RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 LRP6O75581 1613 aa27.78■■■□□ 2.04
HMGB3P22-201ENST00000442010 SPATA31A6Q5VVP1 1343 aa27.77■■■□□ 2.04
HMGB3P22-201ENST00000442010 SIRT1Q96EB6 747 aa27.76■■■□□ 2.03
HMGB3P22-201ENST00000442010 DDX17Q92841 729 aaKnown RBP27.75■■■□□ 2.03
HMGB3P22-201ENST00000442010 ADGRB1O14514 1584 aa27.74■■■□□ 2.03
HMGB3P22-201ENST00000442010 ORAI2Q96SN7 254 aa27.74■■■□□ 2.03
HMGB3P22-201ENST00000442010 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
HMGB3P22-201ENST00000442010 FMN2Q9NZ56 1722 aa27.72■■■□□ 2.03
HMGB3P22-201ENST00000442010 DCAF11Q8TEB1 546 aa27.7■■■□□ 2.02
HMGB3P22-201ENST00000442010 LRRC59Q96AG4 307 aaKnown RBP27.7■■■□□ 2.02
HMGB3P22-201ENST00000442010 STAC3Q96MF2 364 aa27.7■■■□□ 2.02
HMGB3P22-201ENST00000442010 DLC1Q96QB1 1528 aa27.7■■■□□ 2.02
HMGB3P22-201ENST00000442010 POTEAQ6S8J7 498 aa27.68■■■□□ 2.02
HMGB3P22-201ENST00000442010 KDM2AQ9Y2K7 1162 aa27.68■■■□□ 2.02
HMGB3P22-201ENST00000442010 SOS2Q07890 1332 aaPredicted RBP27.67■■■□□ 2.02
HMGB3P22-201ENST00000442010 RGPD8O14715 1765 aaPredicted RBP27.66■■■□□ 2.02
HMGB3P22-201ENST00000442010 PNPLA6Q8IY17 1366 aa27.66■■■□□ 2.02
HMGB3P22-201ENST00000442010 ESCO1Q5FWF5 840 aa27.62■■■□□ 2.01
HMGB3P22-201ENST00000442010 PRAM1Q96QH2 718 aa27.61■■■□□ 2.01
HMGB3P22-201ENST00000442010 PXDNQ92626 1479 aa27.6■■■□□ 2.01
HMGB3P22-201ENST00000442010 ADGRB2O60241 1585 aa27.59■■■□□ 2.01
HMGB3P22-201ENST00000442010 KIF1AQ12756 1690 aa27.59■■■□□ 2.01
HMGB3P22-201ENST00000442010 KIAA1210Q9ULL0 1709 aa27.58■■■□□ 2.01
HMGB3P22-201ENST00000442010 NUTM2FA1L443 756 aa27.58■■■□□ 2.01
HMGB3P22-201ENST00000442010 NUTM2BA6NNL0 878 aaPredicted RBP27.58■■■□□ 2.01
HMGB3P22-201ENST00000442010 NUTM2EB1AL46 878 aaPredicted RBP27.58■■■□□ 2.01
HMGB3P22-201ENST00000442010 NUTM2AQ8IVF1 878 aaPredicted RBP27.58■■■□□ 2.01
HMGB3P22-201ENST00000442010 COL22A1Q8NFW1 1626 aaPredicted RBP27.58■■■□□ 2.01
HMGB3P22-201ENST00000442010 MEX3CQ5U5Q3 659 aaKnown RBP27.57■■■□□ 2
HMGB3P22-201ENST00000442010 NPHP3Q7Z494 1330 aa27.57■■■□□ 2
HMGB3P22-201ENST00000442010 ARHGEF28Q8N1W1 1705 aaKnown RBP27.56■■■□□ 2
HMGB3P22-201ENST00000442010 SAFB2Q14151 953 aaKnown RBP eCLIP27.55■■■□□ 2
HMGB3P22-201ENST00000442010 TRAK1Q9UPV9 953 aa27.55■■■□□ 2
HMGB3P22-201ENST00000442010 USP32Q8NFA0 1604 aa27.55■■■□□ 2
HMGB3P22-201ENST00000442010 FOXO3O43524 673 aa27.54■■■□□ 2
HMGB3P22-201ENST00000442010 POGKQ9P215 609 aa27.53■■■□□ 2
HMGB3P22-201ENST00000442010 ZNF772Q68DY9 489 aaPredicted RBP27.51■■□□□ 1.99
HMGB3P22-201ENST00000442010 XPCQ01831 940 aaPredicted RBP27.48■■□□□ 1.99
HMGB3P22-201ENST00000442010 ANKARQ7Z5J8 1434 aa27.48■■□□□ 1.99
HMGB3P22-201ENST00000442010 AFF2P51816 1311 aa27.46■■□□□ 1.99
HMGB3P22-201ENST00000442010 MARF1Q9Y4F3 1742 aaKnown RBP27.46■■□□□ 1.99
HMGB3P22-201ENST00000442010 PHF8Q9UPP1 1060 aa27.45■■□□□ 1.98
HMGB3P22-201ENST00000442010 HIRIP3Q9BW71 556 aaPredicted RBP27.44■■□□□ 1.98
HMGB3P22-201ENST00000442010 MINK1Q8N4C8 1332 aaPredicted RBP27.43■■□□□ 1.98
HMGB3P22-201ENST00000442010 C8orf37Q96NL8 207 aa27.43■■□□□ 1.98
HMGB3P22-201ENST00000442010 SIN3AQ96ST3 1273 aa27.43■■□□□ 1.98
HMGB3P22-201ENST00000442010 TULP4Q9NRJ4 1543 aa27.42■■□□□ 1.98
HMGB3P22-201ENST00000442010 SPATA31A3Q5VYP0 1347 aa27.41■■□□□ 1.98
HMGB3P22-201ENST00000442010 ADAMTS2O95450 1211 aa27.41■■□□□ 1.98
HMGB3P22-201ENST00000442010 NBPF1Q3BBV0 1214 aa27.41■■□□□ 1.98
HMGB3P22-201ENST00000442010 WASLO00401 505 aaPredicted RBP27.4■■□□□ 1.98
HMGB3P22-201ENST00000442010 KRT28Q7Z3Y7 464 aa27.4■■□□□ 1.98
HMGB3P22-201ENST00000442010 L3MBTL2Q969R5 705 aa27.4■■□□□ 1.98
HMGB3P22-201ENST00000442010 PRR36Q9H6K5 1346 aa27.4■■□□□ 1.98
HMGB3P22-201ENST00000442010 EIF3AQ14152 1382 aaKnown RBP27.38■■□□□ 1.97
HMGB3P22-201ENST00000442010 TRPM3Q9HCF6 1732 aaPredicted RBP27.37■■□□□ 1.97
HMGB3P22-201ENST00000442010 ITSN1Q15811 1721 aa27.36■■□□□ 1.97
HMGB3P22-201ENST00000442010 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
HMGB3P22-201ENST00000442010 TNS3Q68CZ2 1445 aa27.35■■□□□ 1.97
HMGB3P22-201ENST00000442010 NGLY1Q96IV0 654 aa27.35■■□□□ 1.97
HMGB3P22-201ENST00000442010 TRPM1Q7Z4N2 1603 aa27.34■■□□□ 1.97
HMGB3P22-201ENST00000442010 CDK12Q9NYV4 1490 aaPredicted RBP27.34■■□□□ 1.97
HMGB3P22-201ENST00000442010 RXRBP28702 533 aa27.34■■□□□ 1.97
HMGB3P22-201ENST00000442010 FNBP4Q8N3X1 1017 aaPredicted RBP27.34■■□□□ 1.97
HMGB3P22-201ENST00000442010 PMFBP1Q8TBY8 1022 aa27.34■■□□□ 1.97
HMGB3P22-201ENST00000442010 PSME1Q06323 249 aa27.33■■□□□ 1.97
HMGB3P22-201ENST00000442010 ABCA3Q99758 1704 aa27.33■■□□□ 1.96
HMGB3P22-201ENST00000442010 ATP7BP35670 1465 aa27.32■■□□□ 1.96
HMGB3P22-201ENST00000442010 QTRT2Q9H974 415 aaKnown RBP27.32■■□□□ 1.96
HMGB3P22-201ENST00000442010 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
HMGB3P22-201ENST00000442010 ALS2Q96Q42 1657 aa27.3■■□□□ 1.96
HMGB3P22-201ENST00000442010 NEUROD1Q13562 356 aa27.3■■□□□ 1.96
HMGB3P22-201ENST00000442010 TOPAZ1Q8N9V7 1692 aa27.3■■□□□ 1.96
HMGB3P22-201ENST00000442010 USP21Q9UK80 565 aa27.28■■□□□ 1.96
HMGB3P22-201ENST00000442010 RBM6P78332 1123 aaKnown RBP27.27■■□□□ 1.96
HMGB3P22-201ENST00000442010 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.27■■□□□ 1.96
HMGB3P22-201ENST00000442010 QRICH2Q9H0J4 1663 aa27.27■■□□□ 1.96
HMGB3P22-201ENST00000442010 BCL9LQ86UU0 1499 aa27.26■■□□□ 1.95
HMGB3P22-201ENST00000442010 NUDT16Q96DE0 195 aaKnown RBP27.26■■□□□ 1.95
HMGB3P22-201ENST00000442010 CDK19Q9BWU1 502 aa27.26■■□□□ 1.95
HMGB3P22-201ENST00000442010 ARHGEF10O15013 1369 aa27.25■■□□□ 1.95
HMGB3P22-201ENST00000442010 ATRNO75882 1429 aa27.24■■□□□ 1.95
HMGB3P22-201ENST00000442010 RGS12O14924 1447 aa27.24■■□□□ 1.95
HMGB3P22-201ENST00000442010 GPRASP1Q5JY77 1395 aa27.22■■□□□ 1.95
HMGB3P22-201ENST00000442010 CENPJQ9HC77 1338 aaPredicted RBP27.22■■□□□ 1.95
HMGB3P22-201ENST00000442010 SLIT2O94813 1529 aa27.22■■□□□ 1.95
HMGB3P22-201ENST00000442010 CRYBG1Q9Y4K1 1723 aa27.22■■□□□ 1.95
HMGB3P22-201ENST00000442010 TRPC5Q9UL62 973 aaPredicted RBP27.22■■□□□ 1.95
HMGB3P22-201ENST00000442010 CABLES1Q8TDN4 633 aa27.21■■□□□ 1.95
HMGB3P22-201ENST00000442010 NGDNQ8NEJ9 315 aaKnown RBP27.19■■□□□ 1.94
HMGB3P22-201ENST00000442010 PLCH1Q4KWH8 1693 aa27.18■■□□□ 1.94
HMGB3P22-201ENST00000442010 NBPF8Q3BBV2 869 aa27.18■■□□□ 1.94
HMGB3P22-201ENST00000442010 LMOD2Q6P5Q4 547 aa27.18■■□□□ 1.94
HMGB3P22-201ENST00000442010 CCDC61Q9Y6R9 512 aa27.18■■□□□ 1.94
HMGB3P22-201ENST00000442010 POLR3AO14802 1390 aaPredicted RBP27.18■■□□□ 1.94
HMGB3P22-201ENST00000442010 NWD2Q9ULI1 1742 aa27.18■■□□□ 1.94
HMGB3P22-201ENST00000442010 PLEKHG3A1L390 1219 aa27.16■■□□□ 1.94
HMGB3P22-201ENST00000442010 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
HMGB3P22-201ENST00000442010 UNC5CLQ8IV45 518 aa27.13■■□□□ 1.93
HMGB3P22-201ENST00000442010 UPF1Q92900 1129 aaKnown RBP eCLIP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms