RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 TRMT2AQ8IZ69 625 aaKnown RBP8.68□□□□□ -1.02
SEMA3A-204ENST00000436949 PPP6R1Q9UPN7 881 aa8.68□□□□□ -1.02
SEMA3A-204ENST00000436949 RRP7AQ9Y3A4 280 aaKnown RBP8.68□□□□□ -1.02
SEMA3A-204ENST00000436949 MLECQ14165 292 aa8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 CARD14Q9BXL6 1004 aa8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 TNNQ9UQP3 1299 aa8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 UNC13BO14795 1591 aa8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 USP19O94966 1318 aa8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 AFAP1Q8N556 730 aa8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 CFAP70Q5T0N1 1121 aa8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 SLKQ9H2G2 1235 aaPredicted RBP8.67□□□□□ -1.02
SEMA3A-204ENST00000436949 A2ML1A8K2U0 1454 aa8.66□□□□□ -1.02
SEMA3A-204ENST00000436949 CEBPAP49715 358 aaPredicted RBP8.66□□□□□ -1.02
SEMA3A-204ENST00000436949 BCL2L13Q9BXK5 485 aa8.66□□□□□ -1.02
SEMA3A-204ENST00000436949 SYNMO15061 1565 aa8.66□□□□□ -1.02
SEMA3A-204ENST00000436949 LAMC1P11047 1609 aa8.66□□□□□ -1.02
SEMA3A-204ENST00000436949 CANXP27824 592 aaKnown RBP8.66□□□□□ -1.02
SEMA3A-204ENST00000436949 DEPDC5O75140 1603 aa8.65□□□□□ -1.02
SEMA3A-204ENST00000436949 IQGAP3Q86VI3 1631 aa8.65□□□□□ -1.02
SEMA3A-204ENST00000436949 EIF2AK4Q9P2K8 1649 aaKnown RBP8.65□□□□□ -1.02
SEMA3A-204ENST00000436949 UBAP1LF5GYI3 381 aa8.65□□□□□ -1.02
SEMA3A-204ENST00000436949 NKTRP30414 1462 aaKnown RBP8.65□□□□□ -1.02
SEMA3A-204ENST00000436949 ASXL1Q8IXJ9 1541 aa8.65□□□□□ -1.03
SEMA3A-204ENST00000436949 E9PSI1 815 aa8.65□□□□□ -1.03
SEMA3A-204ENST00000436949 POGKQ9P215 609 aa8.65□□□□□ -1.03
SEMA3A-204ENST00000436949 INO80Q9ULG1 1556 aaPredicted RBP8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 CDCA8Q53HL2 280 aa8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 WWC1Q8IX03 1113 aa8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 ESF1Q9H501 851 aaKnown RBP8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 RLBP1P12271 317 aa8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 SPRYD3Q8NCJ5 442 aa8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 ARXQ96QS3 562 aa8.64□□□□□ -1.03
SEMA3A-204ENST00000436949 PIK3C2GO75747 1445 aa8.63□□□□□ -1.03
SEMA3A-204ENST00000436949 CENPJQ9HC77 1338 aaPredicted RBP8.63□□□□□ -1.03
SEMA3A-204ENST00000436949 EIF3AQ14152 1382 aaKnown RBP8.63□□□□□ -1.03
SEMA3A-204ENST00000436949 NEURL4Q96JN8 1562 aa8.63□□□□□ -1.03
SEMA3A-204ENST00000436949 ADGRF5Q8IZF2 1346 aa8.63□□□□□ -1.03
SEMA3A-204ENST00000436949 DUOX2Q9NRD8 1548 aa8.63□□□□□ -1.03
SEMA3A-204ENST00000436949 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
SEMA3A-204ENST00000436949 RNF17Q9BXT8 1623 aaKnown RBP8.62□□□□□ -1.03
SEMA3A-204ENST00000436949 MED14O60244 1454 aa8.62□□□□□ -1.03
SEMA3A-204ENST00000436949 ZMYM3Q14202 1370 aa8.62□□□□□ -1.03
SEMA3A-204ENST00000436949 MAST1Q9Y2H9 1570 aa8.62□□□□□ -1.03
SEMA3A-204ENST00000436949 CLTCQ00610 1675 aaKnown RBP8.62□□□□□ -1.03
SEMA3A-204ENST00000436949 VWDEQ8N2E2 1590 aa8.62□□□□□ -1.03
SEMA3A-204ENST00000436949 EIF5BO60841 1220 aaKnown RBP8.62□□□□□ -1.03
SEMA3A-204ENST00000436949 SPAG9O60271 1321 aaKnown RBP8.61□□□□□ -1.03
SEMA3A-204ENST00000436949 ALKQ9UM73 1620 aa8.61□□□□□ -1.03
SEMA3A-204ENST00000436949 TOM1O60784 492 aa8.61□□□□□ -1.03
SEMA3A-204ENST00000436949 ZNF335Q9H4Z2 1342 aaPredicted RBP8.61□□□□□ -1.03
SEMA3A-204ENST00000436949 ATP7AQ04656 1500 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 IQGAP1P46940 1657 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 KIF3BO15066 747 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 RARSP54136 660 aaKnown RBP8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 PDE3AQ14432 1141 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 SLC12A5Q9H2X9 1139 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 CGNL1Q0VF96 1302 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 MYOM1P52179 1685 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
SEMA3A-204ENST00000436949 UGGT1Q9NYU2 1555 aa8.59□□□□□ -1.03
SEMA3A-204ENST00000436949 CHGAP10645 457 aaKnown RBP8.59□□□□□ -1.03
SEMA3A-204ENST00000436949 MORC1Q86VD1 984 aa8.59□□□□□ -1.03
SEMA3A-204ENST00000436949 PDZRN3Q9UPQ7 1066 aa8.59□□□□□ -1.03
SEMA3A-204ENST00000436949 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
SEMA3A-204ENST00000436949 ERVK-7P63135 1459 aa8.59□□□□□ -1.03
SEMA3A-204ENST00000436949 CLTCL1P53675 1640 aa8.59□□□□□ -1.03
SEMA3A-204ENST00000436949 NLRP1Q9C000 1473 aa8.58□□□□□ -1.04
SEMA3A-204ENST00000436949 NPC1L1Q9UHC9 1359 aa8.58□□□□□ -1.04
SEMA3A-204ENST00000436949 NCKAP5LQ9HCH0 1330 aa8.58□□□□□ -1.04
SEMA3A-204ENST00000436949 HSPA1LP34931 641 aa8.58□□□□□ -1.04
SEMA3A-204ENST00000436949 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
SEMA3A-204ENST00000436949 TBC1D2Q9BYX2 928 aa8.58□□□□□ -1.04
SEMA3A-204ENST00000436949 MAPK8IP3Q9UPT6 1336 aa8.57□□□□□ -1.04
SEMA3A-204ENST00000436949 MTHFSP49914 203 aa8.57□□□□□ -1.04
SEMA3A-204ENST00000436949 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
SEMA3A-204ENST00000436949 NUTM2DQ5VT03 806 aaPredicted RBP8.57□□□□□ -1.04
SEMA3A-204ENST00000436949 GZF1Q9H116 711 aaPredicted RBP8.57□□□□□ -1.04
SEMA3A-204ENST00000436949 TRPM2O94759 1503 aa8.57□□□□□ -1.04
SEMA3A-204ENST00000436949 BECN1Q14457 450 aa8.56□□□□□ -1.04
SEMA3A-204ENST00000436949 RTEL1-TNFRSF6BF6WH68 1400 aa8.56□□□□□ -1.04
SEMA3A-204ENST00000436949 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
SEMA3A-204ENST00000436949 TSR2Q969E8 191 aaKnown RBP8.56□□□□□ -1.04
SEMA3A-204ENST00000436949 RUNDC1Q96C34 613 aa8.56□□□□□ -1.04
SEMA3A-204ENST00000436949 TBC1D32Q96NH3 1257 aa8.55□□□□□ -1.04
SEMA3A-204ENST00000436949 SPHKAPQ2M3C7 1700 aa8.55□□□□□ -1.04
SEMA3A-204ENST00000436949 POLR3AO14802 1390 aaPredicted RBP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 KDM5AP29375 1690 aaKnown RBP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 MFAP1P55081 439 aaKnown RBP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 PMFBP1Q8TBY8 1022 aa8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 RRAGDQ9NQL2 400 aaPredicted RBP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 U2AF1L5P0DN76 240 aaPredicted RBP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 U2AF1Q01081 240 aaKnown RBP eCLIP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 SAFB2Q14151 953 aaKnown RBP eCLIP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 UPF2Q9HAU5 1272 aaKnown RBP8.54□□□□□ -1.04
SEMA3A-204ENST00000436949 CEP152O94986 1710 aa8.53□□□□□ -1.04
SEMA3A-204ENST00000436949 ZC3H13Q5T200 1668 aaKnown RBP8.53□□□□□ -1.04
SEMA3A-204ENST00000436949 NPHP4O75161 1426 aaPredicted RBP8.53□□□□□ -1.04
SEMA3A-204ENST00000436949 FAM43AQ8N2R8 423 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms