RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SNIP1Q8TAD8 396 aaKnown RBP7.14□□□□□ -1.27
HMGB1P12-201ENST00000438594 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P12-201ENST00000438594 TRIM32Q13049 653 aa7.13□□□□□ -1.27
HMGB1P12-201ENST00000438594 MSS51Q4VC12 460 aa7.13□□□□□ -1.27
HMGB1P12-201ENST00000438594 PHOX2BQ99453 314 aa7.13□□□□□ -1.27
HMGB1P12-201ENST00000438594 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P12-201ENST00000438594 J3QL48 77 aa7.12□□□□□ -1.27
HMGB1P12-201ENST00000438594 WNT7AO00755 349 aa7.12□□□□□ -1.27
HMGB1P12-201ENST00000438594 SMPD1P17405 629 aa7.12□□□□□ -1.27
HMGB1P12-201ENST00000438594 Q3C1V9 767 aa7.12□□□□□ -1.27
HMGB1P12-201ENST00000438594 ATP13A2Q9NQ11 1180 aa7.12□□□□□ -1.27
HMGB1P12-201ENST00000438594 GPR37O15354 613 aa7.11□□□□□ -1.27
HMGB1P12-201ENST00000438594 GPIHBP1Q8IV16 184 aa7.11□□□□□ -1.27
HMGB1P12-201ENST00000438594 MRGPRX2Q96LB1 330 aa7.11□□□□□ -1.27
HMGB1P12-201ENST00000438594 SNRPBP14678 240 aaKnown RBP7.1□□□□□ -1.27
HMGB1P12-201ENST00000438594 INSM1Q01101 510 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P12-201ENST00000438594 NFX1Q12986 1120 aaKnown RBP7.1□□□□□ -1.27
HMGB1P12-201ENST00000438594 USB1Q9BQ65 265 aaKnown RBP7.09□□□□□ -1.27
HMGB1P12-201ENST00000438594 SENP2Q9HC62 589 aa7.09□□□□□ -1.27
HMGB1P12-201ENST00000438594 STK17AQ9UEE5 414 aa7.09□□□□□ -1.27
HMGB1P12-201ENST00000438594 HPS1Q92902 700 aa7.08□□□□□ -1.28
HMGB1P12-201ENST00000438594 REPIN1Q9BWE0 567 aaKnown RBP7.08□□□□□ -1.28
HMGB1P12-201ENST00000438594 TERTO14746 1132 aaKnown RBP7.07□□□□□ -1.28
HMGB1P12-201ENST00000438594 KDM4AO75164 1064 aa7.07□□□□□ -1.28
HMGB1P12-201ENST00000438594 MMP16P51512 607 aa7.07□□□□□ -1.28
HMGB1P12-201ENST00000438594 CD46P15529 392 aa7.06□□□□□ -1.28
HMGB1P12-201ENST00000438594 RC3H1Q5TC82 1133 aaKnown RBP7.06□□□□□ -1.28
HMGB1P12-201ENST00000438594 TRIM47Q96LD4 638 aa7.06□□□□□ -1.28
HMGB1P12-201ENST00000438594 DXOO77932 396 aaKnown RBP7.05□□□□□ -1.28
HMGB1P12-201ENST00000438594 ALDH1A1P00352 501 aa7.05□□□□□ -1.28
HMGB1P12-201ENST00000438594 HLA-CQ95604 372 aa7.05□□□□□ -1.28
HMGB1P12-201ENST00000438594 WIPF1O43516 503 aa7.04□□□□□ -1.28
HMGB1P12-201ENST00000438594 MDM2Q00987 491 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P12-201ENST00000438594 KIFC2Q96AC6 838 aa7.04□□□□□ -1.28
HMGB1P12-201ENST00000438594 SKOR1P84550 965 aa7.03□□□□□ -1.28
HMGB1P12-201ENST00000438594 GUCA2AQ02747 115 aa7.03□□□□□ -1.28
HMGB1P12-201ENST00000438594 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
HMGB1P12-201ENST00000438594 WNT7BP56706 349 aa7.01□□□□□ -1.29
HMGB1P12-201ENST00000438594 USP46P62068 366 aa7.01□□□□□ -1.29
HMGB1P12-201ENST00000438594 SYMPKQ92797 1274 aaKnown RBP7.01□□□□□ -1.29
HMGB1P12-201ENST00000438594 WASF2Q9Y6W5 498 aa7.01□□□□□ -1.29
HMGB1P12-201ENST00000438594 HOXA2O43364 376 aa7□□□□□ -1.29
HMGB1P12-201ENST00000438594 BMP1P13497 986 aa7□□□□□ -1.29
HMGB1P12-201ENST00000438594 MAP2K5Q13163 448 aa7□□□□□ -1.29
HMGB1P12-201ENST00000438594 LCE2CQ5TA81 110 aa7□□□□□ -1.29
HMGB1P12-201ENST00000438594 EHBP1Q8NDI1 1231 aa7□□□□□ -1.29
HMGB1P12-201ENST00000438594 JUNDP17535 347 aa6.99□□□□□ -1.29
HMGB1P12-201ENST00000438594 NUTM1Q86Y26 1132 aa6.99□□□□□ -1.29
HMGB1P12-201ENST00000438594 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
HMGB1P12-201ENST00000438594 CAPN5O15484 640 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P12-201ENST00000438594 VEGFBP49765 207 aa6.98□□□□□ -1.29
HMGB1P12-201ENST00000438594 KRI1Q8N9T8 703 aaKnown RBP6.98□□□□□ -1.29
HMGB1P12-201ENST00000438594 NUDT12Q9BQG2 462 aa6.98□□□□□ -1.29
HMGB1P12-201ENST00000438594 TULP1O00294 542 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P12-201ENST00000438594 IRF6O14896 467 aa6.97□□□□□ -1.29
HMGB1P12-201ENST00000438594 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
HMGB1P12-201ENST00000438594 C6orf229H3BNL8 230 aa6.96□□□□□ -1.3
HMGB1P12-201ENST00000438594 HAP1P54257 671 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P12-201ENST00000438594 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
HMGB1P12-201ENST00000438594 PTCRAQ6ISU1 281 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P12-201ENST00000438594 GMPRP36959 345 aa6.95□□□□□ -1.3
HMGB1P12-201ENST00000438594 RETREG3Q86VR2 466 aa6.95□□□□□ -1.3
HMGB1P12-201ENST00000438594 PRKCSHP14314 528 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P12-201ENST00000438594 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
HMGB1P12-201ENST00000438594 TRIM46Q7Z4K8 759 aa6.94□□□□□ -1.3
HMGB1P12-201ENST00000438594 IRF7Q92985 503 aa6.94□□□□□ -1.3
HMGB1P12-201ENST00000438594 CCDC102AQ96A19 550 aa6.94□□□□□ -1.3
HMGB1P12-201ENST00000438594 MINK1Q8N4C8 1332 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P12-201ENST00000438594 MS4A1P11836 297 aa6.93□□□□□ -1.3
HMGB1P12-201ENST00000438594 CLCN1P35523 988 aa6.93□□□□□ -1.3
HMGB1P12-201ENST00000438594 ZSCAN1Q8NBB4 408 aa6.93□□□□□ -1.3
HMGB1P12-201ENST00000438594 GPCPD1Q9NPB8 672 aa6.93□□□□□ -1.3
HMGB1P12-201ENST00000438594 SIAH2O43255 324 aa6.92□□□□□ -1.3
HMGB1P12-201ENST00000438594 CCNYL3P0C7X3 344 aa6.92□□□□□ -1.3
HMGB1P12-201ENST00000438594 FDX1P10109 184 aa6.92□□□□□ -1.3
HMGB1P12-201ENST00000438594 SH3BP2P78314 561 aa6.92□□□□□ -1.3
HMGB1P12-201ENST00000438594 FAM217BQ9NTX9 383 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P12-201ENST00000438594 TLL2Q9Y6L7 1015 aa6.91□□□□□ -1.3
HMGB1P12-201ENST00000438594 BAP1Q92560 729 aa6.9□□□□□ -1.3
HMGB1P12-201ENST00000438594 ZFP42Q96MM3 310 aa6.9□□□□□ -1.3
HMGB1P12-201ENST00000438594 UNC93B1Q9H1C4 597 aa6.9□□□□□ -1.3
HMGB1P12-201ENST00000438594 PCDHGC3Q9UN70 934 aa6.89□□□□□ -1.31
HMGB1P12-201ENST00000438594 SCARF1Q14162 830 aa6.88□□□□□ -1.31
HMGB1P12-201ENST00000438594 ERBB4Q15303 1308 aa6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 PLEKHG3A1L390 1219 aa6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 H3BM21 787 aa6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 NDUFV2P19404 249 aa6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 NNTQ13423 1086 aa6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 PTPRNQ16849 979 aa6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 NPAS3Q8IXF0 933 aa6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 PURBQ96QR8 312 aaKnown RBP6.87□□□□□ -1.31
HMGB1P12-201ENST00000438594 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
HMGB1P12-201ENST00000438594 SSTR3P32745 418 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P12-201ENST00000438594 CTHP32929 405 aa6.86□□□□□ -1.31
HMGB1P12-201ENST00000438594 WDR4P57081 412 aaKnown RBP6.86□□□□□ -1.31
HMGB1P12-201ENST00000438594 MRPL14Q6P1L8 145 aaKnown RBP6.86□□□□□ -1.31
HMGB1P12-201ENST00000438594 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
HMGB1P12-201ENST00000438594 EVA1BQ9NVM1 165 aa6.86□□□□□ -1.31
HMGB1P12-201ENST00000438594 VARSP26640 1264 aaKnown RBP6.85□□□□□ -1.31
HMGB1P12-201ENST00000438594 KCNH2Q12809 1159 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms