RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 ANKRD50Q9ULJ7 1429 aa15.88■□□□□ 0.13
HOXD3-203ENST00000432796 SEPT12Q8IYM1 358 aa15.88■□□□□ 0.13
HOXD3-203ENST00000432796 ADGRL2O95490 1459 aa15.88■□□□□ 0.13
HOXD3-203ENST00000432796 SLIT2O94813 1529 aa15.88■□□□□ 0.13
HOXD3-203ENST00000432796 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
HOXD3-203ENST00000432796 NPHP3Q7Z494 1330 aa15.87■□□□□ 0.13
HOXD3-203ENST00000432796 KRT27Q7Z3Y8 459 aa15.85■□□□□ 0.13
HOXD3-203ENST00000432796 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
HOXD3-203ENST00000432796 PXDNQ92626 1479 aa15.84■□□□□ 0.13
HOXD3-203ENST00000432796 ONECUT3O60422 494 aaPredicted RBP15.83■□□□□ 0.12
HOXD3-203ENST00000432796 IQGAP3Q86VI3 1631 aa15.82■□□□□ 0.12
HOXD3-203ENST00000432796 MARF1Q9Y4F3 1742 aaKnown RBP15.82■□□□□ 0.12
HOXD3-203ENST00000432796 VPS72Q15906 364 aa15.81■□□□□ 0.12
HOXD3-203ENST00000432796 IFFO2Q5TF58 517 aa15.81■□□□□ 0.12
HOXD3-203ENST00000432796 BRWD3Q6RI45 1802 aa15.8■□□□□ 0.12
HOXD3-203ENST00000432796 E9PCH4 1651 aa15.8■□□□□ 0.12
HOXD3-203ENST00000432796 ROBO2Q9HCK4 1378 aa15.8■□□□□ 0.12
HOXD3-203ENST00000432796 EN1Q05925 392 aaPredicted RBP15.79■□□□□ 0.12
HOXD3-203ENST00000432796 ESCO1Q5FWF5 840 aa15.79■□□□□ 0.12
HOXD3-203ENST00000432796 PRAG1Q86YV5 1406 aa15.78■□□□□ 0.12
HOXD3-203ENST00000432796 FOXO3O43524 673 aa15.78■□□□□ 0.12
HOXD3-203ENST00000432796 XPCQ01831 940 aaPredicted RBP15.78■□□□□ 0.12
HOXD3-203ENST00000432796 ZNF326Q5BKZ1 582 aaKnown RBP15.78■□□□□ 0.12
HOXD3-203ENST00000432796 LRPPRCP42704 1394 aaKnown RBP15.77■□□□□ 0.12
HOXD3-203ENST00000432796 DISP2A7MBM2 1401 aa15.77■□□□□ 0.11
HOXD3-203ENST00000432796 HFM1A2PYH4 1435 aa15.76■□□□□ 0.11
HOXD3-203ENST00000432796 CCDC9Q9Y3X0 531 aaKnown RBP15.75■□□□□ 0.11
HOXD3-203ENST00000432796 USP32Q8NFA0 1604 aa15.74■□□□□ 0.11
HOXD3-203ENST00000432796 SPATA31A3Q5VYP0 1347 aa15.73■□□□□ 0.11
HOXD3-203ENST00000432796 A0A0G2JS52 829 aa15.73■□□□□ 0.11
HOXD3-203ENST00000432796 MYT1Q01538 1121 aa15.73■□□□□ 0.11
HOXD3-203ENST00000432796 CDC42BPGQ6DT37 1551 aa15.72■□□□□ 0.11
HOXD3-203ENST00000432796 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
HOXD3-203ENST00000432796 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
HOXD3-203ENST00000432796 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
HOXD3-203ENST00000432796 EZH2Q15910 746 aaKnown RBP15.7■□□□□ 0.1
HOXD3-203ENST00000432796 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
HOXD3-203ENST00000432796 FAM50AQ14320 339 aaKnown RBP15.69■□□□□ 0.1
HOXD3-203ENST00000432796 NUP155O75694 1391 aa15.69■□□□□ 0.1
HOXD3-203ENST00000432796 CCDC144AA2RUR9 1427 aa15.68■□□□□ 0.1
HOXD3-203ENST00000432796 RGPD1P0DJD0 1748 aa15.68■□□□□ 0.1
HOXD3-203ENST00000432796 FAM98CQ17RN3 349 aaKnown RBP15.68■□□□□ 0.1
HOXD3-203ENST00000432796 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
HOXD3-203ENST00000432796 NWD2Q9ULI1 1742 aa15.66■□□□□ 0.1
HOXD3-203ENST00000432796 PARD3Q8TEW0 1356 aa15.66■□□□□ 0.1
HOXD3-203ENST00000432796 CAMKK2Q96RR4 588 aa15.66■□□□□ 0.1
HOXD3-203ENST00000432796 FAM182BQ5T319 152 aa15.65■□□□□ 0.1
HOXD3-203ENST00000432796 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
HOXD3-203ENST00000432796 PPP1R1BQ9UD71 204 aaPredicted RBP15.65■□□□□ 0.1
HOXD3-203ENST00000432796 UTRNP46939 3433 aa15.65■□□□□ 0.1
HOXD3-203ENST00000432796 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
HOXD3-203ENST00000432796 VGFO15240 615 aaPredicted RBP15.64■□□□□ 0.09
HOXD3-203ENST00000432796 ADGRB2O60241 1585 aa15.64■□□□□ 0.09
HOXD3-203ENST00000432796 NAIPQ13075 1403 aa15.64■□□□□ 0.09
HOXD3-203ENST00000432796 TNS3Q68CZ2 1445 aa15.64■□□□□ 0.09
HOXD3-203ENST00000432796 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
HOXD3-203ENST00000432796 NUTM2FA1L443 756 aa15.63■□□□□ 0.09
HOXD3-203ENST00000432796 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
HOXD3-203ENST00000432796 SPON1Q9HCB6 807 aa15.63■□□□□ 0.09
HOXD3-203ENST00000432796 TNS1Q9HBL0 1735 aaKnown RBP15.62■□□□□ 0.09
HOXD3-203ENST00000432796 FAM83GA6ND36 823 aa15.61■□□□□ 0.09
HOXD3-203ENST00000432796 ROCK1Q13464 1354 aa15.61■□□□□ 0.09
HOXD3-203ENST00000432796 C1QTNF8P60827 252 aa15.6■□□□□ 0.09
HOXD3-203ENST00000432796 KIF1AQ12756 1690 aa15.59■□□□□ 0.09
HOXD3-203ENST00000432796 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
HOXD3-203ENST00000432796 CLTCL1P53675 1640 aa15.58■□□□□ 0.09
HOXD3-203ENST00000432796 KCNQ2O43526 872 aa15.58■□□□□ 0.08
HOXD3-203ENST00000432796 TRIM37O94972 964 aa15.58■□□□□ 0.08
HOXD3-203ENST00000432796 PSME1Q06323 249 aa15.58■□□□□ 0.08
HOXD3-203ENST00000432796 NBPF8Q3BBV2 869 aa15.58■□□□□ 0.08
HOXD3-203ENST00000432796 NBPF14Q5TI25 921 aa15.58■□□□□ 0.08
HOXD3-203ENST00000432796 BTG4Q9NY30 223 aa15.58■□□□□ 0.08
HOXD3-203ENST00000432796 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
HOXD3-203ENST00000432796 APBA3O96018 575 aa15.57■□□□□ 0.08
HOXD3-203ENST00000432796 FAM196AQ6ZSG2 479 aa15.57■□□□□ 0.08
HOXD3-203ENST00000432796 SPATA31A5Q5VU36 1347 aa15.57■□□□□ 0.08
HOXD3-203ENST00000432796 SPATA31A7Q8IWB4 1347 aa15.57■□□□□ 0.08
HOXD3-203ENST00000432796 SBNO1A3KN83 1393 aa15.57■□□□□ 0.08
HOXD3-203ENST00000432796 NRAPQ86VF7 1730 aa15.57■□□□□ 0.08
HOXD3-203ENST00000432796 THSD7AQ9UPZ6 1657 aa15.56■□□□□ 0.08
HOXD3-203ENST00000432796 TECPR2O15040 1411 aa15.55■□□□□ 0.08
HOXD3-203ENST00000432796 LMOD2Q6P5Q4 547 aa15.55■□□□□ 0.08
HOXD3-203ENST00000432796 RPGRIP1LQ68CZ1 1315 aa15.54■□□□□ 0.08
HOXD3-203ENST00000432796 WAPLQ7Z5K2 1190 aa15.54■□□□□ 0.08
HOXD3-203ENST00000432796 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
HOXD3-203ENST00000432796 PHF8Q9UPP1 1060 aa15.53■□□□□ 0.08
HOXD3-203ENST00000432796 RREB1Q92766 1687 aa15.53■□□□□ 0.08
HOXD3-203ENST00000432796 RRBP1Q9P2E9 1410 aaKnown RBP15.52■□□□□ 0.08
HOXD3-203ENST00000432796 CAMTA1Q9Y6Y1 1673 aa15.52■□□□□ 0.08
HOXD3-203ENST00000432796 CEP350Q5VT06 3117 aa15.52■□□□□ 0.08
HOXD3-203ENST00000432796 FMN2Q9NZ56 1722 aa15.51■□□□□ 0.07
HOXD3-203ENST00000432796 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
HOXD3-203ENST00000432796 PLEKHH1Q9ULM0 1364 aa15.5■□□□□ 0.07
HOXD3-203ENST00000432796 NRXN1Q9ULB1 1477 aa15.5■□□□□ 0.07
HOXD3-203ENST00000432796 ABCC11Q96J66 1382 aa15.49■□□□□ 0.07
HOXD3-203ENST00000432796 ITGAEP38570 1179 aa15.49■□□□□ 0.07
HOXD3-203ENST00000432796 STK26Q9P289 416 aa15.49■□□□□ 0.07
HOXD3-203ENST00000432796 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
HOXD3-203ENST00000432796 SPATA31A1Q5TZJ5 1347 aa15.47■□□□□ 0.07
HOXD3-203ENST00000432796 KIF1BO60333 1816 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms