RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 RASSF4Q9H2L5 321 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 BCCIPQ9P287 314 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 MAGI1Q96QZ7 1491 aaPredicted RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 EFCAB2Q5VUJ9 269 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 FOXD4L5Q5VV16 416 aaPredicted RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 FOXD4L4Q8WXT5 416 aaPredicted RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 TRERF1Q96PN7 1200 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 ARHGAP35Q9NRY4 1499 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 DHX37Q8IY37 1157 aaKnown RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 HDAC5Q9UQL6 1122 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 ZKSCAN5Q9Y2L8 839 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 KIF2AO00139 706 aaPredicted RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 KIAA0754O94854 1291 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 TPM1P09493 284 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 KANK4Q5T7N3 995 aaPredicted RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 CLUAP1Q96AJ1 413 aa6.22□□□□□ -1.41
SCN11A-202ENST00000444237 CWC22Q9HCG8 908 aaKnown RBP6.22□□□□□ -1.41
SCN11A-202ENST00000444237 BRD4O60885 1362 aaPredicted RBP6.21□□□□□ -1.41
SCN11A-202ENST00000444237 GTF2F1P35269 517 aaKnown RBP eCLIP6.21□□□□□ -1.41
SCN11A-202ENST00000444237 RBM25P49756 843 aaKnown RBP6.21□□□□□ -1.41
SCN11A-202ENST00000444237 WDR62O43379 1518 aa6.21□□□□□ -1.41
SCN11A-202ENST00000444237 DDX11Q96FC9 970 aa6.21□□□□□ -1.42
SCN11A-202ENST00000444237 PRPF40AO75400 957 aaKnown RBP6.21□□□□□ -1.42
SCN11A-202ENST00000444237 GGT6Q6P531 493 aa6.21□□□□□ -1.42
SCN11A-202ENST00000444237 DCAF11Q8TEB1 546 aa6.21□□□□□ -1.42
SCN11A-202ENST00000444237 PES1O00541 588 aaKnown RBP6.21□□□□□ -1.42
SCN11A-202ENST00000444237 TMCO3Q6UWJ1 677 aa6.21□□□□□ -1.42
SCN11A-202ENST00000444237 SLC26A8Q96RN1 970 aa6.21□□□□□ -1.42
SCN11A-202ENST00000444237 NINLQ9Y2I6 1382 aa6.21□□□□□ -1.42
SCN11A-202ENST00000444237 BMS1Q14692 1282 aaKnown RBP6.2□□□□□ -1.42
SCN11A-202ENST00000444237 MYCBPQ99417 103 aaPredicted RBP6.2□□□□□ -1.42
SCN11A-202ENST00000444237 CCDC9Q9Y3X0 531 aaKnown RBP6.2□□□□□ -1.42
SCN11A-202ENST00000444237 REC8O95072 547 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 CUL7Q14999 1698 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 ANKRD30AQ9BXX3 1397 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 GRIN2AQ12879 1464 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 CCDC18Q5T9S5 1454 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 COG6Q9Y2V7 657 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 KANK1Q14678 1352 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 CT47A1Q5JQC4 288 aaPredicted RBP6.2□□□□□ -1.42
SCN11A-202ENST00000444237 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
SCN11A-202ENST00000444237 K7ELQ4 463 aaPredicted RBP6.19□□□□□ -1.42
SCN11A-202ENST00000444237 ERLIN1O75477 346 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 IVLP07476 585 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 DCTN1Q14203 1278 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 TTLL5Q6EMB2 1281 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 PAIP2Q9BPZ3 127 aaKnown RBP6.19□□□□□ -1.42
SCN11A-202ENST00000444237 EIF4G3O43432 1585 aaKnown RBP6.19□□□□□ -1.42
SCN11A-202ENST00000444237 TNNT1P13805 278 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 HNRNPMP52272 730 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN11A-202ENST00000444237 RUFY1Q96T51 708 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 BIVM-ERCC5R4GMW8 1640 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 RABEP1Q15276 862 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 TRIM5Q9C035 493 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 TTC31Q49AM3 519 aaPredicted RBP6.19□□□□□ -1.42
SCN11A-202ENST00000444237 FILIP1Q7Z7B0 1213 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 DNAAF4Q8WXU2 420 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 L3MBTL2Q969R5 705 aa6.19□□□□□ -1.42
SCN11A-202ENST00000444237 SMC4Q9NTJ3 1288 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 KLHL40Q2TBA0 621 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 ERICH3Q5RHP9 1530 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 PAXBP1Q9Y5B6 917 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 A0A1B0GUL7 405 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 ZKSCAN2Q63HK3 967 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 NOL7Q9UMY1 257 aaKnown RBP6.18□□□□□ -1.42
SCN11A-202ENST00000444237 RSPH4AQ5TD94 716 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 CCDC34Q96HJ3 373 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 TBC1D2Q9BYX2 928 aa6.18□□□□□ -1.42
SCN11A-202ENST00000444237 MNAT1P51948 309 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 UBXN4Q92575 508 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 DDX19BQ9UMR2 479 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 MCM2P49736 904 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 SARNPP82979 210 aaKnown RBP6.17□□□□□ -1.42
SCN11A-202ENST00000444237 IQGAP2Q13576 1575 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 MYRIPQ8NFW9 859 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 CCDC192P0DO97 292 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 UVSSAQ2YD98 709 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 NEFHP12036 1026 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 PDE3AQ14432 1141 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 NOLC1Q14978 699 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCN11A-202ENST00000444237 SPC24Q8NBT2 197 aa6.17□□□□□ -1.42
SCN11A-202ENST00000444237 SPAG9O60271 1321 aaKnown RBP6.17□□□□□ -1.42
SCN11A-202ENST00000444237 NPHP1O15259 732 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 MEX3CQ5U5Q3 659 aaKnown RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 TNPO1Q92973 898 aaKnown RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 NOL8Q76FK4 1167 aaKnown RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 PLCD4Q9BRC7 762 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 KIF7Q2M1P5 1343 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 CDC45O75419 566 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 NF2P35240 595 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 INTS3Q68E01 1043 aaKnown RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 KIF18AQ8NI77 898 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 EFCC1Q9HA90 598 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 HMMRO75330 724 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 ANKRD20A12PQ8NF67 263 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 NAT10Q9H0A0 1025 aaKnown RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 SYCE3A1L190 88 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 LIG1P18858 919 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 FOXD4L6Q3SYB3 417 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms