RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
SGCE-205ENST00000437425 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
SGCE-205ENST00000437425 KNDC1Q76NI1 1749 aa20.73■□□□□ 0.91
SGCE-205ENST00000437425 TECPR2O15040 1411 aa20.73■□□□□ 0.91
SGCE-205ENST00000437425 FAM135BQ49AJ0 1406 aa20.73■□□□□ 0.91
SGCE-205ENST00000437425 CEBPAP49715 358 aaPredicted RBP20.73■□□□□ 0.91
SGCE-205ENST00000437425 USP32Q8NFA0 1604 aa20.72■□□□□ 0.91
SGCE-205ENST00000437425 ANKRD36BQ8N2N9 1353 aa20.71■□□□□ 0.91
SGCE-205ENST00000437425 TXNDC2Q86VQ3 553 aa20.68■□□□□ 0.9
SGCE-205ENST00000437425 NSD2O96028 1365 aa20.68■□□□□ 0.9
SGCE-205ENST00000437425 ADAMTSL3P82987 1691 aa20.68■□□□□ 0.9
SGCE-205ENST00000437425 CPS1P31327 1500 aa20.68■□□□□ 0.9
SGCE-205ENST00000437425 BCANQ96GW7 911 aa20.68■□□□□ 0.9
SGCE-205ENST00000437425 DIP2AQ14689 1571 aa20.67■□□□□ 0.9
SGCE-205ENST00000437425 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
SGCE-205ENST00000437425 CARD14Q9BXL6 1004 aa20.67■□□□□ 0.9
SGCE-205ENST00000437425 ADAMTS13Q76LX8 1427 aa20.66■□□□□ 0.9
SGCE-205ENST00000437425 METP08581 1390 aa20.66■□□□□ 0.9
SGCE-205ENST00000437425 SLC12A5Q9H2X9 1139 aa20.66■□□□□ 0.9
SGCE-205ENST00000437425 RIMS1Q86UR5 1692 aaKnown RBP20.66■□□□□ 0.9
SGCE-205ENST00000437425 MED14O60244 1454 aa20.65■□□□□ 0.9
SGCE-205ENST00000437425 CGNL1Q0VF96 1302 aa20.65■□□□□ 0.9
SGCE-205ENST00000437425 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
SGCE-205ENST00000437425 TERF2IPQ9NYB0 399 aa20.65■□□□□ 0.9
SGCE-205ENST00000437425 NSD3Q9BZ95 1437 aa20.65■□□□□ 0.9
SGCE-205ENST00000437425 MINK1Q8N4C8 1332 aaPredicted RBP20.64■□□□□ 0.9
SGCE-205ENST00000437425 SAFB2Q14151 953 aaKnown RBP eCLIP20.64■□□□□ 0.9
SGCE-205ENST00000437425 CEP170BQ9Y4F5 1589 aaPredicted RBP20.64■□□□□ 0.89
SGCE-205ENST00000437425 LTKP29376 864 aa20.63■□□□□ 0.89
SGCE-205ENST00000437425 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
SGCE-205ENST00000437425 TBX22Q9Y458 520 aa20.63■□□□□ 0.89
SGCE-205ENST00000437425 CDK19Q9BWU1 502 aa20.62■□□□□ 0.89
SGCE-205ENST00000437425 ZNF142P52746 1687 aaPredicted RBP20.6■□□□□ 0.89
SGCE-205ENST00000437425 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
SGCE-205ENST00000437425 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
SGCE-205ENST00000437425 SETD1BQ9UPS6 1966 aaKnown RBP20.59■□□□□ 0.89
SGCE-205ENST00000437425 PIK3R4Q99570 1358 aa20.58■□□□□ 0.89
SGCE-205ENST00000437425 ATP7BP35670 1465 aa20.58■□□□□ 0.89
SGCE-205ENST00000437425 WAPLQ7Z5K2 1190 aa20.58■□□□□ 0.88
SGCE-205ENST00000437425 WASLO00401 505 aaPredicted RBP20.57■□□□□ 0.88
SGCE-205ENST00000437425 MORC1Q86VD1 984 aa20.57■□□□□ 0.88
SGCE-205ENST00000437425 BLMP54132 1417 aaPredicted RBP20.56■□□□□ 0.88
SGCE-205ENST00000437425 ADGRB2O60241 1585 aa20.55■□□□□ 0.88
SGCE-205ENST00000437425 A0A1W2PP64 1363 aa20.55■□□□□ 0.88
SGCE-205ENST00000437425 PLEKHH1Q9ULM0 1364 aa20.55■□□□□ 0.88
SGCE-205ENST00000437425 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
SGCE-205ENST00000437425 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
SGCE-205ENST00000437425 NEFLP07196 543 aa20.54■□□□□ 0.88
SGCE-205ENST00000437425 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
SGCE-205ENST00000437425 POLR3AO14802 1390 aaPredicted RBP20.54■□□□□ 0.88
SGCE-205ENST00000437425 ANKLE2Q86XL3 938 aa20.53■□□□□ 0.88
SGCE-205ENST00000437425 PDE3BQ13370 1112 aa20.52■□□□□ 0.87
SGCE-205ENST00000437425 CD163L1Q9NR16 1453 aa20.51■□□□□ 0.87
SGCE-205ENST00000437425 ROBO2Q9HCK4 1378 aa20.51■□□□□ 0.87
SGCE-205ENST00000437425 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
SGCE-205ENST00000437425 CABP1Q9NZU7 370 aa20.49■□□□□ 0.87
SGCE-205ENST00000437425 CCDC61Q9Y6R9 512 aa20.49■□□□□ 0.87
SGCE-205ENST00000437425 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
SGCE-205ENST00000437425 SLC26A8Q96RN1 970 aa20.48■□□□□ 0.87
SGCE-205ENST00000437425 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
SGCE-205ENST00000437425 AMOTL2Q9Y2J4 779 aa20.48■□□□□ 0.87
SGCE-205ENST00000437425 PTPRUQ92729 1446 aa20.47■□□□□ 0.87
SGCE-205ENST00000437425 ANKRD26Q9UPS8 1709 aa20.47■□□□□ 0.87
SGCE-205ENST00000437425 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
SGCE-205ENST00000437425 PPIP5K1Q6PFW1 1433 aa20.46■□□□□ 0.87
SGCE-205ENST00000437425 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
SGCE-205ENST00000437425 ADAMTS8Q9UP79 889 aa20.46■□□□□ 0.87
SGCE-205ENST00000437425 XRN1Q8IZH2 1706 aaKnown RBP20.45■□□□□ 0.86
SGCE-205ENST00000437425 CPSF1Q10570 1443 aaKnown RBP20.45■□□□□ 0.86
SGCE-205ENST00000437425 EDC4Q6P2E9 1401 aaKnown RBP20.45■□□□□ 0.86
SGCE-205ENST00000437425 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
SGCE-205ENST00000437425 CDC42BPGQ6DT37 1551 aa20.44■□□□□ 0.86
SGCE-205ENST00000437425 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
SGCE-205ENST00000437425 FYB1O15117 783 aa20.42■□□□□ 0.86
SGCE-205ENST00000437425 ERICH6BQ5W0A0 696 aa20.42■□□□□ 0.86
SGCE-205ENST00000437425 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
SGCE-205ENST00000437425 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
SGCE-205ENST00000437425 PLEKHG3A1L390 1219 aa20.38■□□□□ 0.85
SGCE-205ENST00000437425 MTHFSP49914 203 aa20.38■□□□□ 0.85
SGCE-205ENST00000437425 TOPAZ1Q8N9V7 1692 aa20.38■□□□□ 0.85
SGCE-205ENST00000437425 FBXO41Q8TF61 875 aa20.37■□□□□ 0.85
SGCE-205ENST00000437425 ITSN1Q15811 1721 aa20.37■□□□□ 0.85
SGCE-205ENST00000437425 MON2Q7Z3U7 1717 aa20.37■□□□□ 0.85
SGCE-205ENST00000437425 AKAP12Q02952 1782 aa20.36■□□□□ 0.85
SGCE-205ENST00000437425 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
SGCE-205ENST00000437425 FKBP8Q14318 412 aa20.36■□□□□ 0.85
SGCE-205ENST00000437425 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
SGCE-205ENST00000437425 NPHP4O75161 1426 aaPredicted RBP20.35■□□□□ 0.85
SGCE-205ENST00000437425 CHD2O14647 1828 aaKnown RBP20.35■□□□□ 0.85
SGCE-205ENST00000437425 NCBP3Q53F19 620 aaKnown RBP20.35■□□□□ 0.85
SGCE-205ENST00000437425 TNNT2P45379 298 aaPredicted RBP20.34■□□□□ 0.85
SGCE-205ENST00000437425 PRR36Q9H6K5 1346 aa20.34■□□□□ 0.85
SGCE-205ENST00000437425 SHPRHQ149N8 1683 aa20.33■□□□□ 0.84
SGCE-205ENST00000437425 KCNA6P17658 529 aa20.32■□□□□ 0.84
SGCE-205ENST00000437425 PELP1Q8IZL8 1130 aaKnown RBP20.32■□□□□ 0.84
SGCE-205ENST00000437425 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
SGCE-205ENST00000437425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.3■□□□□ 0.847e-6■■□□□ 11.5
SGCE-205ENST00000437425 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
SGCE-205ENST00000437425 PNPLA6Q8IY17 1366 aa20.3■□□□□ 0.84
SGCE-205ENST00000437425 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms