RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
ATG4C-205ENST00000443289 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.32
ATG4C-205ENST00000443289 ABCC9O60706 1549 aa35.42■■■■□ 3.26
ATG4C-205ENST00000443289 RB1CC1Q8TDY2 1594 aa33.9■■■■□ 3.02
ATG4C-205ENST00000443289 NACADO15069 1562 aa33.78■■■■□ 3
ATG4C-205ENST00000443289 DCAF8L2P0C7V8 631 aa33.75■■■□□ 2.99
ATG4C-205ENST00000443289 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
ATG4C-205ENST00000443289 ZCCHC6Q5VYS8 1495 aaKnown RBP33.29■■■□□ 2.92
ATG4C-205ENST00000443289 DCAF1Q9Y4B6 1507 aa33.17■■■□□ 2.9
ATG4C-205ENST00000443289 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
ATG4C-205ENST00000443289 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
ATG4C-205ENST00000443289 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
ATG4C-205ENST00000443289 BICRAQ9NZM4 1560 aa32.85■■■□□ 2.85
ATG4C-205ENST00000443289 SCRIBQ14160 1630 aa32.6■■■□□ 2.81
ATG4C-205ENST00000443289 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
ATG4C-205ENST00000443289 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
ATG4C-205ENST00000443289 CC2D2AQ9P2K1 1620 aa32■■■□□ 2.71
ATG4C-205ENST00000443289 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
ATG4C-205ENST00000443289 NCAPD3P42695 1498 aa31.2■■■□□ 2.58
ATG4C-205ENST00000443289 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
ATG4C-205ENST00000443289 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.57
ATG4C-205ENST00000443289 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
ATG4C-205ENST00000443289 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
ATG4C-205ENST00000443289 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
ATG4C-205ENST00000443289 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
ATG4C-205ENST00000443289 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
ATG4C-205ENST00000443289 BAZ1BQ9UIG0 1483 aaKnown RBP30.85■■■□□ 2.53
ATG4C-205ENST00000443289 ERCC6Q03468 1493 aa30.59■■■□□ 2.49
ATG4C-205ENST00000443289 NESP48681 1621 aa30.52■■■□□ 2.48
ATG4C-205ENST00000443289 WIZO95785 1651 aa30.49■■■□□ 2.47
ATG4C-205ENST00000443289 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
ATG4C-205ENST00000443289 CUX2O14529 1486 aa30.41■■■□□ 2.46
ATG4C-205ENST00000443289 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
ATG4C-205ENST00000443289 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
ATG4C-205ENST00000443289 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
ATG4C-205ENST00000443289 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
ATG4C-205ENST00000443289 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
ATG4C-205ENST00000443289 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
ATG4C-205ENST00000443289 DNAJC5Q9H3Z4 198 aa30.01■■■□□ 2.39
ATG4C-205ENST00000443289 CFTRP13569 1480 aa29.99■■■□□ 2.39
ATG4C-205ENST00000443289 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
ATG4C-205ENST00000443289 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
ATG4C-205ENST00000443289 CEP164Q9UPV0 1460 aa29.9■■■□□ 2.38
ATG4C-205ENST00000443289 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
ATG4C-205ENST00000443289 WDR62O43379 1518 aa29.82■■■□□ 2.36
ATG4C-205ENST00000443289 PRDM2Q13029 1718 aa29.62■■■□□ 2.33
ATG4C-205ENST00000443289 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
ATG4C-205ENST00000443289 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
ATG4C-205ENST00000443289 SUPT5HO00267 1087 aaKnown RBP29.39■■■□□ 2.3
ATG4C-205ENST00000443289 TOPBP1Q92547 1522 aa29.37■■■□□ 2.29
ATG4C-205ENST00000443289 IFT140Q96RY7 1462 aa29.31■■■□□ 2.28
ATG4C-205ENST00000443289 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
ATG4C-205ENST00000443289 ZNF608Q9ULD9 1512 aaPredicted RBP29.18■■■□□ 2.26
ATG4C-205ENST00000443289 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
ATG4C-205ENST00000443289 POLA1P09884 1462 aaPredicted RBP29.09■■■□□ 2.25
ATG4C-205ENST00000443289 TARBP1Q13395 1621 aaKnown RBP29.05■■■□□ 2.24
ATG4C-205ENST00000443289 SOGA1O94964 1423 aa29.02■■■□□ 2.24
ATG4C-205ENST00000443289 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.23
ATG4C-205ENST00000443289 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.23
ATG4C-205ENST00000443289 CUX1P39880 1505 aa28.99■■■□□ 2.23
ATG4C-205ENST00000443289 RAD54L2Q9Y4B4 1467 aa28.97■■■□□ 2.23
ATG4C-205ENST00000443289 FGD5Q6ZNL6 1462 aa28.96■■■□□ 2.23
ATG4C-205ENST00000443289 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
ATG4C-205ENST00000443289 TRIM41Q8WV44 630 aa28.82■■■□□ 2.2
ATG4C-205ENST00000443289 WDR97A6NE52 1622 aa28.82■■■□□ 2.2
ATG4C-205ENST00000443289 FBLN2P98095 1184 aa28.77■■■□□ 2.2
ATG4C-205ENST00000443289 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
ATG4C-205ENST00000443289 WRNQ14191 1432 aaPredicted RBP eCLIP28.69■■■□□ 2.18
ATG4C-205ENST00000443289 CHD1O14646 1710 aa28.69■■■□□ 2.18
ATG4C-205ENST00000443289 SNAPC4Q5SXM2 1469 aa28.69■■■□□ 2.18
ATG4C-205ENST00000443289 ABCA10Q8WWZ4 1543 aa28.68■■■□□ 2.18
ATG4C-205ENST00000443289 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
ATG4C-205ENST00000443289 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
ATG4C-205ENST00000443289 GAPVD1Q14C86 1478 aa28.65■■■□□ 2.18
ATG4C-205ENST00000443289 TOP2BQ02880 1626 aa28.63■■■□□ 2.17
ATG4C-205ENST00000443289 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
ATG4C-205ENST00000443289 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
ATG4C-205ENST00000443289 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
ATG4C-205ENST00000443289 BIVM-ERCC5R4GMW8 1640 aa28.6■■■□□ 2.17
ATG4C-205ENST00000443289 ARHGEF11O15085 1522 aa28.59■■■□□ 2.17
ATG4C-205ENST00000443289 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
ATG4C-205ENST00000443289 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
ATG4C-205ENST00000443289 ABCA5Q8WWZ7 1642 aa28.54■■■□□ 2.16
ATG4C-205ENST00000443289 PBRM1Q86U86 1689 aa28.51■■■□□ 2.16
ATG4C-205ENST00000443289 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
ATG4C-205ENST00000443289 CLASP1Q7Z460 1538 aa28.42■■■□□ 2.14
ATG4C-205ENST00000443289 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
ATG4C-205ENST00000443289 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
ATG4C-205ENST00000443289 FHAD1B1AJZ9 1412 aa28.32■■■□□ 2.12
ATG4C-205ENST00000443289 GRIN2AQ12879 1464 aa28.31■■■□□ 2.12
ATG4C-205ENST00000443289 ADAMTS12P58397 1594 aa28.3■■■□□ 2.12
ATG4C-205ENST00000443289 NUP160Q12769 1436 aa28.21■■■□□ 2.11
ATG4C-205ENST00000443289 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
ATG4C-205ENST00000443289 CEP170Q5SW79 1584 aa28.15■■■□□ 2.1
ATG4C-205ENST00000443289 IGF1RP08069 1367 aa28.09■■■□□ 2.09
ATG4C-205ENST00000443289 JPH4Q96JJ6 628 aa28■■■□□ 2.07
ATG4C-205ENST00000443289 SHROOM2Q13796 1616 aa28■■■□□ 2.07
ATG4C-205ENST00000443289 TRHP20396 242 aaPredicted RBP27.99■■■□□ 2.07
ATG4C-205ENST00000443289 ERCC6L2Q5T890 1561 aa27.98■■■□□ 2.07
ATG4C-205ENST00000443289 CUL7Q14999 1698 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms