RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.92
SYNPO2-203ENST00000434046 HDGFL2Q7Z4V5 671 aaPredicted RBP9.29□□□□□ -0.92
SYNPO2-203ENST00000434046 EVC2Q86UK5 1308 aa9.29□□□□□ -0.92
SYNPO2-203ENST00000434046 U2AF1L5P0DN76 240 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-203ENST00000434046 U2AF1Q01081 240 aaKnown RBP eCLIP9.28□□□□□ -0.92
SYNPO2-203ENST00000434046 PDCL3Q9H2J4 239 aa9.28□□□□□ -0.92
SYNPO2-203ENST00000434046 PTMAP06454 111 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-203ENST00000434046 E9PSI1 815 aa9.28□□□□□ -0.92
SYNPO2-203ENST00000434046 PPP2R1AP30153 589 aa9.28□□□□□ -0.92
SYNPO2-203ENST00000434046 SLFN5Q08AF3 891 aa9.28□□□□□ -0.92
SYNPO2-203ENST00000434046 PRAG1Q86YV5 1406 aa9.27□□□□□ -0.92
SYNPO2-203ENST00000434046 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-203ENST00000434046 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
SYNPO2-203ENST00000434046 DDX49Q9Y6V7 483 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-203ENST00000434046 ARHGEF5Q12774 1597 aa9.27□□□□□ -0.93
SYNPO2-203ENST00000434046 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-203ENST00000434046 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
SYNPO2-203ENST00000434046 PARD3Q8TEW0 1356 aa9.26□□□□□ -0.93
SYNPO2-203ENST00000434046 PLEKHH1Q9ULM0 1364 aa9.26□□□□□ -0.93
SYNPO2-203ENST00000434046 ADGRF5Q8IZF2 1346 aa9.26□□□□□ -0.93
SYNPO2-203ENST00000434046 SAMD9LQ8IVG5 1584 aa9.26□□□□□ -0.93
SYNPO2-203ENST00000434046 ARHGEF12Q9NZN5 1544 aa9.26□□□□□ -0.93
SYNPO2-203ENST00000434046 ZCCHC11Q5TAX3 1644 aaKnown RBP9.26□□□□□ -0.93
SYNPO2-203ENST00000434046 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.25□□□□□ -0.93
SYNPO2-203ENST00000434046 CDC42BPAQ5VT25 1732 aa9.25□□□□□ -0.93
SYNPO2-203ENST00000434046 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
SYNPO2-203ENST00000434046 PRDM10Q9NQV6 1147 aa9.25□□□□□ -0.93
SYNPO2-203ENST00000434046 USP19O94966 1318 aa9.25□□□□□ -0.93
SYNPO2-203ENST00000434046 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 UHRF1BP1Q6BDS2 1440 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 SLC52A1Q9NWF4 448 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 RTEL1-TNFRSF6BF6WH68 1400 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 SLC12A5Q9H2X9 1139 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 SPINK5Q9NQ38 1064 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 FSD2A1L4K1 749 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 PER1O15534 1290 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 PDE3AQ14432 1141 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 BCORL1Q5H9F3 1711 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 ERBB4Q15303 1308 aa9.24□□□□□ -0.93
SYNPO2-203ENST00000434046 C14orf37Q86TY3 774 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 ITPRIPQ8IWB1 547 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 ANTXR1Q9H6X2 564 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 MYO5CQ9NQX4 1742 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 SKOR2Q2VWA4 1001 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 DIP2BQ9P265 1576 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 ZSCAN30Q86W11 494 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 PREX2Q70Z35 1606 aa9.23□□□□□ -0.93
SYNPO2-203ENST00000434046 A2MP01023 1474 aa9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 ZNF518AQ6AHZ1 1483 aa9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 SOX12O15370 315 aa9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 CALD1Q05682 793 aaKnown RBP9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 TESK2Q96S53 571 aa9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 ZHX1Q9UKY1 873 aaPredicted RBP9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 CCDC173Q0VFZ6 552 aa9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 TNPO1Q92973 898 aaKnown RBP9.22□□□□□ -0.93
SYNPO2-203ENST00000434046 UQCRHLA0A096LP55 91 aa9.21□□□□□ -0.93
SYNPO2-203ENST00000434046 UQCRHP07919 91 aa9.21□□□□□ -0.93
SYNPO2-203ENST00000434046 XPCQ01831 940 aaPredicted RBP9.21□□□□□ -0.93
SYNPO2-203ENST00000434046 TNNQ9UQP3 1299 aa9.21□□□□□ -0.93
SYNPO2-203ENST00000434046 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.93
SYNPO2-203ENST00000434046 SCAF11Q99590 1463 aaKnown RBP9.21□□□□□ -0.93
SYNPO2-203ENST00000434046 IDI1Q13907 227 aa9.21□□□□□ -0.94
SYNPO2-203ENST00000434046 ISY1Q9ULR0 285 aaKnown RBP9.21□□□□□ -0.94
SYNPO2-203ENST00000434046 GLI2P10070 1586 aa9.21□□□□□ -0.94
SYNPO2-203ENST00000434046 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
SYNPO2-203ENST00000434046 NOS1P29475 1434 aa9.2□□□□□ -0.94
SYNPO2-203ENST00000434046 FOXD4L5Q5VV16 416 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-203ENST00000434046 CAVIN1Q6NZI2 390 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-203ENST00000434046 GAS2L3Q86XJ1 694 aa9.2□□□□□ -0.94
SYNPO2-203ENST00000434046 FOXD4L4Q8WXT5 416 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-203ENST00000434046 SMC4Q9NTJ3 1288 aa9.2□□□□□ -0.94
SYNPO2-203ENST00000434046 PTMSP20962 102 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 MAP7D2Q96T17 732 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 GGNBP2Q9H3C7 697 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 NKTRP30414 1462 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 ATP7AQ04656 1500 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 MTHFSP49914 203 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 MCTP1Q6DN14 999 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 PRAM1Q96QH2 718 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 LNPKQ9C0E8 428 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 EID1Q9Y6B2 187 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
SYNPO2-203ENST00000434046 MAST1Q9Y2H9 1570 aa9.18□□□□□ -0.94
SYNPO2-203ENST00000434046 MPNDQ8N594 471 aa9.18□□□□□ -0.94
SYNPO2-203ENST00000434046 DMRT2Q9Y5R5 561 aa9.18□□□□□ -0.94
SYNPO2-203ENST00000434046 FBXO31Q5XUX0 539 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-203ENST00000434046 ZMYM4Q5VZL5 1548 aa9.18□□□□□ -0.94
SYNPO2-203ENST00000434046 BLMP54132 1417 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-203ENST00000434046 RNF214Q8ND24 703 aa9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 ZKSCAN2Q63HK3 967 aa9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 KIF13AQ9H1H9 1805 aa9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 ABCC1P33527 1531 aa9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 KDM5CP41229 1560 aa9.17□□□□□ -0.94
SYNPO2-203ENST00000434046 RLBP1P12271 317 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms