RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 GPRASP1Q5JY77 1395 aa24.18■■□□□ 1.46
TARDBP-203ENST00000439080 ROBO1Q9Y6N7 1651 aa24.17■■□□□ 1.46
TARDBP-203ENST00000439080 FMN2Q9NZ56 1722 aa24.17■■□□□ 1.46
TARDBP-203ENST00000439080 TOM1O60784 492 aa24.16■■□□□ 1.46
TARDBP-203ENST00000439080 SIRT1Q96EB6 747 aa24.16■■□□□ 1.46
TARDBP-203ENST00000439080 PRAM1Q96QH2 718 aa24.16■■□□□ 1.46
TARDBP-203ENST00000439080 C19orf44Q9H6X5 657 aa24.16■■□□□ 1.46
TARDBP-203ENST00000439080 ATF3P18847 181 aa24.12■■□□□ 1.45
TARDBP-203ENST00000439080 MST1RQ04912 1400 aa24.12■■□□□ 1.45
TARDBP-203ENST00000439080 SAFB2Q14151 953 aaKnown RBP eCLIP24.12■■□□□ 1.45
TARDBP-203ENST00000439080 CADPS2Q86UW7 1296 aa24.12■■□□□ 1.45
TARDBP-203ENST00000439080 POGKQ9P215 609 aa24.12■■□□□ 1.45
TARDBP-203ENST00000439080 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
TARDBP-203ENST00000439080 PIP4K2BP78356 416 aa24.1■■□□□ 1.45
TARDBP-203ENST00000439080 RGPD8O14715 1765 aaPredicted RBP24.09■■□□□ 1.45
TARDBP-203ENST00000439080 EIF3AQ14152 1382 aaKnown RBP24.08■■□□□ 1.45
TARDBP-203ENST00000439080 CARD11Q9BXL7 1154 aa24.07■■□□□ 1.44
TARDBP-203ENST00000439080 USP32Q8NFA0 1604 aa24.06■■□□□ 1.44
TARDBP-203ENST00000439080 CENPJQ9HC77 1338 aaPredicted RBP24.05■■□□□ 1.44
TARDBP-203ENST00000439080 ILDR1Q86SU0 546 aaPredicted RBP24.04■■□□□ 1.44
TARDBP-203ENST00000439080 SLAIN2Q9P270 581 aa24.04■■□□□ 1.44
TARDBP-203ENST00000439080 NHSL1Q5SYE7 1610 aa24.04■■□□□ 1.44
TARDBP-203ENST00000439080 C1orf167Q5SNV9 1468 aa24.04■■□□□ 1.44
TARDBP-203ENST00000439080 MINK1Q8N4C8 1332 aaPredicted RBP24.04■■□□□ 1.44
TARDBP-203ENST00000439080 ITSN1Q15811 1721 aa24.03■■□□□ 1.44
TARDBP-203ENST00000439080 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
TARDBP-203ENST00000439080 TULP4Q9NRJ4 1543 aa24.02■■□□□ 1.44
TARDBP-203ENST00000439080 PHLPP1O60346 1717 aa24.02■■□□□ 1.44
TARDBP-203ENST00000439080 KIF1AQ12756 1690 aa24.01■■□□□ 1.43
TARDBP-203ENST00000439080 AHDC1Q5TGY3 1603 aaPredicted RBP23.99■■□□□ 1.43
TARDBP-203ENST00000439080 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
TARDBP-203ENST00000439080 ANKARQ7Z5J8 1434 aa23.97■■□□□ 1.43
TARDBP-203ENST00000439080 USP47Q96K76 1375 aa23.96■■□□□ 1.43
TARDBP-203ENST00000439080 NUTM2FA1L443 756 aa23.96■■□□□ 1.43
TARDBP-203ENST00000439080 ATP7BP35670 1465 aa23.96■■□□□ 1.43
TARDBP-203ENST00000439080 BRINP3Q76B58 766 aa23.95■■□□□ 1.42
TARDBP-203ENST00000439080 COL16A1Q07092 1604 aaPredicted RBP23.95■■□□□ 1.42
TARDBP-203ENST00000439080 WASLO00401 505 aaPredicted RBP23.94■■□□□ 1.42
TARDBP-203ENST00000439080 SBNO2Q9Y2G9 1366 aa23.94■■□□□ 1.42
TARDBP-203ENST00000439080 HSPA1LP34931 641 aa23.91■■□□□ 1.42
TARDBP-203ENST00000439080 ORAI2Q96SN7 254 aa23.91■■□□□ 1.42
TARDBP-203ENST00000439080 ESCO1Q5FWF5 840 aa23.89■■□□□ 1.41
TARDBP-203ENST00000439080 PRR36Q9H6K5 1346 aa23.89■■□□□ 1.41
TARDBP-203ENST00000439080 CDK19Q9BWU1 502 aa23.88■■□□□ 1.41
TARDBP-203ENST00000439080 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
TARDBP-203ENST00000439080 EVC2Q86UK5 1308 aa23.85■■□□□ 1.41
TARDBP-203ENST00000439080 SRPK2P78362 688 aaKnown RBP23.84■■□□□ 1.41
TARDBP-203ENST00000439080 SHPRHQ149N8 1683 aa23.84■■□□□ 1.41
TARDBP-203ENST00000439080 PXDNQ92626 1479 aa23.83■■□□□ 1.41
TARDBP-203ENST00000439080 DDX17Q92841 729 aaKnown RBP23.82■■□□□ 1.4
TARDBP-203ENST00000439080 NUDT16Q96DE0 195 aaKnown RBP23.82■■□□□ 1.4
TARDBP-203ENST00000439080 TESK2Q96S53 571 aa23.82■■□□□ 1.4
TARDBP-203ENST00000439080 CABP2Q9NPB3 220 aa23.82■■□□□ 1.4
TARDBP-203ENST00000439080 PHF8Q9UPP1 1060 aa23.81■■□□□ 1.4
TARDBP-203ENST00000439080 PPIP5K1Q6PFW1 1433 aa23.8■■□□□ 1.4
TARDBP-203ENST00000439080 TRPM3Q9HCF6 1732 aaPredicted RBP23.8■■□□□ 1.4
TARDBP-203ENST00000439080 NPHP3Q7Z494 1330 aa23.8■■□□□ 1.4
TARDBP-203ENST00000439080 AKAP12Q02952 1782 aa23.79■■□□□ 1.4
TARDBP-203ENST00000439080 PMFBP1Q8TBY8 1022 aa23.78■■□□□ 1.4
TARDBP-203ENST00000439080 FOXO3O43524 673 aa23.77■■□□□ 1.4
TARDBP-203ENST00000439080 ATAD2Q6PL18 1390 aa23.77■■□□□ 1.4
TARDBP-203ENST00000439080 DISP3Q9P2K9 1392 aa23.77■■□□□ 1.4
TARDBP-203ENST00000439080 SOS2Q07890 1332 aaPredicted RBP23.76■■□□□ 1.39
TARDBP-203ENST00000439080 EIF4G2P78344 907 aaKnown RBP eCLIP23.76■■□□□ 1.39
TARDBP-203ENST00000439080 CCDC61Q9Y6R9 512 aa23.76■■□□□ 1.39
TARDBP-203ENST00000439080 COL22A1Q8NFW1 1626 aaPredicted RBP23.74■■□□□ 1.39
TARDBP-203ENST00000439080 XPCQ01831 940 aaPredicted RBP23.74■■□□□ 1.39
TARDBP-203ENST00000439080 MYOM1P52179 1685 aa23.74■■□□□ 1.39
TARDBP-203ENST00000439080 ALS2Q96Q42 1657 aa23.74■■□□□ 1.39
TARDBP-203ENST00000439080 MON2Q7Z3U7 1717 aa23.73■■□□□ 1.39
TARDBP-203ENST00000439080 POLR3AO14802 1390 aaPredicted RBP23.73■■□□□ 1.39
TARDBP-203ENST00000439080 JCADQ9P266 1359 aa23.73■■□□□ 1.39
TARDBP-203ENST00000439080 HSPA5P11021 654 aaKnown RBP23.73■■□□□ 1.39
TARDBP-203ENST00000439080 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
TARDBP-203ENST00000439080 NRKQ7Z2Y5 1582 aa23.71■■□□□ 1.39
TARDBP-203ENST00000439080 TMF1P82094 1093 aa23.71■■□□□ 1.39
TARDBP-203ENST00000439080 TNS3Q68CZ2 1445 aa23.7■■□□□ 1.39
TARDBP-203ENST00000439080 NGDNQ8NEJ9 315 aaKnown RBP23.7■■□□□ 1.38
TARDBP-203ENST00000439080 ABCA3Q99758 1704 aa23.69■■□□□ 1.38
TARDBP-203ENST00000439080 PLEKHG3A1L390 1219 aa23.69■■□□□ 1.38
TARDBP-203ENST00000439080 KRT28Q7Z3Y7 464 aa23.68■■□□□ 1.38
TARDBP-203ENST00000439080 LRRC59Q96AG4 307 aaKnown RBP23.68■■□□□ 1.38
TARDBP-203ENST00000439080 ACEP12821 1306 aa23.68■■□□□ 1.38
TARDBP-203ENST00000439080 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
TARDBP-203ENST00000439080 MED1Q15648 1581 aaPredicted RBP23.68■■□□□ 1.38
TARDBP-203ENST00000439080 PSME1Q06323 249 aa23.67■■□□□ 1.38
TARDBP-203ENST00000439080 CABP1Q9NZU7 370 aa23.67■■□□□ 1.38
TARDBP-203ENST00000439080 SBNO1A3KN83 1393 aa23.67■■□□□ 1.38
TARDBP-203ENST00000439080 PUS7Q96PZ0 661 aaKnown RBP23.66■■□□□ 1.38
TARDBP-203ENST00000439080 CD163L1Q9NR16 1453 aa23.65■■□□□ 1.38
TARDBP-203ENST00000439080 CRYBG1Q9Y4K1 1723 aa23.65■■□□□ 1.38
TARDBP-203ENST00000439080 USP6P35125 1406 aa23.64■■□□□ 1.37
TARDBP-203ENST00000439080 NINLQ9Y2I6 1382 aa23.64■■□□□ 1.37
TARDBP-203ENST00000439080 SPATA31A3Q5VYP0 1347 aa23.64■■□□□ 1.37
TARDBP-203ENST00000439080 CDCA8Q53HL2 280 aa23.63■■□□□ 1.37
TARDBP-203ENST00000439080 MARF1Q9Y4F3 1742 aaKnown RBP23.62■■□□□ 1.37
TARDBP-203ENST00000439080 LRP6O75581 1613 aa23.62■■□□□ 1.37
TARDBP-203ENST00000439080 CPSF1Q10570 1443 aaKnown RBP23.62■■□□□ 1.37
TARDBP-203ENST00000439080 TMC1Q8TDI8 760 aa23.62■■□□□ 1.37
TARDBP-203ENST00000439080 PIK3C2AO00443 1686 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms