RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
RPE-207ENST00000435437 CADPS2Q86UW7 1296 aa13.05□□□□□ -0.32
RPE-207ENST00000435437 DDX17Q92841 729 aaKnown RBP13.05□□□□□ -0.32
RPE-207ENST00000435437 CDC42BPGQ6DT37 1551 aa13.05□□□□□ -0.32
RPE-207ENST00000435437 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
RPE-207ENST00000435437 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
RPE-207ENST00000435437 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
RPE-207ENST00000435437 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
RPE-207ENST00000435437 ATF3P18847 181 aa13.02□□□□□ -0.33
RPE-207ENST00000435437 STK26Q9P289 416 aa13.02□□□□□ -0.33
RPE-207ENST00000435437 USP32Q8NFA0 1604 aa13.02□□□□□ -0.33
RPE-207ENST00000435437 ORAI2Q96SN7 254 aa13.01□□□□□ -0.33
RPE-207ENST00000435437 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
RPE-207ENST00000435437 ARHGEF28Q8N1W1 1705 aaKnown RBP13□□□□□ -0.33
RPE-207ENST00000435437 JCADQ9P266 1359 aa12.99□□□□□ -0.33
RPE-207ENST00000435437 DCAF11Q8TEB1 546 aa12.98□□□□□ -0.33
RPE-207ENST00000435437 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
RPE-207ENST00000435437 KDM2AQ9Y2K7 1162 aa12.98□□□□□ -0.33
RPE-207ENST00000435437 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
RPE-207ENST00000435437 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
RPE-207ENST00000435437 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
RPE-207ENST00000435437 PXDNQ92626 1479 aa12.97□□□□□ -0.33
RPE-207ENST00000435437 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
RPE-207ENST00000435437 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
RPE-207ENST00000435437 POTEAQ6S8J7 498 aa12.95□□□□□ -0.34
RPE-207ENST00000435437 PRAM1Q96QH2 718 aa12.94□□□□□ -0.34
RPE-207ENST00000435437 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
RPE-207ENST00000435437 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
RPE-207ENST00000435437 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
RPE-207ENST00000435437 PRR36Q9H6K5 1346 aa12.92□□□□□ -0.34
RPE-207ENST00000435437 TRAK1Q9UPV9 953 aa12.92□□□□□ -0.34
RPE-207ENST00000435437 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
RPE-207ENST00000435437 SOCS7O14512 581 aa12.91□□□□□ -0.34
RPE-207ENST00000435437 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
RPE-207ENST00000435437 L3MBTL2Q969R5 705 aa12.91□□□□□ -0.34
RPE-207ENST00000435437 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
RPE-207ENST00000435437 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
RPE-207ENST00000435437 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
RPE-207ENST00000435437 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
RPE-207ENST00000435437 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
RPE-207ENST00000435437 FOXO3O43524 673 aa12.88□□□□□ -0.35
RPE-207ENST00000435437 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
RPE-207ENST00000435437 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
RPE-207ENST00000435437 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
RPE-207ENST00000435437 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
RPE-207ENST00000435437 NBPF8Q3BBV2 869 aa12.87□□□□□ -0.35
RPE-207ENST00000435437 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
RPE-207ENST00000435437 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
RPE-207ENST00000435437 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
RPE-207ENST00000435437 MINK1Q8N4C8 1332 aaPredicted RBP12.87□□□□□ -0.35
RPE-207ENST00000435437 ATP7BP35670 1465 aa12.86□□□□□ -0.35
RPE-207ENST00000435437 CRYBG1Q9Y4K1 1723 aa12.86□□□□□ -0.35
RPE-207ENST00000435437 TRIM26Q12899 539 aaPredicted RBP12.86□□□□□ -0.35
RPE-207ENST00000435437 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
RPE-207ENST00000435437 ALS2Q96Q42 1657 aa12.86□□□□□ -0.35
RPE-207ENST00000435437 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
RPE-207ENST00000435437 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
RPE-207ENST00000435437 NUTM2AQ8IVF1 878 aaPredicted RBP12.85□□□□□ -0.35
RPE-207ENST00000435437 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.35
RPE-207ENST00000435437 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
RPE-207ENST00000435437 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
RPE-207ENST00000435437 SPATA31A3Q5VYP0 1347 aa12.83□□□□□ -0.36
RPE-207ENST00000435437 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.36
RPE-207ENST00000435437 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
RPE-207ENST00000435437 POGKQ9P215 609 aa12.82□□□□□ -0.36
RPE-207ENST00000435437 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
RPE-207ENST00000435437 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
RPE-207ENST00000435437 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
RPE-207ENST00000435437 AFF2P51816 1311 aa12.81□□□□□ -0.36
RPE-207ENST00000435437 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
RPE-207ENST00000435437 GPRASP1Q5JY77 1395 aa12.8□□□□□ -0.36
RPE-207ENST00000435437 TNS3Q68CZ2 1445 aa12.79□□□□□ -0.36
RPE-207ENST00000435437 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
RPE-207ENST00000435437 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
RPE-207ENST00000435437 ADAMTS2O95450 1211 aa12.78□□□□□ -0.36
RPE-207ENST00000435437 NUDT16Q96DE0 195 aaKnown RBP12.77□□□□□ -0.37
RPE-207ENST00000435437 C8orf37Q96NL8 207 aa12.77□□□□□ -0.37
RPE-207ENST00000435437 CDK19Q9BWU1 502 aa12.77□□□□□ -0.37
RPE-207ENST00000435437 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.76□□□□□ -0.37
RPE-207ENST00000435437 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
RPE-207ENST00000435437 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
RPE-207ENST00000435437 CABLES1Q8TDN4 633 aa12.76□□□□□ -0.37
RPE-207ENST00000435437 RALGAPBQ86X10 1494 aa12.76□□□□□ -0.37
RPE-207ENST00000435437 SLIT2O94813 1529 aa12.76□□□□□ -0.37
RPE-207ENST00000435437 PLCH1Q4KWH8 1693 aa12.76□□□□□ -0.37
RPE-207ENST00000435437 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
RPE-207ENST00000435437 RGS12O14924 1447 aa12.75□□□□□ -0.37
RPE-207ENST00000435437 ATRNO75882 1429 aa12.75□□□□□ -0.37
RPE-207ENST00000435437 NRAPQ86VF7 1730 aa12.75□□□□□ -0.37
RPE-207ENST00000435437 PHRF1Q9P1Y6 1649 aaKnown RBP12.75□□□□□ -0.37
RPE-207ENST00000435437 GLI3P10071 1580 aa12.74□□□□□ -0.37
RPE-207ENST00000435437 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
RPE-207ENST00000435437 CDK12Q9NYV4 1490 aaPredicted RBP12.73□□□□□ -0.37
RPE-207ENST00000435437 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
RPE-207ENST00000435437 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
RPE-207ENST00000435437 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
RPE-207ENST00000435437 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
RPE-207ENST00000435437 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
RPE-207ENST00000435437 SSH2Q76I76 1423 aa12.71□□□□□ -0.37
RPE-207ENST00000435437 AKAP12Q02952 1782 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms