RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 POGZQ7Z3K3 1410 aa14.64□□□□□ -0.07
CLDN4-202ENST00000431918 WWC1Q8IX03 1113 aa14.64□□□□□ -0.07
CLDN4-202ENST00000431918 DIAPH1O60610 1272 aaKnown RBP14.63□□□□□ -0.07
CLDN4-202ENST00000431918 FBLN1P23142 703 aa14.63□□□□□ -0.07
CLDN4-202ENST00000431918 TRPM2O94759 1503 aa14.63□□□□□ -0.07
CLDN4-202ENST00000431918 PTPRTO14522 1441 aa14.63□□□□□ -0.07
CLDN4-202ENST00000431918 PRDM15P57071 1507 aaPredicted RBP14.63□□□□□ -0.07
CLDN4-202ENST00000431918 CENPQQ7L2Z9 268 aaPredicted RBP14.63□□□□□ -0.07
CLDN4-202ENST00000431918 TSR2Q969E8 191 aaKnown RBP14.63□□□□□ -0.07
CLDN4-202ENST00000431918 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
CLDN4-202ENST00000431918 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
CLDN4-202ENST00000431918 UPF2Q9HAU5 1272 aaKnown RBP14.62□□□□□ -0.07
CLDN4-202ENST00000431918 RIPK4P57078 832 aa14.62□□□□□ -0.07
CLDN4-202ENST00000431918 PNNQ9H307 717 aaKnown RBP14.61□□□□□ -0.07
CLDN4-202ENST00000431918 CLTCL1P53675 1640 aa14.61□□□□□ -0.07
CLDN4-202ENST00000431918 YEATS2Q9ULM3 1422 aa14.6□□□□□ -0.07
CLDN4-202ENST00000431918 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
CLDN4-202ENST00000431918 SLC4A3P48751 1232 aa14.6□□□□□ -0.07
CLDN4-202ENST00000431918 E9PCH4 1651 aa14.6□□□□□ -0.07
CLDN4-202ENST00000431918 DDRGK1Q96HY6 314 aa14.59□□□□□ -0.07
CLDN4-202ENST00000431918 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
CLDN4-202ENST00000431918 RNF123Q5XPI4 1314 aa14.58□□□□□ -0.08
CLDN4-202ENST00000431918 COG3Q96JB2 828 aa14.57□□□□□ -0.08
CLDN4-202ENST00000431918 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
CLDN4-202ENST00000431918 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
CLDN4-202ENST00000431918 EID1Q9Y6B2 187 aa14.56□□□□□ -0.08
CLDN4-202ENST00000431918 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
CLDN4-202ENST00000431918 CEBPAP49715 358 aaPredicted RBP14.56□□□□□ -0.08
CLDN4-202ENST00000431918 LMOD2Q6P5Q4 547 aa14.56□□□□□ -0.08
CLDN4-202ENST00000431918 PRKAR2BP31323 418 aa14.55□□□□□ -0.08
CLDN4-202ENST00000431918 PKNOX2Q96KN3 472 aa14.55□□□□□ -0.08
CLDN4-202ENST00000431918 TET3O43151 1660 aa14.55□□□□□ -0.08
CLDN4-202ENST00000431918 ARAP3Q8WWN8 1544 aa14.55□□□□□ -0.08
CLDN4-202ENST00000431918 MS4A1P11836 297 aa14.55□□□□□ -0.08
CLDN4-202ENST00000431918 ZKSCAN2Q63HK3 967 aa14.55□□□□□ -0.08
CLDN4-202ENST00000431918 NGDNQ8NEJ9 315 aaKnown RBP14.55□□□□□ -0.08
CLDN4-202ENST00000431918 ERVK-7P63135 1459 aa14.55□□□□□ -0.08
CLDN4-202ENST00000431918 POLR1AO95602 1720 aaPredicted RBP14.54□□□□□ -0.08
CLDN4-202ENST00000431918 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLDN4-202ENST00000431918 IL27Q8NEV9 243 aa14.54□□□□□ -0.08
CLDN4-202ENST00000431918 SPHKAPQ2M3C7 1700 aa14.54□□□□□ -0.08
CLDN4-202ENST00000431918 ATAD2Q6PL18 1390 aa14.54□□□□□ -0.08
CLDN4-202ENST00000431918 PIK3C2GO75747 1445 aa14.54□□□□□ -0.08
CLDN4-202ENST00000431918 RWDD1Q9H446 243 aaPredicted RBP14.53□□□□□ -0.08
CLDN4-202ENST00000431918 ABCA9Q8IUA7 1624 aa14.53□□□□□ -0.08
CLDN4-202ENST00000431918 RRS1Q15050 365 aaKnown RBP14.53□□□□□ -0.08
CLDN4-202ENST00000431918 FAM161AQ3B820 660 aa14.52□□□□□ -0.08
CLDN4-202ENST00000431918 BACH2Q9BYV9 841 aa14.52□□□□□ -0.08
CLDN4-202ENST00000431918 BLMP54132 1417 aaPredicted RBP14.52□□□□□ -0.08
CLDN4-202ENST00000431918 FYB1O15117 783 aa14.52□□□□□ -0.08
CLDN4-202ENST00000431918 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.09
CLDN4-202ENST00000431918 THUMPD2Q9BTF0 503 aaKnown RBP14.52□□□□□ -0.09
CLDN4-202ENST00000431918 NME9Q86XW9 330 aa14.51□□□□□ -0.09
CLDN4-202ENST00000431918 MADDQ8WXG6 1647 aa14.51□□□□□ -0.09
CLDN4-202ENST00000431918 NKTRP30414 1462 aaKnown RBP14.51□□□□□ -0.09
CLDN4-202ENST00000431918 MLH3Q9UHC1 1453 aa14.51□□□□□ -0.09
CLDN4-202ENST00000431918 EFCAB6Q5THR3 1501 aa14.51□□□□□ -0.09
CLDN4-202ENST00000431918 IPO8O15397 1037 aaKnown RBP14.51□□□□□ -0.09
CLDN4-202ENST00000431918 TMPOP42166 694 aaKnown RBP14.51□□□□□ -0.09
CLDN4-202ENST00000431918 DZIP1LQ8IYY4 767 aaKnown RBP14.51□□□□□ -0.09
CLDN4-202ENST00000431918 GLIPR1L2Q4G1C9 344 aa14.51□□□□□ -0.09
CLDN4-202ENST00000431918 LTV1Q96GA3 475 aaPredicted RBP14.51□□□□□ -0.09
CLDN4-202ENST00000431918 KIF1BO60333 1816 aa14.5□□□□□ -0.09
CLDN4-202ENST00000431918 ANKRD36BQ8N2N9 1353 aa14.5□□□□□ -0.09
CLDN4-202ENST00000431918 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
CLDN4-202ENST00000431918 WDR63Q8IWG1 891 aa14.5□□□□□ -0.09
CLDN4-202ENST00000431918 TNNQ9UQP3 1299 aa14.5□□□□□ -0.09
CLDN4-202ENST00000431918 EMILIN1Q9Y6C2 1016 aa14.5□□□□□ -0.09
CLDN4-202ENST00000431918 RARSP54136 660 aaKnown RBP14.49□□□□□ -0.09
CLDN4-202ENST00000431918 NUDT16Q96DE0 195 aaKnown RBP14.49□□□□□ -0.09
CLDN4-202ENST00000431918 NEO1Q92859 1461 aa14.49□□□□□ -0.09
CLDN4-202ENST00000431918 A0A1W2PP64 1363 aa14.49□□□□□ -0.09
CLDN4-202ENST00000431918 NUTM2GQ5VZR2 741 aa14.49□□□□□ -0.09
CLDN4-202ENST00000431918 PDE3AQ14432 1141 aa14.49□□□□□ -0.09
CLDN4-202ENST00000431918 SPRYD3Q8NCJ5 442 aa14.49□□□□□ -0.09
CLDN4-202ENST00000431918 APBB1O00213 710 aa14.48□□□□□ -0.09
CLDN4-202ENST00000431918 ZRANB1Q9UGI0 708 aa14.48□□□□□ -0.09
CLDN4-202ENST00000431918 POLR3AO14802 1390 aaPredicted RBP14.48□□□□□ -0.09
CLDN4-202ENST00000431918 NPC1L1Q9UHC9 1359 aa14.48□□□□□ -0.09
CLDN4-202ENST00000431918 ZMYM4Q5VZL5 1548 aa14.48□□□□□ -0.09
CLDN4-202ENST00000431918 KDM5AP29375 1690 aaKnown RBP14.48□□□□□ -0.09
CLDN4-202ENST00000431918 MYOM2P54296 1465 aa14.48□□□□□ -0.09
CLDN4-202ENST00000431918 INO80Q9ULG1 1556 aaPredicted RBP14.48□□□□□ -0.09
CLDN4-202ENST00000431918 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
CLDN4-202ENST00000431918 RNF17Q9BXT8 1623 aaKnown RBP14.47□□□□□ -0.09
CLDN4-202ENST00000431918 CEP152O94986 1710 aa14.47□□□□□ -0.09
CLDN4-202ENST00000431918 AMPHP49418 695 aa14.47□□□□□ -0.09
CLDN4-202ENST00000431918 ARXQ96QS3 562 aa14.46□□□□□ -0.09
CLDN4-202ENST00000431918 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
CLDN4-202ENST00000431918 MAP3K4Q9Y6R4 1608 aa14.46□□□□□ -0.09
CLDN4-202ENST00000431918 CALD1Q05682 793 aaKnown RBP14.46□□□□□ -0.1
CLDN4-202ENST00000431918 WASLO00401 505 aaPredicted RBP14.45□□□□□ -0.1
CLDN4-202ENST00000431918 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
CLDN4-202ENST00000431918 BECN1Q14457 450 aa14.45□□□□□ -0.1
CLDN4-202ENST00000431918 RTF1Q92541 710 aaKnown RBP14.45□□□□□ -0.1
CLDN4-202ENST00000431918 KIDINS220Q9ULH0 1771 aa14.45□□□□□ -0.1
CLDN4-202ENST00000431918 ABCC3O15438 1527 aa14.45□□□□□ -0.1
CLDN4-202ENST00000431918 TSPOAP1O95153 1857 aa14.45□□□□□ -0.1
CLDN4-202ENST00000431918 YTHDC2Q9H6S0 1430 aaKnown RBP14.45□□□□□ -0.1
CLDN4-202ENST00000431918 IGHDP01880 384 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms