q5TEA3 1177 aa23.4■■□□□ 1.34
CLDN9-201ENST00000445369 TCERG1O14776 1098 aaKnown RBP23.39■■□□□ 1.34
CLDN9-201ENST00000445369 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.34
CLDN9-201ENST00000445369 SPINK5Q9NQ38 1064 aaPredicted RBP23.39■■□□□ 1.33
CLDN9-201ENST00000445369 NSD2O96028 1365 aa23.38■■□□□ 1.33
CLDN9-201ENST00000445369 PTPRMP28827 1452 aa23.38■■□□□ 1.33
CLDN9-201ENST00000445369 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
CLDN9-201ENST00000445369 AGLP35573 1532 aa23.37■■□□□ 1.33
CLDN9-201ENST00000445369 E9PSI1 815 aa23.37■■□□□ 1.33
CLDN9-201ENST00000445369 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
CLDN9-201ENST00000445369 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
CLDN9-201ENST00000445369 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
CLDN9-201ENST00000445369 NINLQ9Y2I6 1382 aa23.35■■□□□ 1.33
CLDN9-201ENST00000445369 MS4A1P11836 297 aa23.32■■□□□ 1.32
CLDN9-201ENST00000445369 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
CLDN9-201ENST00000445369 CABP2Q9NPB3 220 aa23.32■■□□□ 1.32
CLDN9-201ENST00000445369 ALKQ9UM73 1620 aa23.32■■□□□ 1.32
CLDN9-201ENST00000445369 DMRT2Q9Y5R5 561 aa23.32■■□□□ 1.32
CLDN9-201ENST00000445369 YTHDC2Q9H6S0 1430 aaKnown RBP23.32■■□□□ 1.32
CLDN9-201ENST00000445369 ANKRD26Q9UPS8 1709 aa23.31■■□□□ 1.32
CLDN9-201ENST00000445369 FBXO31Q5XUX0 539 aaPredicted RBP23.31■■□□□ 1.32
CLDN9-201ENST00000445369 KDM2BQ8NHM5 1336 aa23.3■■□□□ 1.32
CLDN9-201ENST00000445369 WWC1Q8IX03 1113 aa23.3■■□□□ 1.32
CLDN9-201ENST00000445369 ABCC11Q96J66 1382 aa23.3■■□□□ 1.32
CLDN9-201ENST00000445369 MTHFSP49914 203 aa23.29■■□□□ 1.32
CLDN9-201ENST00000445369 A0A1W2PP64 1363 aa23.29■■□□□ 1.32
CLDN9-201ENST00000445369 SAFB2Q14151 953 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLDN9-201ENST00000445369 RUNDC1Q96C34 613 aa23.29■■□□□ 1.32
CLDN9-201ENST00000445369 SPATA31D1Q6ZQQ2 1576 aa23.28■■□□□ 1.32
CLDN9-201ENST00000445369 ANP32AP39687 249 aaKnown RBP23.28■■□□□ 1.32
CLDN9-201ENST00000445369 STK26Q9P289 416 aa23.28■■□□□ 1.32
CLDN9-201ENST00000445369 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
CLDN9-201ENST00000445369 CFAP53Q96M91 514 aa23.27■■□□□ 1.32
CLDN9-201ENST00000445369 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.32
CLDN9-201ENST00000445369 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
CLDN9-201ENST00000445369 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
CLDN9-201ENST00000445369 NOP58Q9Y2X3 529 aaKnown RBP23.26■■□□□ 1.31
CLDN9-201ENST00000445369 SETD1AO15047 1707 aaKnown RBP23.25■■□□□ 1.31
CLDN9-201ENST00000445369 PDE4AP27815 886 aa23.25■■□□□ 1.31
CLDN9-201ENST00000445369 ADGRB2O60241 1585 aa23.25■■□□□ 1.31
CLDN9-201ENST00000445369 CD163L1Q9NR16 1453 aa23.25■■□□□ 1.31
CLDN9-201ENST00000445369 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
CLDN9-201ENST00000445369 IPO9Q96P70 1041 aaKnown RBP23.24■■□□□ 1.31
CLDN9-201ENST00000445369 BACH2Q9BYV9 841 aa23.24■■□□□ 1.31
CLDN9-201ENST00000445369 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
CLDN9-201ENST00000445369 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
CLDN9-201ENST00000445369 MED14O60244 1454 aa23.23■■□□□ 1.31
CLDN9-201ENST00000445369 A2ML1A8K2U0 1454 aa23.23■■□□□ 1.31
CLDN9-201ENST00000445369 BCAR3O75815 825 aa23.23■■□□□ 1.31
CLDN9-201ENST00000445369 TCP11L2Q8N4U5 519 aa23.23■■□□□ 1.31
CLDN9-201ENST00000445369 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
CLDN9-201ENST00000445369 ARHGEF40Q8TER5 1519 aa23.22■■□□□ 1.31
CLDN9-201ENST00000445369 DLC1Q96QB1 1528 aa23.22■■□□□ 1.31
CLDN9-201ENST00000445369 MINK1Q8N4C8 1332 aaPredicted RBP23.21■■□□□ 1.31
CLDN9-201ENST00000445369 NLRP1Q9C000 1473 aa23.21■■□□□ 1.31
CLDN9-201ENST00000445369 CCDC27Q2M243 656 aa23.2■■□□□ 1.3
CLDN9-201ENST00000445369 KIF20BQ96Q89 1820 aa23.2■■□□□ 1.3
CLDN9-201ENST00000445369 NCBP3Q53F19 620 aaKnown RBP23.2■■□□□ 1.3
CLDN9-201ENST00000445369 COL3A1P02461 1466 aaPredicted RBP23.2■■□□□ 1.3
CLDN9-201ENST00000445369 POGKQ9P215 609 aa23.19■■□□□ 1.3
CLDN9-201ENST00000445369 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
CLDN9-201ENST00000445369 WDR63Q8IWG1 891 aa23.18■■□□□ 1.3
CLDN9-201ENST00000445369 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
CLDN9-201ENST00000445369 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
CLDN9-201ENST00000445369 STAG3Q9UJ98 1225 aa23.18■■□□□ 1.3
CLDN9-201ENST00000445369 TERF2IPQ9NYB0 399 aa23.17■■□□□ 1.3
CLDN9-201ENST00000445369 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
CLDN9-201ENST00000445369 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
CLDN9-201ENST00000445369 PDE3AQ14432 1141 aa23.15■■□□□ 1.3
CLDN9-201ENST00000445369 NRXN3Q9Y4C0 1643 aa23.15■■□□□ 1.3
CLDN9-201ENST00000445369 GGNBP2Q9H3C7 697 aa23.14■■□□□ 1.29
CLDN9-201ENST00000445369 FYB1O15117 783 aa23.13■■□□□ 1.29
CLDN9-201ENST00000445369 U2AF1L5P0DN76 240 aaPredicted RBP23.13■■□□□ 1.29
CLDN9-201ENST00000445369 U2AF1Q01081 240 aaKnown RBP eCLIP23.13■■□□□ 1.29
CLDN9-201ENST00000445369 CDK19Q9BWU1 502 aa23.12■■□□□ 1.29
CLDN9-201ENST00000445369 HDGFL2Q7Z4V5 671 aaPredicted RBP23.1■■□□□ 1.29
CLDN9-201ENST00000445369 ZBTB47Q9UFB7 747 aaPredicted RBP23.1■■□□□ 1.29
CLDN9-201ENST00000445369 ATP7BP35670 1465 aa23.09■■□□□ 1.29
CLDN9-201ENST00000445369 RARSP54136 660 aaKnown RBP23.09■■□□□ 1.29
CLDN9-201ENST00000445369 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
CLDN9-201ENST00000445369 PLEKHF1Q96S99 279 aa23.07■■□□□ 1.28
CLDN9-201ENST00000445369 KNDC1Q76NI1 1749 aa23.07■■□□□ 1.28
CLDN9-201ENST00000445369 MLECQ14165 292 aa23.06■■□□□ 1.28
CLDN9-201ENST00000445369 CABP1Q9NZU7 370 aa23.06■■□□□ 1.28
CLDN9-201ENST00000445369 PNPLA6Q8IY17 1366 aa23.06■■□□□ 1.28
CLDN9-201ENST00000445369 CDC42BPGQ6DT37 1551 aa23.06■■□□□ 1.28
CLDN9-201ENST00000445369 CANXP27824 592 aaKnown RBP23.05■■□□□ 1.28
CLDN9-201ENST00000445369 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
CLDN9-201ENST00000445369 PANK1Q8TE04 598 aa23.04■■□□□ 1.28
CLDN9-201ENST00000445369 WAPLQ7Z5K2 1190 aa23.04■■□□□ 1.28
CLDN9-201ENST00000445369 CLUAP1Q96AJ1 413 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms