RNA–Protein interactions for RNA: ENST00000439890.3

NANOGP9-201, Transcript of Nanog homeobox pseudogene 9, humanhuman

BASIC

Gene NANOGP9, Length 892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP9-201ENST00000439890 SPRYD7Q5W111 196 aa11.5□□□□□ -0.57
NANOGP9-201ENST00000439890 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
NANOGP9-201ENST00000439890 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
NANOGP9-201ENST00000439890 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
NANOGP9-201ENST00000439890 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
NANOGP9-201ENST00000439890 ZNF598Q86UK7 904 aaKnown RBP11.48□□□□□ -0.57
NANOGP9-201ENST00000439890 ZBTB24O43167 697 aaPredicted RBP11.47□□□□□ -0.57
NANOGP9-201ENST00000439890 FDX1P10109 184 aa11.47□□□□□ -0.57
NANOGP9-201ENST00000439890 C6orf229H3BNL8 230 aa11.46□□□□□ -0.57
NANOGP9-201ENST00000439890 SPIRE2Q8WWL2 714 aa11.46□□□□□ -0.57
NANOGP9-201ENST00000439890 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.57
NANOGP9-201ENST00000439890 TNFRSF10AO00220 468 aa11.44□□□□□ -0.58
NANOGP9-201ENST00000439890 PDE4DQ08499 809 aa11.44□□□□□ -0.58
NANOGP9-201ENST00000439890 CCDC24Q8N4L8 307 aa11.44□□□□□ -0.58
NANOGP9-201ENST00000439890 NDUFV2P19404 249 aa11.43□□□□□ -0.58
NANOGP9-201ENST00000439890 FOXC1Q12948 553 aa11.43□□□□□ -0.58
NANOGP9-201ENST00000439890 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
NANOGP9-201ENST00000439890 CD2BP2O95400 341 aaKnown RBP11.42□□□□□ -0.58
NANOGP9-201ENST00000439890 MS4A1P11836 297 aa11.42□□□□□ -0.58
NANOGP9-201ENST00000439890 RPIAP49247 311 aa11.42□□□□□ -0.58
NANOGP9-201ENST00000439890 MMP16P51512 607 aa11.42□□□□□ -0.58
NANOGP9-201ENST00000439890 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
NANOGP9-201ENST00000439890 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
NANOGP9-201ENST00000439890 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
NANOGP9-201ENST00000439890 DIXDC1Q155Q3 683 aa11.4□□□□□ -0.58
NANOGP9-201ENST00000439890 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.58
NANOGP9-201ENST00000439890 PCDHGC3Q9UN70 934 aa11.4□□□□□ -0.58
NANOGP9-201ENST00000439890 JUNDP17535 347 aa11.39□□□□□ -0.59
NANOGP9-201ENST00000439890 PKDCCQ504Y2 493 aa11.38□□□□□ -0.59
NANOGP9-201ENST00000439890 PRR20EP86478 221 aa11.37□□□□□ -0.59
NANOGP9-201ENST00000439890 PRR20CP86479 221 aa11.37□□□□□ -0.59
NANOGP9-201ENST00000439890 PRR20DP86480 221 aa11.37□□□□□ -0.59
NANOGP9-201ENST00000439890 PRR20BP86481 221 aa11.37□□□□□ -0.59
NANOGP9-201ENST00000439890 PRR20AP86496 221 aa11.37□□□□□ -0.59
NANOGP9-201ENST00000439890 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
NANOGP9-201ENST00000439890 FAM187AA6NFU0 413 aa11.36□□□□□ -0.59
NANOGP9-201ENST00000439890 TRIM32Q13049 653 aa11.35□□□□□ -0.59
NANOGP9-201ENST00000439890 MTMR2Q13614 643 aa11.35□□□□□ -0.59
NANOGP9-201ENST00000439890 GDF9O60383 454 aa11.34□□□□□ -0.59
NANOGP9-201ENST00000439890 CSPP1Q1MSJ5 1256 aa11.34□□□□□ -0.59
NANOGP9-201ENST00000439890 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
NANOGP9-201ENST00000439890 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
NANOGP9-201ENST00000439890 PRR7Q8TB68 274 aa11.33□□□□□ -0.6
NANOGP9-201ENST00000439890 PKD2L1Q9P0L9 805 aa11.32□□□□□ -0.6
NANOGP9-201ENST00000439890 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
NANOGP9-201ENST00000439890 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
NANOGP9-201ENST00000439890 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
NANOGP9-201ENST00000439890 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
NANOGP9-201ENST00000439890 SPTLC1O15269 473 aa11.29□□□□□ -0.6
NANOGP9-201ENST00000439890 DGAT1O75907 488 aa11.29□□□□□ -0.6
NANOGP9-201ENST00000439890 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
NANOGP9-201ENST00000439890 GJA5P36382 358 aa11.29□□□□□ -0.6
NANOGP9-201ENST00000439890 TTC24A2A3L6 582 aaPredicted RBP11.28□□□□□ -0.6
NANOGP9-201ENST00000439890 LCE2BO14633 110 aa11.28□□□□□ -0.6
NANOGP9-201ENST00000439890 TSC1Q92574 1164 aa11.28□□□□□ -0.6
NANOGP9-201ENST00000439890 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
NANOGP9-201ENST00000439890 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
NANOGP9-201ENST00000439890 NUTM2BA6NNL0 878 aaPredicted RBP11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 NUTM2EB1AL46 878 aaPredicted RBP11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 PTPRNQ16849 979 aa11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 NUTM2DQ5VT03 806 aaPredicted RBP11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 NUTM2AQ8IVF1 878 aaPredicted RBP11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
NANOGP9-201ENST00000439890 HRCP23327 699 aa11.25□□□□□ -0.61
NANOGP9-201ENST00000439890 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
NANOGP9-201ENST00000439890 WNT7AO00755 349 aa11.24□□□□□ -0.61
NANOGP9-201ENST00000439890 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
NANOGP9-201ENST00000439890 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
NANOGP9-201ENST00000439890 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
NANOGP9-201ENST00000439890 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
NANOGP9-201ENST00000439890 CFAP99D6REC4 459 aa11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 CTHP32929 405 aa11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 WNT7BP56706 349 aa11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 MYT1Q01538 1121 aa11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 POLR3EQ9NVU0 708 aa11.22□□□□□ -0.61
NANOGP9-201ENST00000439890 QPCTQ16769 361 aa11.21□□□□□ -0.61
NANOGP9-201ENST00000439890 RC3H1Q5TC82 1133 aaKnown RBP11.21□□□□□ -0.61
NANOGP9-201ENST00000439890 UNC93B1Q9H1C4 597 aa11.21□□□□□ -0.61
NANOGP9-201ENST00000439890 TOR4AQ9NXH8 423 aa11.21□□□□□ -0.61
NANOGP9-201ENST00000439890 SKOR1P84550 965 aa11.2□□□□□ -0.62
NANOGP9-201ENST00000439890 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
NANOGP9-201ENST00000439890 SNIP1Q8TAD8 396 aaKnown RBP11.2□□□□□ -0.62
NANOGP9-201ENST00000439890 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
NANOGP9-201ENST00000439890 EHBP1Q8NDI1 1231 aa11.19□□□□□ -0.62
NANOGP9-201ENST00000439890 EVA1BQ9NVM1 165 aa11.19□□□□□ -0.62
NANOGP9-201ENST00000439890 ST8SIA5O15466 376 aa11.18□□□□□ -0.62
NANOGP9-201ENST00000439890 DDRGK1Q96HY6 314 aa11.18□□□□□ -0.62
NANOGP9-201ENST00000439890 ZNF787Q6DD87 383 aa11.17□□□□□ -0.62
NANOGP9-201ENST00000439890 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
NANOGP9-201ENST00000439890 HELBQ8NG08 1087 aaPredicted RBP11.17□□□□□ -0.62
NANOGP9-201ENST00000439890 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
NANOGP9-201ENST00000439890 BAP1Q92560 729 aa11.15□□□□□ -0.62
NANOGP9-201ENST00000439890 FAM117AQ9C073 453 aa11.15□□□□□ -0.62
NANOGP9-201ENST00000439890 MAP10Q9P2G4 905 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms