RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 USP47Q96K76 1375 aa12.18□□□□□ -0.46
FN1-209ENST00000432072 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
FN1-209ENST00000432072 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
FN1-209ENST00000432072 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
FN1-209ENST00000432072 XPCQ01831 940 aaPredicted RBP12.18□□□□□ -0.46
FN1-209ENST00000432072 MTMR7Q9Y216 660 aa12.18□□□□□ -0.46
FN1-209ENST00000432072 MCTP1Q6DN14 999 aa12.18□□□□□ -0.46
FN1-209ENST00000432072 CNNM1Q9NRU3 951 aa12.18□□□□□ -0.46
FN1-209ENST00000432072 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
FN1-209ENST00000432072 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
FN1-209ENST00000432072 GNL3LQ9NVN8 582 aaKnown RBP12.17□□□□□ -0.46
FN1-209ENST00000432072 SLC52A1Q9NWF4 448 aa12.17□□□□□ -0.46
FN1-209ENST00000432072 TSPOAP1O95153 1857 aa12.17□□□□□ -0.46
FN1-209ENST00000432072 SLC3A2P08195 630 aaKnown RBP12.17□□□□□ -0.46
FN1-209ENST00000432072 MYBBP1AQ9BQG0 1328 aaKnown RBP12.17□□□□□ -0.46
FN1-209ENST00000432072 ATP2B2Q01814 1243 aa12.17□□□□□ -0.46
FN1-209ENST00000432072 GAS2L2Q8NHY3 880 aa12.17□□□□□ -0.46
FN1-209ENST00000432072 CPLX1O14810 134 aa12.17□□□□□ -0.46
FN1-209ENST00000432072 MTHFSP49914 203 aa12.17□□□□□ -0.46
FN1-209ENST00000432072 ZPR1O75312 459 aa12.16□□□□□ -0.46
FN1-209ENST00000432072 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
FN1-209ENST00000432072 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
FN1-209ENST00000432072 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
FN1-209ENST00000432072 TBC1D2BQ9UPU7 963 aa12.16□□□□□ -0.46
FN1-209ENST00000432072 IGF1RP08069 1367 aa12.16□□□□□ -0.46
FN1-209ENST00000432072 GGNBP2Q9H3C7 697 aa12.15□□□□□ -0.46
FN1-209ENST00000432072 RUSC2Q8N2Y8 1516 aa12.15□□□□□ -0.46
FN1-209ENST00000432072 MSNP26038 577 aaKnown RBP12.15□□□□□ -0.46
FN1-209ENST00000432072 TCERG1O14776 1098 aaKnown RBP12.15□□□□□ -0.46
FN1-209ENST00000432072 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
FN1-209ENST00000432072 TOM1O60784 492 aa12.15□□□□□ -0.46
FN1-209ENST00000432072 KIF14Q15058 1648 aa12.15□□□□□ -0.47
FN1-209ENST00000432072 ANKRD50Q9ULJ7 1429 aa12.15□□□□□ -0.47
FN1-209ENST00000432072 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
FN1-209ENST00000432072 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
FN1-209ENST00000432072 E9PSI1 815 aa12.14□□□□□ -0.47
FN1-209ENST00000432072 C16orf71Q8IYS4 520 aaPredicted RBP12.14□□□□□ -0.47
FN1-209ENST00000432072 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
FN1-209ENST00000432072 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
FN1-209ENST00000432072 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
FN1-209ENST00000432072 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
FN1-209ENST00000432072 MPHOSPH8Q99549 860 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 CUL7Q14999 1698 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 GNAI1P63096 354 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 TPM3P06753 285 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 ZSCAN29Q8IWY8 852 aaPredicted RBP12.13□□□□□ -0.47
FN1-209ENST00000432072 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
FN1-209ENST00000432072 ZC3H6P61129 1189 aaKnown RBP12.12□□□□□ -0.47
FN1-209ENST00000432072 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
FN1-209ENST00000432072 ERC2O15083 957 aa12.12□□□□□ -0.47
FN1-209ENST00000432072 BICDL1Q6ZP65 573 aa12.12□□□□□ -0.47
FN1-209ENST00000432072 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
FN1-209ENST00000432072 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
FN1-209ENST00000432072 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
FN1-209ENST00000432072 ANO2Q9NQ90 1003 aa12.12□□□□□ -0.47
FN1-209ENST00000432072 BRMS1Q9HCU9 246 aa12.11□□□□□ -0.47
FN1-209ENST00000432072 RTEL1-TNFRSF6BF6WH68 1400 aa12.11□□□□□ -0.47
FN1-209ENST00000432072 STARD3NLO95772 234 aa12.11□□□□□ -0.47
FN1-209ENST00000432072 IQGAP2Q13576 1575 aa12.11□□□□□ -0.47
FN1-209ENST00000432072 UBTFL1P0CB47 393 aaPredicted RBP12.11□□□□□ -0.47
FN1-209ENST00000432072 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
FN1-209ENST00000432072 LRPPRCP42704 1394 aaKnown RBP12.11□□□□□ -0.47
FN1-209ENST00000432072 PHF14O94880 888 aa12.1□□□□□ -0.47
FN1-209ENST00000432072 MYL6BP14649 208 aa12.1□□□□□ -0.47
FN1-209ENST00000432072 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
FN1-209ENST00000432072 C9orf84Q5VXU9 1444 aa12.1□□□□□ -0.47
FN1-209ENST00000432072 TPM1P09493 284 aa12.1□□□□□ -0.47
FN1-209ENST00000432072 PAF1Q8N7H5 531 aa12.1□□□□□ -0.47
FN1-209ENST00000432072 XBP1P17861 261 aa12.09□□□□□ -0.47
FN1-209ENST00000432072 FOXD4L5Q5VV16 416 aaPredicted RBP12.09□□□□□ -0.47
FN1-209ENST00000432072 FOXD4L4Q8WXT5 416 aaPredicted RBP12.09□□□□□ -0.47
FN1-209ENST00000432072 TMOD2Q9NZR1 351 aa12.09□□□□□ -0.47
FN1-209ENST00000432072 SART3Q15020 963 aaKnown RBP12.09□□□□□ -0.47
FN1-209ENST00000432072 ODF2Q5BJF6 829 aa12.09□□□□□ -0.47
FN1-209ENST00000432072 TTC39AQ5SRH9 613 aa12.08□□□□□ -0.47
FN1-209ENST00000432072 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.47
FN1-209ENST00000432072 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
FN1-209ENST00000432072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.48
FN1-209ENST00000432072 APAF1O14727 1248 aa12.08□□□□□ -0.48
FN1-209ENST00000432072 CFTRP13569 1480 aa12.08□□□□□ -0.48
FN1-209ENST00000432072 EFCAB5A4FU69 1503 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
FN1-209ENST00000432072 EPS15P42566 896 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
FN1-209ENST00000432072 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 EHBP1L1Q8N3D4 1523 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 NCOA2Q15596 1464 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 CCDC57Q2TAC2 916 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 KCNH5Q8NCM2 988 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 NOP58Q9Y2X3 529 aaKnown RBP12.07□□□□□ -0.48
FN1-209ENST00000432072 ANKRD20A12PQ8NF67 263 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 DDX19BQ9UMR2 479 aa12.07□□□□□ -0.48
FN1-209ENST00000432072 ERBINQ96RT1 1412 aa12.06□□□□□ -0.48
FN1-209ENST00000432072 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
FN1-209ENST00000432072 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
FN1-209ENST00000432072 CCDC158Q5M9N0 1113 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms