RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
ATG4C-205ENST00000443289 DDX17Q92841 729 aaKnown RBP23.81■■□□□ 1.4
ATG4C-205ENST00000443289 NHSL1Q5SYE7 1610 aa23.81■■□□□ 1.4
ATG4C-205ENST00000443289 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
ATG4C-205ENST00000443289 SHPRHQ149N8 1683 aa23.79■■□□□ 1.4
ATG4C-205ENST00000443289 MEX3CQ5U5Q3 659 aaKnown RBP23.79■■□□□ 1.4
ATG4C-205ENST00000443289 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
ATG4C-205ENST00000443289 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
ATG4C-205ENST00000443289 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
ATG4C-205ENST00000443289 LAMC1P11047 1609 aa23.78■■□□□ 1.4
ATG4C-205ENST00000443289 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
ATG4C-205ENST00000443289 POTEAQ6S8J7 498 aa23.77■■□□□ 1.4
ATG4C-205ENST00000443289 ESCO1Q5FWF5 840 aa23.76■■□□□ 1.39
ATG4C-205ENST00000443289 LRP6O75581 1613 aa23.75■■□□□ 1.39
ATG4C-205ENST00000443289 NUTM2BA6NNL0 878 aaPredicted RBP23.75■■□□□ 1.39
ATG4C-205ENST00000443289 NUTM2EB1AL46 878 aaPredicted RBP23.75■■□□□ 1.39
ATG4C-205ENST00000443289 NUTM2AQ8IVF1 878 aaPredicted RBP23.75■■□□□ 1.39
ATG4C-205ENST00000443289 SOS2Q07890 1332 aaPredicted RBP23.75■■□□□ 1.39
ATG4C-205ENST00000443289 PRAM1Q96QH2 718 aa23.72■■□□□ 1.39
ATG4C-205ENST00000443289 NPHP3Q7Z494 1330 aa23.72■■□□□ 1.39
ATG4C-205ENST00000443289 PNPLA6Q8IY17 1366 aa23.72■■□□□ 1.39
ATG4C-205ENST00000443289 NUTM2FA1L443 756 aa23.71■■□□□ 1.39
ATG4C-205ENST00000443289 ZNF772Q68DY9 489 aaPredicted RBP23.71■■□□□ 1.39
ATG4C-205ENST00000443289 POGKQ9P215 609 aa23.71■■□□□ 1.39
ATG4C-205ENST00000443289 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
ATG4C-205ENST00000443289 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
ATG4C-205ENST00000443289 DLC1Q96QB1 1528 aa23.68■■□□□ 1.38
ATG4C-205ENST00000443289 ADGRB1O14514 1584 aa23.67■■□□□ 1.38
ATG4C-205ENST00000443289 FOXO3O43524 673 aa23.67■■□□□ 1.38
ATG4C-205ENST00000443289 SAFB2Q14151 953 aaKnown RBP eCLIP23.67■■□□□ 1.38
ATG4C-205ENST00000443289 FMN2Q9NZ56 1722 aa23.63■■□□□ 1.37
ATG4C-205ENST00000443289 AFF2P51816 1311 aa23.61■■□□□ 1.37
ATG4C-205ENST00000443289 PXDNQ92626 1479 aa23.61■■□□□ 1.37
ATG4C-205ENST00000443289 XPCQ01831 940 aaPredicted RBP23.6■■□□□ 1.37
ATG4C-205ENST00000443289 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
ATG4C-205ENST00000443289 PHF8Q9UPP1 1060 aa23.6■■□□□ 1.37
ATG4C-205ENST00000443289 ADAMTS2O95450 1211 aa23.58■■□□□ 1.37
ATG4C-205ENST00000443289 RXRBP28702 533 aa23.57■■□□□ 1.36
ATG4C-205ENST00000443289 KRT28Q7Z3Y7 464 aa23.57■■□□□ 1.36
ATG4C-205ENST00000443289 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
ATG4C-205ENST00000443289 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
ATG4C-205ENST00000443289 MINK1Q8N4C8 1332 aaPredicted RBP23.57■■□□□ 1.36
ATG4C-205ENST00000443289 PSME1Q06323 249 aa23.56■■□□□ 1.36
ATG4C-205ENST00000443289 HIRIP3Q9BW71 556 aaPredicted RBP23.56■■□□□ 1.36
ATG4C-205ENST00000443289 ANKARQ7Z5J8 1434 aa23.56■■□□□ 1.36
ATG4C-205ENST00000443289 EIF3AQ14152 1382 aaKnown RBP23.54■■□□□ 1.36
ATG4C-205ENST00000443289 ADGRB2O60241 1585 aa23.54■■□□□ 1.36
ATG4C-205ENST00000443289 COL22A1Q8NFW1 1626 aaPredicted RBP23.54■■□□□ 1.36
ATG4C-205ENST00000443289 SPATA31A3Q5VYP0 1347 aa23.54■■□□□ 1.36
ATG4C-205ENST00000443289 WASLO00401 505 aaPredicted RBP23.53■■□□□ 1.36
ATG4C-205ENST00000443289 QTRT2Q9H974 415 aaKnown RBP23.52■■□□□ 1.36
ATG4C-205ENST00000443289 PMFBP1Q8TBY8 1022 aa23.5■■□□□ 1.35
ATG4C-205ENST00000443289 L3MBTL2Q969R5 705 aa23.5■■□□□ 1.35
ATG4C-205ENST00000443289 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
ATG4C-205ENST00000443289 RGPD8O14715 1765 aaPredicted RBP23.5■■□□□ 1.35
ATG4C-205ENST00000443289 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
ATG4C-205ENST00000443289 FNBP4Q8N3X1 1017 aaPredicted RBP23.49■■□□□ 1.35
ATG4C-205ENST00000443289 SIN3AQ96ST3 1273 aa23.49■■□□□ 1.35
ATG4C-205ENST00000443289 SBNO1A3KN83 1393 aa23.48■■□□□ 1.35
ATG4C-205ENST00000443289 RBM6P78332 1123 aaKnown RBP23.47■■□□□ 1.35
ATG4C-205ENST00000443289 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
ATG4C-205ENST00000443289 USP21Q9UK80 565 aa23.47■■□□□ 1.35
ATG4C-205ENST00000443289 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
ATG4C-205ENST00000443289 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
ATG4C-205ENST00000443289 CDK12Q9NYV4 1490 aaPredicted RBP23.46■■□□□ 1.35
ATG4C-205ENST00000443289 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
ATG4C-205ENST00000443289 USP32Q8NFA0 1604 aa23.45■■□□□ 1.34
ATG4C-205ENST00000443289 TNS3Q68CZ2 1445 aa23.45■■□□□ 1.34
ATG4C-205ENST00000443289 TRPC5Q9UL62 973 aaPredicted RBP23.44■■□□□ 1.34
ATG4C-205ENST00000443289 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
ATG4C-205ENST00000443289 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
ATG4C-205ENST00000443289 LMOD2Q6P5Q4 547 aa23.42■■□□□ 1.34
ATG4C-205ENST00000443289 NUDT16Q96DE0 195 aaKnown RBP23.42■■□□□ 1.34
ATG4C-205ENST00000443289 CDK19Q9BWU1 502 aa23.42■■□□□ 1.34
ATG4C-205ENST00000443289 HAP1P54257 671 aaPredicted RBP23.41■■□□□ 1.34
ATG4C-205ENST00000443289 NGDNQ8NEJ9 315 aaKnown RBP23.41■■□□□ 1.34
ATG4C-205ENST00000443289 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
ATG4C-205ENST00000443289 ATRNO75882 1429 aa23.37■■□□□ 1.33
ATG4C-205ENST00000443289 CABLES1Q8TDN4 633 aa23.37■■□□□ 1.33
ATG4C-205ENST00000443289 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
ATG4C-205ENST00000443289 CCDC61Q9Y6R9 512 aa23.36■■□□□ 1.33
ATG4C-205ENST00000443289 MARF1Q9Y4F3 1742 aaKnown RBP23.36■■□□□ 1.33
ATG4C-205ENST00000443289 ATP7BP35670 1465 aa23.36■■□□□ 1.33
ATG4C-205ENST00000443289 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
ATG4C-205ENST00000443289 UNC5CLQ8IV45 518 aa23.34■■□□□ 1.33
ATG4C-205ENST00000443289 RGS12O14924 1447 aa23.33■■□□□ 1.33
ATG4C-205ENST00000443289 PAK3O75914 559 aaPredicted RBP23.33■■□□□ 1.33
ATG4C-205ENST00000443289 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.33
ATG4C-205ENST00000443289 PLEKHG3A1L390 1219 aa23.32■■□□□ 1.32
ATG4C-205ENST00000443289 SLIT2O94813 1529 aa23.32■■□□□ 1.32
ATG4C-205ENST00000443289 ITSN1Q15811 1721 aa23.31■■□□□ 1.32
ATG4C-205ENST00000443289 SRPK2P78362 688 aaKnown RBP23.31■■□□□ 1.32
ATG4C-205ENST00000443289 GJD4Q96KN9 370 aaPredicted RBP23.31■■□□□ 1.32
ATG4C-205ENST00000443289 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
ATG4C-205ENST00000443289 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
ATG4C-205ENST00000443289 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
ATG4C-205ENST00000443289 ACEP12821 1306 aa23.29■■□□□ 1.32
ATG4C-205ENST00000443289 POLR3AO14802 1390 aaPredicted RBP23.28■■□□□ 1.32
ATG4C-205ENST00000443289 TRPM1Q7Z4N2 1603 aa23.28■■□□□ 1.32
ATG4C-205ENST00000443289 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms