RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 GMPR2Q9P2T1 348 aaKnown RBP8.33□□□□□ -1.08
HMGB3P9-201ENST00000441799 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P9-201ENST00000441799 MMP16P51512 607 aa8.32□□□□□ -1.08
HMGB3P9-201ENST00000441799 AXIN1O15169 862 aa8.31□□□□□ -1.08
HMGB3P9-201ENST00000441799 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
HMGB3P9-201ENST00000441799 WNT7AO00755 349 aa8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 ZBTB24O43167 697 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 SMPD1P17405 629 aa8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 CTC1Q2NKJ3 1217 aa8.3□□□□□ -1.08
HMGB3P9-201ENST00000441799 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 TRIM32Q13049 653 aa8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 GRIPAP1Q4V328 841 aa8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 HLA-CQ95604 372 aa8.29□□□□□ -1.08
HMGB3P9-201ENST00000441799 DXOO77932 396 aaKnown RBP8.28□□□□□ -1.08
HMGB3P9-201ENST00000441799 Q3C1V9 767 aa8.28□□□□□ -1.08
HMGB3P9-201ENST00000441799 C11orf95C9JLR9 678 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 J3QL48 77 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 IRF6O14896 467 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 KDM4AO75164 1064 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 USB1Q9BQ65 265 aaKnown RBP8.27□□□□□ -1.09
HMGB3P9-201ENST00000441799 MDM2Q00987 491 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P9-201ENST00000441799 SKOR1P84550 965 aa8.24□□□□□ -1.09
HMGB3P9-201ENST00000441799 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
HMGB3P9-201ENST00000441799 WFS1O76024 890 aa8.23□□□□□ -1.09
HMGB3P9-201ENST00000441799 ATP13A2Q9NQ11 1180 aa8.23□□□□□ -1.09
HMGB3P9-201ENST00000441799 HOXA2O43364 376 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 SNRPBP14678 240 aaKnown RBP8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 HAP1P54257 671 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 USP46P62068 366 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 GUCA2AQ02747 115 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 HPS1Q92902 700 aa8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P9-201ENST00000441799 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
HMGB3P9-201ENST00000441799 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
HMGB3P9-201ENST00000441799 CCDC24Q8N4L8 307 aa8.2□□□□□ -1.1
HMGB3P9-201ENST00000441799 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P9-201ENST00000441799 CCDC102AQ96A19 550 aa8.19□□□□□ -1.1
HMGB3P9-201ENST00000441799 WNT7BP56706 349 aa8.18□□□□□ -1.1
HMGB3P9-201ENST00000441799 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
HMGB3P9-201ENST00000441799 JUNDP17535 347 aa8.17□□□□□ -1.1
HMGB3P9-201ENST00000441799 TRIM47Q96LD4 638 aa8.17□□□□□ -1.1
HMGB3P9-201ENST00000441799 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
HMGB3P9-201ENST00000441799 SIAH2O43255 324 aa8.16□□□□□ -1.1
HMGB3P9-201ENST00000441799 WIPF1O43516 503 aa8.16□□□□□ -1.1
HMGB3P9-201ENST00000441799 GPCPD1Q9NPB8 672 aa8.16□□□□□ -1.1
HMGB3P9-201ENST00000441799 TERTO14746 1132 aaKnown RBP8.15□□□□□ -1.1
HMGB3P9-201ENST00000441799 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
HMGB3P9-201ENST00000441799 CLCN1P35523 988 aa8.14□□□□□ -1.11
HMGB3P9-201ENST00000441799 SENP2Q9HC62 589 aa8.14□□□□□ -1.11
HMGB3P9-201ENST00000441799 ALDH1A1P00352 501 aa8.13□□□□□ -1.11
HMGB3P9-201ENST00000441799 RETREG3Q86VR2 466 aa8.13□□□□□ -1.11
HMGB3P9-201ENST00000441799 NUDT12Q9BQG2 462 aa8.12□□□□□ -1.11
HMGB3P9-201ENST00000441799 NUTM1Q86Y26 1132 aa8.11□□□□□ -1.11
HMGB3P9-201ENST00000441799 FDX1P10109 184 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 SH3BP2P78314 561 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 STK17AQ9UEE5 414 aa8.1□□□□□ -1.11
HMGB3P9-201ENST00000441799 TULP1O00294 542 aaPredicted RBP8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 TRIM46Q7Z4K8 759 aa8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 SPIRE2Q8WWL2 714 aa8.09□□□□□ -1.11
HMGB3P9-201ENST00000441799 C6orf229H3BNL8 230 aa8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 NDUFV2P19404 249 aa8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 SSTR3P32745 418 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
HMGB3P9-201ENST00000441799 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P9-201ENST00000441799 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
HMGB3P9-201ENST00000441799 EVA1BQ9NVM1 165 aa8.07□□□□□ -1.12
HMGB3P9-201ENST00000441799 CCNYL3P0C7X3 344 aa8.06□□□□□ -1.12
HMGB3P9-201ENST00000441799 MS4A1P11836 297 aa8.06□□□□□ -1.12
HMGB3P9-201ENST00000441799 BMP1P13497 986 aa8.06□□□□□ -1.12
HMGB3P9-201ENST00000441799 MOXD2PA6NHM9 499 aa8.05□□□□□ -1.12
HMGB3P9-201ENST00000441799 CAPN5O15484 640 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P9-201ENST00000441799 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
HMGB3P9-201ENST00000441799 PTPRNQ16849 979 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 BAP1Q92560 729 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 WASF2Q9Y6W5 498 aa8.04□□□□□ -1.12
HMGB3P9-201ENST00000441799 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 KCNH2Q12809 1159 aa8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 NXF1Q9UBU9 619 aaKnown RBP8.03□□□□□ -1.12
HMGB3P9-201ENST00000441799 LINC01559Q495D7 138 aa8.02□□□□□ -1.13
HMGB3P9-201ENST00000441799 BARGINQ6ZT62 677 aa8.02□□□□□ -1.13
HMGB3P9-201ENST00000441799 ARXQ96QS3 562 aa8.01□□□□□ -1.13
HMGB3P9-201ENST00000441799 TLL2Q9Y6L7 1015 aa8.01□□□□□ -1.13
HMGB3P9-201ENST00000441799 GMPRP36959 345 aa8□□□□□ -1.13
HMGB3P9-201ENST00000441799 ZNF511Q8NB15 262 aa8□□□□□ -1.13
HMGB3P9-201ENST00000441799 ZMYND10O75800 440 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 VEGFBP49765 207 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 AMHR2Q16671 573 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 DESI1Q6ICB0 168 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 MPNDQ8N594 471 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 SLC16A10Q8TF71 515 aa7.99□□□□□ -1.13
HMGB3P9-201ENST00000441799 ZFP42Q96MM3 310 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms