RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 FMN2Q9NZ56 1722 aa20.33■□□□□ 0.85
PRAME-209ENST00000439106 SOCS7O14512 581 aa20.33■□□□□ 0.85
PRAME-209ENST00000439106 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
PRAME-209ENST00000439106 ABCC11Q96J66 1382 aa20.31■□□□□ 0.84
PRAME-209ENST00000439106 ORAI2Q96SN7 254 aa20.3■□□□□ 0.84
PRAME-209ENST00000439106 KDM2AQ9Y2K7 1162 aa20.3■□□□□ 0.84
PRAME-209ENST00000439106 ADGRB1O14514 1584 aa20.29■□□□□ 0.84
PRAME-209ENST00000439106 DCAF11Q8TEB1 546 aa20.28■□□□□ 0.84
PRAME-209ENST00000439106 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
PRAME-209ENST00000439106 NUTM2FA1L443 756 aa20.27■□□□□ 0.84
PRAME-209ENST00000439106 SPATA31A6Q5VVP1 1343 aa20.25■□□□□ 0.83
PRAME-209ENST00000439106 ARHGEF28Q8N1W1 1705 aaKnown RBP20.24■□□□□ 0.83
PRAME-209ENST00000439106 NUTM2BA6NNL0 878 aaPredicted RBP20.24■□□□□ 0.83
PRAME-209ENST00000439106 NUTM2EB1AL46 878 aaPredicted RBP20.24■□□□□ 0.83
PRAME-209ENST00000439106 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
PRAME-209ENST00000439106 POTEAQ6S8J7 498 aa20.24■□□□□ 0.83
PRAME-209ENST00000439106 NUTM2AQ8IVF1 878 aaPredicted RBP20.24■□□□□ 0.83
PRAME-209ENST00000439106 DLC1Q96QB1 1528 aa20.23■□□□□ 0.83
PRAME-209ENST00000439106 PNPLA6Q8IY17 1366 aa20.22■□□□□ 0.83
PRAME-209ENST00000439106 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
PRAME-209ENST00000439106 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
PRAME-209ENST00000439106 KIF1AQ12756 1690 aa20.21■□□□□ 0.83
PRAME-209ENST00000439106 USP32Q8NFA0 1604 aa20.2■□□□□ 0.82
PRAME-209ENST00000439106 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
PRAME-209ENST00000439106 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
PRAME-209ENST00000439106 PXDNQ92626 1479 aa20.19■□□□□ 0.82
PRAME-209ENST00000439106 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
PRAME-209ENST00000439106 TRAK1Q9UPV9 953 aa20.19■□□□□ 0.82
PRAME-209ENST00000439106 ADGRB2O60241 1585 aa20.19■□□□□ 0.82
PRAME-209ENST00000439106 KIAA1210Q9ULL0 1709 aa20.19■□□□□ 0.82
PRAME-209ENST00000439106 COL22A1Q8NFW1 1626 aaPredicted RBP20.18■□□□□ 0.82
PRAME-209ENST00000439106 SOS2Q07890 1332 aaPredicted RBP20.18■□□□□ 0.82
PRAME-209ENST00000439106 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
PRAME-209ENST00000439106 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
PRAME-209ENST00000439106 FOXO3O43524 673 aa20.15■□□□□ 0.82
PRAME-209ENST00000439106 POGKQ9P215 609 aa20.15■□□□□ 0.82
PRAME-209ENST00000439106 HIRIP3Q9BW71 556 aaPredicted RBP20.14■□□□□ 0.81
PRAME-209ENST00000439106 NPHP3Q7Z494 1330 aa20.13■□□□□ 0.81
PRAME-209ENST00000439106 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
PRAME-209ENST00000439106 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
PRAME-209ENST00000439106 ADAMTS2O95450 1211 aa20.1■□□□□ 0.81
PRAME-209ENST00000439106 STAC3Q96MF2 364 aa20.1■□□□□ 0.81
PRAME-209ENST00000439106 C8orf37Q96NL8 207 aa20.1■□□□□ 0.81
PRAME-209ENST00000439106 AFF2P51816 1311 aa20.09■□□□□ 0.81
PRAME-209ENST00000439106 ABCA3Q99758 1704 aa20.09■□□□□ 0.81
PRAME-209ENST00000439106 ITSN1Q15811 1721 aa20.08■□□□□ 0.81
PRAME-209ENST00000439106 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
PRAME-209ENST00000439106 TRPM1Q7Z4N2 1603 aa20.07■□□□□ 0.8
PRAME-209ENST00000439106 NBPF1Q3BBV0 1214 aa20.06■□□□□ 0.8
PRAME-209ENST00000439106 ZNF772Q68DY9 489 aaPredicted RBP20.06■□□□□ 0.8
PRAME-209ENST00000439106 TRPM3Q9HCF6 1732 aaPredicted RBP20.06■□□□□ 0.8
PRAME-209ENST00000439106 PHF8Q9UPP1 1060 aa20.06■□□□□ 0.8
PRAME-209ENST00000439106 ANKARQ7Z5J8 1434 aa20.05■□□□□ 0.8
PRAME-209ENST00000439106 NEUROD1Q13562 356 aa20.05■□□□□ 0.8
PRAME-209ENST00000439106 QRICH2Q9H0J4 1663 aa20.05■□□□□ 0.8
PRAME-209ENST00000439106 PRR36Q9H6K5 1346 aa20.04■□□□□ 0.8
PRAME-209ENST00000439106 PMFBP1Q8TBY8 1022 aa20.04■□□□□ 0.8
PRAME-209ENST00000439106 L3MBTL2Q969R5 705 aa20.04■□□□□ 0.8
PRAME-209ENST00000439106 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
PRAME-209ENST00000439106 KRT28Q7Z3Y7 464 aa20.03■□□□□ 0.8
PRAME-209ENST00000439106 TNS3Q68CZ2 1445 aa20.02■□□□□ 0.79
PRAME-209ENST00000439106 SPATA31A3Q5VYP0 1347 aa20.02■□□□□ 0.79
PRAME-209ENST00000439106 ALS2Q96Q42 1657 aa20.01■□□□□ 0.79
PRAME-209ENST00000439106 WASLO00401 505 aaPredicted RBP20.01■□□□□ 0.79
PRAME-209ENST00000439106 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
PRAME-209ENST00000439106 NGLY1Q96IV0 654 aa20.01■□□□□ 0.79
PRAME-209ENST00000439106 ATP7BP35670 1465 aa20■□□□□ 0.79
PRAME-209ENST00000439106 PLCH1Q4KWH8 1693 aa19.98■□□□□ 0.79
PRAME-209ENST00000439106 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
PRAME-209ENST00000439106 CRYBG1Q9Y4K1 1723 aa19.97■□□□□ 0.79
PRAME-209ENST00000439106 RXRBP28702 533 aa19.97■□□□□ 0.79
PRAME-209ENST00000439106 LMOD2Q6P5Q4 547 aa19.97■□□□□ 0.79
PRAME-209ENST00000439106 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.96■□□□□ 0.79
PRAME-209ENST00000439106 PSME1Q06323 249 aa19.96■□□□□ 0.79
PRAME-209ENST00000439106 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
PRAME-209ENST00000439106 CABLES1Q8TDN4 633 aa19.96■□□□□ 0.79
PRAME-209ENST00000439106 RGS12O14924 1447 aa19.95■□□□□ 0.78
PRAME-209ENST00000439106 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
PRAME-209ENST00000439106 USP21Q9UK80 565 aa19.94■□□□□ 0.78
PRAME-209ENST00000439106 SBNO1A3KN83 1393 aa19.94■□□□□ 0.78
PRAME-209ENST00000439106 CDK19Q9BWU1 502 aa19.93■□□□□ 0.78
PRAME-209ENST00000439106 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
PRAME-209ENST00000439106 NUDT16Q96DE0 195 aaKnown RBP19.92■□□□□ 0.78
PRAME-209ENST00000439106 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
PRAME-209ENST00000439106 CENPJQ9HC77 1338 aaPredicted RBP19.91■□□□□ 0.78
PRAME-209ENST00000439106 ATRNO75882 1429 aa19.91■□□□□ 0.78
PRAME-209ENST00000439106 HAP1P54257 671 aaPredicted RBP19.9■□□□□ 0.78
PRAME-209ENST00000439106 NBPF8Q3BBV2 869 aa19.9■□□□□ 0.78
PRAME-209ENST00000439106 FNBP4Q8N3X1 1017 aaPredicted RBP19.9■□□□□ 0.78
PRAME-209ENST00000439106 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
PRAME-209ENST00000439106 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
PRAME-209ENST00000439106 GPRASP1Q5JY77 1395 aa19.9■□□□□ 0.78
PRAME-209ENST00000439106 PHRF1Q9P1Y6 1649 aaKnown RBP19.9■□□□□ 0.78
PRAME-209ENST00000439106 NWD2Q9ULI1 1742 aa19.9■□□□□ 0.78
PRAME-209ENST00000439106 ROCK2O75116 1388 aaKnown RBP19.89■□□□□ 0.77
PRAME-209ENST00000439106 SLIT2O94813 1529 aa19.89■□□□□ 0.77
PRAME-209ENST00000439106 RBM6P78332 1123 aaKnown RBP19.89■□□□□ 0.77
PRAME-209ENST00000439106 NRAPQ86VF7 1730 aa19.88■□□□□ 0.77
PRAME-209ENST00000439106 GLI3P10071 1580 aa19.87■□□□□ 0.77
PRAME-209ENST00000439106 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms