RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 DCAF11Q8TEB1 546 aa29.57■■■□□ 2.32
LMBR1-208ENST00000434278 ORAI2Q96SN7 254 aa29.57■■■□□ 2.32
LMBR1-208ENST00000434278 KDM2AQ9Y2K7 1162 aa29.57■■■□□ 2.32
LMBR1-208ENST00000434278 SHPRHQ149N8 1683 aa29.56■■■□□ 2.32
LMBR1-208ENST00000434278 DHX57Q6P158 1386 aaKnown RBP29.55■■■□□ 2.32
LMBR1-208ENST00000434278 SPATA31A6Q5VVP1 1343 aa29.53■■■□□ 2.32
LMBR1-208ENST00000434278 SIRT1Q96EB6 747 aa29.53■■■□□ 2.32
LMBR1-208ENST00000434278 LRP6O75581 1613 aa29.53■■■□□ 2.32
LMBR1-208ENST00000434278 ADGRB1O14514 1584 aa29.51■■■□□ 2.31
LMBR1-208ENST00000434278 LRRC59Q96AG4 307 aaKnown RBP29.49■■■□□ 2.31
LMBR1-208ENST00000434278 STAC3Q96MF2 364 aa29.48■■■□□ 2.31
LMBR1-208ENST00000434278 NUTM2FA1L443 756 aa29.46■■■□□ 2.31
LMBR1-208ENST00000434278 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.31
LMBR1-208ENST00000434278 PRAM1Q96QH2 718 aa29.45■■■□□ 2.31
LMBR1-208ENST00000434278 DLC1Q96QB1 1528 aa29.45■■■□□ 2.3
LMBR1-208ENST00000434278 POTEAQ6S8J7 498 aa29.44■■■□□ 2.3
LMBR1-208ENST00000434278 FMN2Q9NZ56 1722 aa29.44■■■□□ 2.3
LMBR1-208ENST00000434278 SOS2Q07890 1332 aaPredicted RBP29.44■■■□□ 2.3
LMBR1-208ENST00000434278 PNPLA6Q8IY17 1366 aa29.42■■■□□ 2.3
LMBR1-208ENST00000434278 NUTM2BA6NNL0 878 aaPredicted RBP29.42■■■□□ 2.3
LMBR1-208ENST00000434278 NUTM2EB1AL46 878 aaPredicted RBP29.42■■■□□ 2.3
LMBR1-208ENST00000434278 SAFB2Q14151 953 aaKnown RBP eCLIP29.42■■■□□ 2.3
LMBR1-208ENST00000434278 NUTM2AQ8IVF1 878 aaPredicted RBP29.42■■■□□ 2.3
LMBR1-208ENST00000434278 TRAK1Q9UPV9 953 aa29.41■■■□□ 2.3
LMBR1-208ENST00000434278 MEX3CQ5U5Q3 659 aaKnown RBP29.4■■■□□ 2.3
LMBR1-208ENST00000434278 POGKQ9P215 609 aa29.38■■■□□ 2.29
LMBR1-208ENST00000434278 FOXO3O43524 673 aa29.35■■■□□ 2.29
LMBR1-208ENST00000434278 NPHP3Q7Z494 1330 aa29.35■■■□□ 2.29
LMBR1-208ENST00000434278 PXDNQ92626 1479 aa29.35■■■□□ 2.29
LMBR1-208ENST00000434278 RGPD8O14715 1765 aaPredicted RBP29.32■■■□□ 2.28
LMBR1-208ENST00000434278 XPCQ01831 940 aaPredicted RBP29.32■■■□□ 2.28
LMBR1-208ENST00000434278 ADGRB2O60241 1585 aa29.3■■■□□ 2.28
LMBR1-208ENST00000434278 SIN3AQ96ST3 1273 aa29.3■■■□□ 2.28
LMBR1-208ENST00000434278 KIF1AQ12756 1690 aa29.29■■■□□ 2.28
LMBR1-208ENST00000434278 HIRIP3Q9BW71 556 aaPredicted RBP29.29■■■□□ 2.28
LMBR1-208ENST00000434278 KIAA1210Q9ULL0 1709 aa29.28■■■□□ 2.28
LMBR1-208ENST00000434278 MINK1Q8N4C8 1332 aaPredicted RBP29.27■■■□□ 2.28
LMBR1-208ENST00000434278 ZNF772Q68DY9 489 aaPredicted RBP29.27■■■□□ 2.28
LMBR1-208ENST00000434278 ARHGEF28Q8N1W1 1705 aaKnown RBP29.27■■■□□ 2.28
LMBR1-208ENST00000434278 USP32Q8NFA0 1604 aa29.27■■■□□ 2.28
LMBR1-208ENST00000434278 COL22A1Q8NFW1 1626 aaPredicted RBP29.26■■■□□ 2.27
LMBR1-208ENST00000434278 PHF8Q9UPP1 1060 aa29.25■■■□□ 2.27
LMBR1-208ENST00000434278 NBPF1Q3BBV0 1214 aa29.24■■■□□ 2.27
LMBR1-208ENST00000434278 L3MBTL2Q969R5 705 aa29.24■■■□□ 2.27
LMBR1-208ENST00000434278 AFF2P51816 1311 aa29.23■■■□□ 2.27
LMBR1-208ENST00000434278 ANKARQ7Z5J8 1434 aa29.23■■■□□ 2.27
LMBR1-208ENST00000434278 ADAMTS2O95450 1211 aa29.23■■■□□ 2.27
LMBR1-208ENST00000434278 C8orf37Q96NL8 207 aa29.23■■■□□ 2.27
LMBR1-208ENST00000434278 NEUROD1Q13562 356 aa29.21■■■□□ 2.27
LMBR1-208ENST00000434278 KRT28Q7Z3Y7 464 aa29.21■■■□□ 2.27
LMBR1-208ENST00000434278 WASLO00401 505 aaPredicted RBP29.2■■■□□ 2.26
LMBR1-208ENST00000434278 TRIM26Q12899 539 aaPredicted RBP29.2■■■□□ 2.26
LMBR1-208ENST00000434278 SPATA31A3Q5VYP0 1347 aa29.19■■■□□ 2.26
LMBR1-208ENST00000434278 PRR36Q9H6K5 1346 aa29.19■■■□□ 2.26
LMBR1-208ENST00000434278 TULP4Q9NRJ4 1543 aa29.17■■■□□ 2.26
LMBR1-208ENST00000434278 PMFBP1Q8TBY8 1022 aa29.17■■■□□ 2.26
LMBR1-208ENST00000434278 NGLY1Q96IV0 654 aa29.15■■■□□ 2.26
LMBR1-208ENST00000434278 EIF3AQ14152 1382 aaKnown RBP29.14■■■□□ 2.26
LMBR1-208ENST00000434278 PSME1Q06323 249 aa29.13■■■□□ 2.25
LMBR1-208ENST00000434278 RXRBP28702 533 aa29.11■■■□□ 2.25
LMBR1-208ENST00000434278 TNS3Q68CZ2 1445 aa29.11■■■□□ 2.25
LMBR1-208ENST00000434278 SBNO1A3KN83 1393 aa29.1■■■□□ 2.25
LMBR1-208ENST00000434278 CDK19Q9BWU1 502 aa29.08■■■□□ 2.25
LMBR1-208ENST00000434278 QTRT2Q9H974 415 aaKnown RBP29.08■■■□□ 2.25
LMBR1-208ENST00000434278 ATP7BP35670 1465 aa29.08■■■□□ 2.25
LMBR1-208ENST00000434278 TRPM1Q7Z4N2 1603 aa29.07■■■□□ 2.24
LMBR1-208ENST00000434278 FNBP4Q8N3X1 1017 aaPredicted RBP29.07■■■□□ 2.24
LMBR1-208ENST00000434278 MARF1Q9Y4F3 1742 aaKnown RBP29.07■■■□□ 2.24
LMBR1-208ENST00000434278 NUDT16Q96DE0 195 aaKnown RBP29.06■■■□□ 2.24
LMBR1-208ENST00000434278 USP21Q9UK80 565 aa29.06■■■□□ 2.24
LMBR1-208ENST00000434278 TRPM3Q9HCF6 1732 aaPredicted RBP29.04■■■□□ 2.24
LMBR1-208ENST00000434278 CENPJQ9HC77 1338 aaPredicted RBP29.03■■■□□ 2.24
LMBR1-208ENST00000434278 LMOD2Q6P5Q4 547 aa29.03■■■□□ 2.24
LMBR1-208ENST00000434278 ITSN1Q15811 1721 aa29.03■■■□□ 2.24
LMBR1-208ENST00000434278 CABLES1Q8TDN4 633 aa29.02■■■□□ 2.24
LMBR1-208ENST00000434278 CDK12Q9NYV4 1490 aaPredicted RBP29.02■■■□□ 2.24
LMBR1-208ENST00000434278 GPRASP1Q5JY77 1395 aa29.01■■■□□ 2.24
LMBR1-208ENST00000434278 PLEKHG5O94827 1062 aa29.01■■■□□ 2.23
LMBR1-208ENST00000434278 RBM6P78332 1123 aaKnown RBP29.01■■■□□ 2.23
LMBR1-208ENST00000434278 NGDNQ8NEJ9 315 aaKnown RBP29.01■■■□□ 2.23
LMBR1-208ENST00000434278 ARHGEF10O15013 1369 aa29.01■■■□□ 2.23
LMBR1-208ENST00000434278 NBPF8Q3BBV2 869 aa29■■■□□ 2.23
LMBR1-208ENST00000434278 BCL9LQ86UU0 1499 aa28.99■■■□□ 2.23
LMBR1-208ENST00000434278 TRPC5Q9UL62 973 aaPredicted RBP28.98■■■□□ 2.23
LMBR1-208ENST00000434278 TOPAZ1Q8N9V7 1692 aa28.98■■■□□ 2.23
LMBR1-208ENST00000434278 QRICH2Q9H0J4 1663 aa28.98■■■□□ 2.23
LMBR1-208ENST00000434278 ABCA3Q99758 1704 aa28.97■■■□□ 2.23
LMBR1-208ENST00000434278 ALS2Q96Q42 1657 aa28.97■■■□□ 2.23
LMBR1-208ENST00000434278 ROCK2O75116 1388 aaKnown RBP28.97■■■□□ 2.23
LMBR1-208ENST00000434278 ATRNO75882 1429 aa28.96■■■□□ 2.23
LMBR1-208ENST00000434278 RGS12O14924 1447 aa28.95■■■□□ 2.23
LMBR1-208ENST00000434278 HAP1P54257 671 aaPredicted RBP28.95■■■□□ 2.22
LMBR1-208ENST00000434278 CCDC61Q9Y6R9 512 aa28.95■■■□□ 2.22
LMBR1-208ENST00000434278 SLIT2O94813 1529 aa28.93■■■□□ 2.22
LMBR1-208ENST00000434278 TONSLQ96HA7 1378 aa28.92■■■□□ 2.22
LMBR1-208ENST00000434278 SRPK2P78362 688 aaKnown RBP28.92■■■□□ 2.22
LMBR1-208ENST00000434278 CABP2Q9NPB3 220 aa28.92■■■□□ 2.22
LMBR1-208ENST00000434278 POLR3AO14802 1390 aaPredicted RBP28.91■■■□□ 2.22
LMBR1-208ENST00000434278 PLEKHG3A1L390 1219 aa28.91■■■□□ 2.22
LMBR1-208ENST00000434278 PAK3O75914 559 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms