RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 NRXN3Q9Y4C0 1643 aa3.83□□□□□ -1.8
LINC00393-201ENST00000443621 CEP170BQ9Y4F5 1589 aaPredicted RBP3.82□□□□□ -1.8
LINC00393-201ENST00000443621 CGNL1Q0VF96 1302 aa3.82□□□□□ -1.8
LINC00393-201ENST00000443621 FBXO31Q5XUX0 539 aaPredicted RBP3.82□□□□□ -1.8
LINC00393-201ENST00000443621 TMC1Q8TDI8 760 aa3.82□□□□□ -1.8
LINC00393-201ENST00000443621 PNISRQ8TF01 805 aaKnown RBP3.82□□□□□ -1.8
LINC00393-201ENST00000443621 ZNF692Q9BU19 519 aaPredicted RBP3.82□□□□□ -1.8
LINC00393-201ENST00000443621 HIRIP3Q9BW71 556 aaPredicted RBP3.82□□□□□ -1.8
LINC00393-201ENST00000443621 TERF2IPQ9NYB0 399 aa3.82□□□□□ -1.8
LINC00393-201ENST00000443621 ANKRD26Q9UPS8 1709 aa3.81□□□□□ -1.8
LINC00393-201ENST00000443621 RIMS1Q86UR5 1692 aaKnown RBP3.81□□□□□ -1.8
LINC00393-201ENST00000443621 CDC42BPGQ6DT37 1551 aa3.81□□□□□ -1.8
LINC00393-201ENST00000443621 TULP4Q9NRJ4 1543 aa3.81□□□□□ -1.8
LINC00393-201ENST00000443621 ADAMTS13Q76LX8 1427 aa3.81□□□□□ -1.8
LINC00393-201ENST00000443621 NCOA3Q9Y6Q9 1424 aa3.81□□□□□ -1.8
LINC00393-201ENST00000443621 POLR3AO14802 1390 aaPredicted RBP3.81□□□□□ -1.8
LINC00393-201ENST00000443621 CHGAP10645 457 aaKnown RBP3.81□□□□□ -1.8
LINC00393-201ENST00000443621 TRHP20396 242 aaPredicted RBP3.81□□□□□ -1.8
LINC00393-201ENST00000443621 PANK3Q9H999 370 aa3.81□□□□□ -1.8
LINC00393-201ENST00000443621 LRRC7Q96NW7 1537 aa3.8□□□□□ -1.8
LINC00393-201ENST00000443621 CHD2O14647 1828 aaKnown RBP3.8□□□□□ -1.8
LINC00393-201ENST00000443621 PHF23Q9BUL5 403 aaPredicted RBP3.8□□□□□ -1.8
LINC00393-201ENST00000443621 MRS2Q9HD23 443 aa3.8□□□□□ -1.8
LINC00393-201ENST00000443621 CCDC61Q9Y6R9 512 aa3.8□□□□□ -1.8
LINC00393-201ENST00000443621 ITSN1Q15811 1721 aa3.8□□□□□ -1.8
LINC00393-201ENST00000443621 XRN1Q8IZH2 1706 aaKnown RBP3.8□□□□□ -1.8
LINC00393-201ENST00000443621 BLMP54132 1417 aaPredicted RBP3.79□□□□□ -1.8
LINC00393-201ENST00000443621 CPSF1Q10570 1443 aaKnown RBP3.79□□□□□ -1.8
LINC00393-201ENST00000443621 EDC4Q6P2E9 1401 aaKnown RBP3.79□□□□□ -1.8
LINC00393-201ENST00000443621 ANKARQ7Z5J8 1434 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 KIF24Q5T7B8 1368 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 USP54Q70EL1 1684 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 PLEKHG3A1L390 1219 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 WASLO00401 505 aaPredicted RBP3.79□□□□□ -1.8
LINC00393-201ENST00000443621 HDGFL2Q7Z4V5 671 aaPredicted RBP3.79□□□□□ -1.8
LINC00393-201ENST00000443621 TXNDC2Q86VQ3 553 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 ANKLE2Q86XL3 938 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 PNNQ9H307 717 aaKnown RBP3.79□□□□□ -1.8
LINC00393-201ENST00000443621 POGKQ9P215 609 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 TRAK1Q9UPV9 953 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 AKAP12Q02952 1782 aa3.79□□□□□ -1.8
LINC00393-201ENST00000443621 MON2Q7Z3U7 1717 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 AATKQ6ZMQ8 1374 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 PNPLA6Q8IY17 1366 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 TOPAZ1Q8N9V7 1692 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 NWD1Q149M9 1564 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 PPP2R1AP30153 589 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 MLECQ14165 292 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 CCDC27Q2M243 656 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 TMEM132EQ6IEE7 984 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 PRAM1Q96QH2 718 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 NKTRP30414 1462 aaKnown RBP3.78□□□□□ -1.8
LINC00393-201ENST00000443621 CD163L1Q9NR16 1453 aa3.78□□□□□ -1.8
LINC00393-201ENST00000443621 SMG6Q86US8 1419 aaKnown RBP3.78□□□□□ -1.8
LINC00393-201ENST00000443621 METP08581 1390 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 PLEKHG2Q9H7P9 1386 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 KIF20BQ96Q89 1820 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 RNF123Q5XPI4 1314 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 TTC21AQ8NDW8 1320 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 LTKP29376 864 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 MYT1Q01538 1121 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 PELP1Q8IZL8 1130 aaKnown RBP3.77□□□□□ -1.81
LINC00393-201ENST00000443621 CFAP53Q96M91 514 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 CDK19Q9BWU1 502 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 CARD14Q9BXL6 1004 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 DCCP43146 1447 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 MST1RQ04912 1400 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 NSD3Q9BZ95 1437 aa3.77□□□□□ -1.81
LINC00393-201ENST00000443621 A0A1W2PP64 1363 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 USP31Q70CQ4 1352 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 CT47B1P0C2W7 299 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-201ENST00000443621 KCNA4P22459 653 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 SRPK2P78362 688 aaKnown RBP3.76□□□□□ -1.81
LINC00393-201ENST00000443621 HNRNPUQ00839 825 aaKnown RBP eCLIP3.76□□□□□ -1.81
LINC00393-201ENST00000443621 AAMPQ13685 434 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 ARXQ96QS3 562 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 SLC12A5Q9H2X9 1139 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 NUDCQ9Y266 331 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 SSH2Q76I76 1423 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 NRKQ7Z2Y5 1582 aa3.76□□□□□ -1.81
LINC00393-201ENST00000443621 NALCNQ8IZF0 1738 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 FMN2Q9NZ56 1722 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-201ENST00000443621 ZNF521Q96K83 1311 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 PHRF1Q9P1Y6 1649 aaKnown RBP3.75□□□□□ -1.81
LINC00393-201ENST00000443621 FYB1O15117 783 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 KCNA6P17658 529 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 WDR43Q15061 677 aaKnown RBP eCLIP3.75□□□□□ -1.81
LINC00393-201ENST00000443621 MORC1Q86VD1 984 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 ZNF428Q96B54 188 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 NUDT16Q96DE0 195 aaKnown RBP3.75□□□□□ -1.81
LINC00393-201ENST00000443621 AMOTL2Q9Y2J4 779 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 PPIP5K1Q6PFW1 1433 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 PTPRUQ92729 1446 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 ROBO2Q9HCK4 1378 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 SHPRHQ149N8 1683 aa3.75□□□□□ -1.81
LINC00393-201ENST00000443621 CDK12Q9NYV4 1490 aaPredicted RBP3.74□□□□□ -1.81
LINC00393-201ENST00000443621 NPHP4O75161 1426 aaPredicted RBP3.74□□□□□ -1.81
LINC00393-201ENST00000443621 FCHSD2O94868 740 aa3.74□□□□□ -1.81
LINC00393-201ENST00000443621 NEFLP07196 543 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms