RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
VPS8-207ENST00000436792 TEX13AQ9BXU3 409 aaPredicted RBP11.16□□□□□ -0.62
VPS8-207ENST00000436792 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 XBP1P17861 261 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 MTHFSP49914 203 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 ST5P78524 1137 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 SF3A1Q15459 793 aaKnown RBP11.16□□□□□ -0.62
VPS8-207ENST00000436792 BRMS1Q9HCU9 246 aa11.16□□□□□ -0.62
VPS8-207ENST00000436792 ATF7IPQ6VMQ6 1270 aa11.15□□□□□ -0.62
VPS8-207ENST00000436792 DIAPH3Q9NSV4 1193 aa11.15□□□□□ -0.62
VPS8-207ENST00000436792 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.62
VPS8-207ENST00000436792 KIF16BQ96L93 1317 aa11.15□□□□□ -0.62
VPS8-207ENST00000436792 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.62
VPS8-207ENST00000436792 NBR1Q14596 966 aa11.15□□□□□ -0.62
VPS8-207ENST00000436792 JDP2Q8WYK2 163 aa11.15□□□□□ -0.62
VPS8-207ENST00000436792 RFC4P35249 363 aa11.15□□□□□ -0.63
VPS8-207ENST00000436792 GRM1Q13255 1194 aa11.15□□□□□ -0.63
VPS8-207ENST00000436792 ZNF772Q68DY9 489 aaPredicted RBP11.15□□□□□ -0.63
VPS8-207ENST00000436792 CDK19Q9BWU1 502 aa11.15□□□□□ -0.63
VPS8-207ENST00000436792 PPP4R2Q9NY27 417 aa11.15□□□□□ -0.63
VPS8-207ENST00000436792 RTEL1-TNFRSF6BF6WH68 1400 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 CPLX1O14810 134 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 ZC3H6P61129 1189 aaKnown RBP11.14□□□□□ -0.63
VPS8-207ENST00000436792 GPR162Q16538 588 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 ZNF287Q9HBT7 754 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 SLC4A3P48751 1232 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 AIMP1Q12904 312 aaKnown RBP11.14□□□□□ -0.63
VPS8-207ENST00000436792 HDAC9Q9UKV0 1011 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 RNF20Q5VTR2 975 aa11.14□□□□□ -0.63
VPS8-207ENST00000436792 ERC2O15083 957 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 NFXL1Q6ZNB6 911 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 PLIN1O60240 522 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 SAFBQ15424 915 aaKnown RBP eCLIP11.13□□□□□ -0.63
VPS8-207ENST00000436792 RALYLQ86SE5 291 aaKnown RBP11.13□□□□□ -0.63
VPS8-207ENST00000436792 IGF1RP08069 1367 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 HSPA5P11021 654 aaKnown RBP11.13□□□□□ -0.63
VPS8-207ENST00000436792 RGS3P49796 1198 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 IL27Q8NEV9 243 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 NEUROD6Q96NK8 337 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 PRAM1Q96QH2 718 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
VPS8-207ENST00000436792 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
VPS8-207ENST00000436792 LAMC3Q9Y6N6 1575 aa11.12□□□□□ -0.63
VPS8-207ENST00000436792 BICDL1Q6ZP65 573 aa11.12□□□□□ -0.63
VPS8-207ENST00000436792 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
VPS8-207ENST00000436792 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
VPS8-207ENST00000436792 ZKSCAN1P17029 563 aaPredicted RBP11.12□□□□□ -0.63
VPS8-207ENST00000436792 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
VPS8-207ENST00000436792 CCDC30Q5VVM6 783 aa11.12□□□□□ -0.63
VPS8-207ENST00000436792 FYB1O15117 783 aa11.12□□□□□ -0.63
VPS8-207ENST00000436792 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
VPS8-207ENST00000436792 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
VPS8-207ENST00000436792 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.11□□□□□ -0.632e-6■■■■□ 21.9
VPS8-207ENST00000436792 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
VPS8-207ENST00000436792 RFX1P22670 979 aa11.11□□□□□ -0.63
VPS8-207ENST00000436792 WDR78Q5VTH9 848 aa11.11□□□□□ -0.63
VPS8-207ENST00000436792 ZNF622Q969S3 477 aaKnown RBP eCLIP11.11□□□□□ -0.634e-6■■■□□ 14.6
VPS8-207ENST00000436792 NACAP1Q9BZK3 213 aa11.11□□□□□ -0.63
VPS8-207ENST00000436792 TPD52L1Q16890 204 aaPredicted RBP11.11□□□□□ -0.63
VPS8-207ENST00000436792 WASHC4Q2M389 1173 aa11.11□□□□□ -0.63
VPS8-207ENST00000436792 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
VPS8-207ENST00000436792 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.11□□□□□ -0.634e-8■■■■■ 152.9
VPS8-207ENST00000436792 BIN2Q9UBW5 565 aaPredicted RBP11.11□□□□□ -0.63
VPS8-207ENST00000436792 ANKRD30BQ9BXX2 1392 aa11.11□□□□□ -0.63
VPS8-207ENST00000436792 CCDC158Q5M9N0 1113 aa11.1□□□□□ -0.63
VPS8-207ENST00000436792 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
VPS8-207ENST00000436792 ANKRD50Q9ULJ7 1429 aa11.1□□□□□ -0.63
VPS8-207ENST00000436792 TNRQ92752 1358 aa11.1□□□□□ -0.63
VPS8-207ENST00000436792 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
VPS8-207ENST00000436792 UHRF1BP1Q6BDS2 1440 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 AMOTQ4VCS5 1084 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 AIDAQ96BJ3 306 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 AMOTL2Q9Y2J4 779 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 CFTRP13569 1480 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 NCOA2Q15596 1464 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 ZSCAN25Q6NSZ9 544 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 PTMSP20962 102 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 CCDC57Q2TAC2 916 aa11.09□□□□□ -0.63
VPS8-207ENST00000436792 CUX1P39880 1505 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 ATAD2Q6PL18 1390 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
VPS8-207ENST00000436792 OGFOD1Q8N543 542 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 HOOK1Q9UJC3 728 aaKnown RBP11.08□□□□□ -0.64
VPS8-207ENST00000436792 KIAA0586Q9BVV6 1533 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 H3BQV1 296 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
VPS8-207ENST00000436792 ODF2Q5BJF6 829 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 NESP48681 1621 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 B4DLN1 442 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 TPM3P06753 285 aa11.08□□□□□ -0.64
VPS8-207ENST00000436792 MRPL12P52815 198 aaKnown RBP11.08□□□□□ -0.64
VPS8-207ENST00000436792 XPCQ01831 940 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms