RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 DMRT2Q9Y5R5 561 aa29.38■■■□□ 2.29
VPS13B-204ENST00000441350 TULP4Q9NRJ4 1543 aa29.36■■■□□ 2.29
VPS13B-204ENST00000441350 MINK1Q8N4C8 1332 aaPredicted RBP29.35■■■□□ 2.29
VPS13B-204ENST00000441350 CDCA8Q53HL2 280 aa29.34■■■□□ 2.29
VPS13B-204ENST00000441350 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
VPS13B-204ENST00000441350 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.34■■■□□ 2.29
VPS13B-204ENST00000441350 STRCP1A6NGW2 1772 aa29.34■■■□□ 2.29
VPS13B-204ENST00000441350 EVC2Q86UK5 1308 aa29.33■■■□□ 2.29
VPS13B-204ENST00000441350 NKTRP30414 1462 aaKnown RBP29.33■■■□□ 2.29
VPS13B-204ENST00000441350 ADGRB2O60241 1585 aa29.31■■■□□ 2.28
VPS13B-204ENST00000441350 PUS7Q96PZ0 661 aaKnown RBP29.29■■■□□ 2.28
VPS13B-204ENST00000441350 POLR3GLQ9BT43 218 aa29.28■■■□□ 2.28
VPS13B-204ENST00000441350 DDX10Q13206 875 aaKnown RBP29.27■■■□□ 2.28
VPS13B-204ENST00000441350 WASLO00401 505 aaPredicted RBP29.24■■■□□ 2.27
VPS13B-204ENST00000441350 CDK19Q9BWU1 502 aa29.24■■■□□ 2.27
VPS13B-204ENST00000441350 PROSER2Q86WR7 435 aaPredicted RBP29.23■■■□□ 2.27
VPS13B-204ENST00000441350 CABP2Q9NPB3 220 aa29.22■■■□□ 2.27
VPS13B-204ENST00000441350 ZNF335Q9H4Z2 1342 aaPredicted RBP29.22■■■□□ 2.27
VPS13B-204ENST00000441350 NALCNQ8IZF0 1738 aa29.22■■■□□ 2.27
VPS13B-204ENST00000441350 MYOM1P52179 1685 aa29.21■■■□□ 2.27
VPS13B-204ENST00000441350 SRPK2P78362 688 aaKnown RBP29.2■■■□□ 2.27
VPS13B-204ENST00000441350 ADGRL3Q9HAR2 1447 aa29.2■■■□□ 2.26
VPS13B-204ENST00000441350 RBM33Q96EV2 1170 aaKnown RBP29.2■■■□□ 2.26
VPS13B-204ENST00000441350 NCOA3Q9Y6Q9 1424 aa29.18■■■□□ 2.26
VPS13B-204ENST00000441350 DIEXFQ68CQ4 756 aaKnown RBP29.17■■■□□ 2.26
VPS13B-204ENST00000441350 ATAD2Q6PL18 1390 aa29.17■■■□□ 2.26
VPS13B-204ENST00000441350 TMEM94Q12767 1356 aa29.16■■■□□ 2.26
VPS13B-204ENST00000441350 CDC42BPGQ6DT37 1551 aa29.15■■■□□ 2.26
VPS13B-204ENST00000441350 LRRC7Q96NW7 1537 aa29.13■■■□□ 2.25
VPS13B-204ENST00000441350 FMN2Q9NZ56 1722 aa29.11■■■□□ 2.25
VPS13B-204ENST00000441350 XIRP1Q702N8 1843 aaKnown RBP29.11■■■□□ 2.25
VPS13B-204ENST00000441350 ATP7BP35670 1465 aa29.11■■■□□ 2.25
VPS13B-204ENST00000441350 NINLQ9Y2I6 1382 aa29.11■■■□□ 2.25
VPS13B-204ENST00000441350 C14orf37Q86TY3 774 aa29.1■■■□□ 2.25
VPS13B-204ENST00000441350 NUDT16Q96DE0 195 aaKnown RBP29.1■■■□□ 2.25
VPS13B-204ENST00000441350 PRR36Q9H6K5 1346 aa29.1■■■□□ 2.25
VPS13B-204ENST00000441350 SLC12A5Q9H2X9 1139 aa29.09■■■□□ 2.25
VPS13B-204ENST00000441350 C19orf44Q9H6X5 657 aa29.09■■■□□ 2.25
VPS13B-204ENST00000441350 PANK3Q9H999 370 aa29.09■■■□□ 2.25
VPS13B-204ENST00000441350 USP32Q8NFA0 1604 aa29.08■■■□□ 2.25
VPS13B-204ENST00000441350 TMC1Q8TDI8 760 aa29.08■■■□□ 2.25
VPS13B-204ENST00000441350 CCDC61Q9Y6R9 512 aa29.07■■■□□ 2.24
VPS13B-204ENST00000441350 ANKARQ7Z5J8 1434 aa29.06■■■□□ 2.24
VPS13B-204ENST00000441350 TOPAZ1Q8N9V7 1692 aa29.06■■■□□ 2.24
VPS13B-204ENST00000441350 LTBP4Q8N2S1 1624 aa29.05■■■□□ 2.24
VPS13B-204ENST00000441350 DCCP43146 1447 aa29.04■■■□□ 2.24
VPS13B-204ENST00000441350 CABP1Q9NZU7 370 aa29.03■■■□□ 2.24
VPS13B-204ENST00000441350 PPIP5K1Q6PFW1 1433 aa29.03■■■□□ 2.24
VPS13B-204ENST00000441350 PER1O15534 1290 aaPredicted RBP29.02■■■□□ 2.24
VPS13B-204ENST00000441350 RGPD8O14715 1765 aaPredicted RBP29.02■■■□□ 2.24
VPS13B-204ENST00000441350 NUTM2FA1L443 756 aa29.02■■■□□ 2.24
VPS13B-204ENST00000441350 ITSN1Q15811 1721 aa29.01■■■□□ 2.23
VPS13B-204ENST00000441350 CD163L1Q9NR16 1453 aa29.01■■■□□ 2.23
VPS13B-204ENST00000441350 ANKRD36BQ8N2N9 1353 aa29.01■■■□□ 2.23
VPS13B-204ENST00000441350 MSH6P52701 1360 aa28.99■■■□□ 2.23
VPS13B-204ENST00000441350 PLEKHG3A1L390 1219 aa28.98■■■□□ 2.23
VPS13B-204ENST00000441350 CARD14Q9BXL6 1004 aa28.98■■■□□ 2.23
VPS13B-204ENST00000441350 TERF2IPQ9NYB0 399 aa28.97■■■□□ 2.23
VPS13B-204ENST00000441350 A0A1W2PP64 1363 aa28.96■■■□□ 2.23
VPS13B-204ENST00000441350 ATF3P18847 181 aa28.96■■■□□ 2.23
VPS13B-204ENST00000441350 CPSF1Q10570 1443 aaKnown RBP28.95■■■□□ 2.23
VPS13B-204ENST00000441350 CADPS2Q86UW7 1296 aa28.94■■■□□ 2.22
VPS13B-204ENST00000441350 MST1RQ04912 1400 aa28.92■■■□□ 2.22
VPS13B-204ENST00000441350 HDGFL2Q7Z4V5 671 aaPredicted RBP28.92■■■□□ 2.22
VPS13B-204ENST00000441350 KNSTRNQ9Y448 316 aa28.91■■■□□ 2.22
VPS13B-204ENST00000441350 C1orf167Q5SNV9 1468 aa28.91■■■□□ 2.22
VPS13B-204ENST00000441350 AKAP12Q02952 1782 aa28.91■■■□□ 2.22
VPS13B-204ENST00000441350 POLR3AO14802 1390 aaPredicted RBP28.9■■■□□ 2.22
VPS13B-204ENST00000441350 NSD3Q9BZ95 1437 aa28.9■■■□□ 2.22
VPS13B-204ENST00000441350 ACEP12821 1306 aa28.89■■■□□ 2.21
VPS13B-204ENST00000441350 MON2Q7Z3U7 1717 aa28.87■■■□□ 2.21
VPS13B-204ENST00000441350 AMER1Q5JTC6 1135 aaPredicted RBP28.87■■■□□ 2.21
VPS13B-204ENST00000441350 ZNF692Q9BU19 519 aaPredicted RBP28.87■■■□□ 2.21
VPS13B-204ENST00000441350 PMFBP1Q8TBY8 1022 aa28.87■■■□□ 2.21
VPS13B-204ENST00000441350 PHF8Q9UPP1 1060 aa28.87■■■□□ 2.21
VPS13B-204ENST00000441350 KTN1Q86UP2 1357 aaKnown RBP28.85■■■□□ 2.21
VPS13B-204ENST00000441350 NPC1L1Q9UHC9 1359 aa28.85■■■□□ 2.21
VPS13B-204ENST00000441350 ANP32CO43423 234 aa28.85■■■□□ 2.21
VPS13B-204ENST00000441350 ESCO1Q5FWF5 840 aa28.85■■■□□ 2.21
VPS13B-204ENST00000441350 ORAI2Q96SN7 254 aa28.84■■■□□ 2.21
VPS13B-204ENST00000441350 MIER1Q8N108 512 aa28.83■■■□□ 2.21
VPS13B-204ENST00000441350 NGDNQ8NEJ9 315 aaKnown RBP28.83■■■□□ 2.21
VPS13B-204ENST00000441350 EDC4Q6P2E9 1401 aaKnown RBP28.83■■■□□ 2.2
VPS13B-204ENST00000441350 PRKRIP1Q9H875 184 aaPredicted RBP28.82■■■□□ 2.2
VPS13B-204ENST00000441350 USP6P35125 1406 aa28.81■■■□□ 2.2
VPS13B-204ENST00000441350 KIF1AQ12756 1690 aa28.81■■■□□ 2.2
VPS13B-204ENST00000441350 CGNL1Q0VF96 1302 aa28.8■■■□□ 2.2
VPS13B-204ENST00000441350 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
VPS13B-204ENST00000441350 NRKQ7Z2Y5 1582 aa28.79■■■□□ 2.2
VPS13B-204ENST00000441350 SSH2Q76I76 1423 aa28.79■■■□□ 2.2
VPS13B-204ENST00000441350 CC2D1BQ5T0F9 858 aaKnown RBP28.78■■■□□ 2.2
VPS13B-204ENST00000441350 PARD3Q8TEW0 1356 aa28.76■■■□□ 2.19
VPS13B-204ENST00000441350 NSD2O96028 1365 aa28.75■■■□□ 2.19
VPS13B-204ENST00000441350 FYB1O15117 783 aa28.74■■■□□ 2.19
VPS13B-204ENST00000441350 CNGB1Q14028 1251 aaPredicted RBP28.74■■■□□ 2.19
VPS13B-204ENST00000441350 RALBP1Q15311 655 aa28.74■■■□□ 2.19
VPS13B-204ENST00000441350 TTC21BQ7Z4L5 1316 aa28.74■■■□□ 2.19
VPS13B-204ENST00000441350 KIF20BQ96Q89 1820 aa28.73■■■□□ 2.19
VPS13B-204ENST00000441350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.72■■■□□ 2.19
VPS13B-204ENST00000441350 BRD4O60885 1362 aaPredicted RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms