RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 KCNA6P17658 529 aa21.3■■□□□ 1
RBM39-213ENST00000433027 ADGRB2O60241 1585 aa21.3■■□□□ 1
RBM39-213ENST00000433027 NKTRP30414 1462 aaKnown RBP21.29■■□□□ 1
RBM39-213ENST00000433027 ATAD2Q6PL18 1390 aa21.27■■□□□ 1
RBM39-213ENST00000433027 ROBO2Q9HCK4 1378 aa21.27■■□□□ 1
RBM39-213ENST00000433027 STRCQ7RTU9 1775 aa21.27■■□□□ 1
RBM39-213ENST00000433027 NCOA3Q9Y6Q9 1424 aa21.26■□□□□ 0.99
RBM39-213ENST00000433027 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
RBM39-213ENST00000433027 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
RBM39-213ENST00000433027 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
RBM39-213ENST00000433027 WAPLQ7Z5K2 1190 aa21.21■□□□□ 0.99
RBM39-213ENST00000433027 PLEKHH1Q9ULM0 1364 aa21.21■□□□□ 0.99
RBM39-213ENST00000433027 WASLO00401 505 aaPredicted RBP21.2■□□□□ 0.98
RBM39-213ENST00000433027 MINK1Q8N4C8 1332 aaPredicted RBP21.19■□□□□ 0.98
RBM39-213ENST00000433027 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.17■□□□□ 0.98
RBM39-213ENST00000433027 MYOM1P52179 1685 aa21.16■□□□□ 0.98
RBM39-213ENST00000433027 KTN1Q86UP2 1357 aaKnown RBP21.16■□□□□ 0.98
RBM39-213ENST00000433027 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
RBM39-213ENST00000433027 CDK19Q9BWU1 502 aa21.16■□□□□ 0.98
RBM39-213ENST00000433027 CDC42BPGQ6DT37 1551 aa21.15■□□□□ 0.98
RBM39-213ENST00000433027 ADGRL3Q9HAR2 1447 aa21.15■□□□□ 0.98
RBM39-213ENST00000433027 SRPK2P78362 688 aaKnown RBP21.15■□□□□ 0.98
RBM39-213ENST00000433027 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
RBM39-213ENST00000433027 ANKARQ7Z5J8 1434 aa21.14■□□□□ 0.98
RBM39-213ENST00000433027 DCCP43146 1447 aa21.12■□□□□ 0.97
RBM39-213ENST00000433027 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
RBM39-213ENST00000433027 ATP7BP35670 1465 aa21.12■□□□□ 0.97
RBM39-213ENST00000433027 ANKRD36BQ8N2N9 1353 aa21.11■□□□□ 0.97
RBM39-213ENST00000433027 ANP32CO43423 234 aa21.11■□□□□ 0.97
RBM39-213ENST00000433027 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
RBM39-213ENST00000433027 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
RBM39-213ENST00000433027 PER1O15534 1290 aaPredicted RBP21.09■□□□□ 0.97
RBM39-213ENST00000433027 PROSER2Q86WR7 435 aaPredicted RBP21.09■□□□□ 0.97
RBM39-213ENST00000433027 PANK3Q9H999 370 aa21.09■□□□□ 0.97
RBM39-213ENST00000433027 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
RBM39-213ENST00000433027 ITSN1Q15811 1721 aa21.09■□□□□ 0.97
RBM39-213ENST00000433027 NALCNQ8IZF0 1738 aa21.07■□□□□ 0.96
RBM39-213ENST00000433027 FMN2Q9NZ56 1722 aa21.07■□□□□ 0.96
RBM39-213ENST00000433027 USP32Q8NFA0 1604 aa21.07■□□□□ 0.96
RBM39-213ENST00000433027 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
RBM39-213ENST00000433027 NUDT16Q96DE0 195 aaKnown RBP21.06■□□□□ 0.96
RBM39-213ENST00000433027 C19orf44Q9H6X5 657 aa21.06■□□□□ 0.96
RBM39-213ENST00000433027 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
RBM39-213ENST00000433027 HDGFL2Q7Z4V5 671 aaPredicted RBP21.05■□□□□ 0.96
RBM39-213ENST00000433027 TMC1Q8TDI8 760 aa21.05■□□□□ 0.96
RBM39-213ENST00000433027 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
RBM39-213ENST00000433027 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
RBM39-213ENST00000433027 PLEKHG3A1L390 1219 aa21.04■□□□□ 0.96
RBM39-213ENST00000433027 NSD2O96028 1365 aa21.04■□□□□ 0.96
RBM39-213ENST00000433027 RALBP1Q15311 655 aa21.03■□□□□ 0.96
RBM39-213ENST00000433027 SLC12A5Q9H2X9 1139 aa21.03■□□□□ 0.96
RBM39-213ENST00000433027 PPIP5K1Q6PFW1 1433 aa21.03■□□□□ 0.96
RBM39-213ENST00000433027 BRD4O60885 1362 aaPredicted RBP21.02■□□□□ 0.96
RBM39-213ENST00000433027 TMEM94Q12767 1356 aa21.02■□□□□ 0.96
RBM39-213ENST00000433027 CPSF1Q10570 1443 aaKnown RBP21.02■□□□□ 0.96
RBM39-213ENST00000433027 CCER2I3L3R5 266 aa21.01■□□□□ 0.95
RBM39-213ENST00000433027 C14orf37Q86TY3 774 aa21■□□□□ 0.95
RBM39-213ENST00000433027 PRKRIP1Q9H875 184 aaPredicted RBP21■□□□□ 0.95
RBM39-213ENST00000433027 CABP1Q9NZU7 370 aa21■□□□□ 0.95
RBM39-213ENST00000433027 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
RBM39-213ENST00000433027 MSH6P52701 1360 aa20.99■□□□□ 0.95
RBM39-213ENST00000433027 CADPS2Q86UW7 1296 aa20.99■□□□□ 0.95
RBM39-213ENST00000433027 CD163L1Q9NR16 1453 aa20.99■□□□□ 0.95
RBM39-213ENST00000433027 CGNL1Q0VF96 1302 aa20.99■□□□□ 0.95
RBM39-213ENST00000433027 PRR36Q9H6K5 1346 aa20.99■□□□□ 0.95
RBM39-213ENST00000433027 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
RBM39-213ENST00000433027 POLR3AO14802 1390 aaPredicted RBP20.98■□□□□ 0.95
RBM39-213ENST00000433027 AMER1Q5JTC6 1135 aaPredicted RBP20.98■□□□□ 0.95
RBM39-213ENST00000433027 EDC4Q6P2E9 1401 aaKnown RBP20.97■□□□□ 0.95
RBM39-213ENST00000433027 AKAP12Q02952 1782 aa20.97■□□□□ 0.95
RBM39-213ENST00000433027 PARD3Q8TEW0 1356 aa20.97■□□□□ 0.95
RBM39-213ENST00000433027 MIER1Q8N108 512 aa20.96■□□□□ 0.95
RBM39-213ENST00000433027 ZNF335Q9H4Z2 1342 aaPredicted RBP20.96■□□□□ 0.95
RBM39-213ENST00000433027 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.95
RBM39-213ENST00000433027 ATF3P18847 181 aa20.95■□□□□ 0.94
RBM39-213ENST00000433027 CARD14Q9BXL6 1004 aa20.95■□□□□ 0.94
RBM39-213ENST00000433027 MON2Q7Z3U7 1717 aa20.95■□□□□ 0.94
RBM39-213ENST00000433027 KIF1AQ12756 1690 aa20.93■□□□□ 0.94
RBM39-213ENST00000433027 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
RBM39-213ENST00000433027 C1orf167Q5SNV9 1468 aa20.9■□□□□ 0.94
RBM39-213ENST00000433027 ACEP12821 1306 aa20.9■□□□□ 0.94
RBM39-213ENST00000433027 TTC21AQ8NDW8 1320 aa20.9■□□□□ 0.94
RBM39-213ENST00000433027 MYBBP1AQ9BQG0 1328 aaKnown RBP20.9■□□□□ 0.94
RBM39-213ENST00000433027 USP6P35125 1406 aa20.89■□□□□ 0.94
RBM39-213ENST00000433027 MST1RQ04912 1400 aa20.89■□□□□ 0.94
RBM39-213ENST00000433027 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.93
RBM39-213ENST00000433027 LTBP4Q8N2S1 1624 aa20.89■□□□□ 0.93
RBM39-213ENST00000433027 RGPD8O14715 1765 aaPredicted RBP20.88■□□□□ 0.93
RBM39-213ENST00000433027 ANKRD26Q9UPS8 1709 aa20.87■□□□□ 0.93
RBM39-213ENST00000433027 NGDNQ8NEJ9 315 aaKnown RBP20.87■□□□□ 0.93
RBM39-213ENST00000433027 NRKQ7Z2Y5 1582 aa20.87■□□□□ 0.93
RBM39-213ENST00000433027 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
RBM39-213ENST00000433027 KIF20BQ96Q89 1820 aa20.85■□□□□ 0.93
RBM39-213ENST00000433027 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
RBM39-213ENST00000433027 NLRP13Q86W25 1043 aa20.85■□□□□ 0.93
RBM39-213ENST00000433027 IQSEC2Q5JU85 1478 aa20.85■□□□□ 0.93
RBM39-213ENST00000433027 ESCO1Q5FWF5 840 aa20.83■□□□□ 0.93
RBM39-213ENST00000433027 CC2D1BQ5T0F9 858 aaKnown RBP20.83■□□□□ 0.93
RBM39-213ENST00000433027 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.93
RBM39-213ENST00000433027 NUTM2FA1L443 756 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms