RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CRBNQ96SW2 442 aa14.36□□□□□ -0.11
PTCH1-208ENST00000430669 TEFQ10587 303 aa14.35□□□□□ -0.11
PTCH1-208ENST00000430669 DZIP1LQ8IYY4 767 aaKnown RBP14.35□□□□□ -0.11
PTCH1-208ENST00000430669 NSD3Q9BZ95 1437 aa14.35□□□□□ -0.11
PTCH1-208ENST00000430669 CDK19Q9BWU1 502 aa14.35□□□□□ -0.11
PTCH1-208ENST00000430669 PLXNC1O60486 1568 aa14.35□□□□□ -0.11
PTCH1-208ENST00000430669 TET3O43151 1660 aa14.35□□□□□ -0.11
PTCH1-208ENST00000430669 MTHFSP49914 203 aa14.34□□□□□ -0.11
PTCH1-208ENST00000430669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTCH1-208ENST00000430669 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
PTCH1-208ENST00000430669 WDR63Q8IWG1 891 aa14.34□□□□□ -0.11
PTCH1-208ENST00000430669 SAMD9LQ8IVG5 1584 aa14.34□□□□□ -0.11
PTCH1-208ENST00000430669 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
PTCH1-208ENST00000430669 PNISRQ8TF01 805 aaKnown RBP14.34□□□□□ -0.11
PTCH1-208ENST00000430669 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
PTCH1-208ENST00000430669 SLC4A10Q6U841 1118 aa14.34□□□□□ -0.11
PTCH1-208ENST00000430669 ST18O60284 1047 aa14.33□□□□□ -0.12
PTCH1-208ENST00000430669 GLIPR1L2Q4G1C9 344 aa14.33□□□□□ -0.12
PTCH1-208ENST00000430669 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
PTCH1-208ENST00000430669 CHMP4CQ96CF2 233 aa14.33□□□□□ -0.12
PTCH1-208ENST00000430669 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
PTCH1-208ENST00000430669 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
PTCH1-208ENST00000430669 LRRFIP1Q32MZ4 808 aaKnown RBP14.33□□□□□ -0.12
PTCH1-208ENST00000430669 UHRF1BP1Q6BDS2 1440 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 TTC37Q6PGP7 1564 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 GAS2L2Q8NHY3 880 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 SYAP1Q96A49 352 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-208ENST00000430669 IQGAP3Q86VI3 1631 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
PTCH1-208ENST00000430669 NEXNQ0ZGT2 675 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 LTV1Q96GA3 475 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-208ENST00000430669 USP35Q9P2H5 1018 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 CLUAP1Q96AJ1 413 aa14.32□□□□□ -0.12
PTCH1-208ENST00000430669 HECW2Q9P2P5 1572 aa14.31□□□□□ -0.12
PTCH1-208ENST00000430669 TRIM6-TRIM34B2RNG4 842 aa14.31□□□□□ -0.12
PTCH1-208ENST00000430669 GOLGA6L4A6NEF3 574 aa14.31□□□□□ -0.12
PTCH1-208ENST00000430669 CEP152O94986 1710 aa14.31□□□□□ -0.12
PTCH1-208ENST00000430669 PTMAP06454 111 aaKnown RBP14.31□□□□□ -0.12
PTCH1-208ENST00000430669 PZPP20742 1482 aa14.31□□□□□ -0.12
PTCH1-208ENST00000430669 TTC5Q8N0Z6 440 aa14.3□□□□□ -0.12
PTCH1-208ENST00000430669 FANCIQ9NVI1 1328 aa14.3□□□□□ -0.12
PTCH1-208ENST00000430669 EVA1CP58658 441 aa14.3□□□□□ -0.12
PTCH1-208ENST00000430669 PDE3AQ14432 1141 aa14.3□□□□□ -0.12
PTCH1-208ENST00000430669 ZNF428Q96B54 188 aa14.3□□□□□ -0.12
PTCH1-208ENST00000430669 NOS1P29475 1434 aa14.3□□□□□ -0.12
PTCH1-208ENST00000430669 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
PTCH1-208ENST00000430669 NRDCO43847 1150 aa14.29□□□□□ -0.12
PTCH1-208ENST00000430669 SETD1BQ9UPS6 1966 aaKnown RBP14.29□□□□□ -0.12
PTCH1-208ENST00000430669 CDK11BP21127 795 aaKnown RBP14.29□□□□□ -0.12
PTCH1-208ENST00000430669 EXOC6Q8TAG9 804 aa14.29□□□□□ -0.12
PTCH1-208ENST00000430669 NKTRP30414 1462 aaKnown RBP14.28□□□□□ -0.12
PTCH1-208ENST00000430669 NEO1Q92859 1461 aa14.28□□□□□ -0.12
PTCH1-208ENST00000430669 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
PTCH1-208ENST00000430669 GORABQ5T7V8 394 aa14.27□□□□□ -0.12
PTCH1-208ENST00000430669 ANKLE2Q86XL3 938 aa14.27□□□□□ -0.12
PTCH1-208ENST00000430669 APBB1O00213 710 aa14.27□□□□□ -0.12
PTCH1-208ENST00000430669 REC8O95072 547 aa14.27□□□□□ -0.12
PTCH1-208ENST00000430669 GGNBP2Q9H3C7 697 aa14.27□□□□□ -0.12
PTCH1-208ENST00000430669 PLIN1O60240 522 aa14.27□□□□□ -0.13
PTCH1-208ENST00000430669 PDE4AP27815 886 aa14.27□□□□□ -0.13
PTCH1-208ENST00000430669 ABCC1P33527 1531 aa14.27□□□□□ -0.13
PTCH1-208ENST00000430669 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
PTCH1-208ENST00000430669 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-208ENST00000430669 KIF3AQ9Y496 699 aa14.26□□□□□ -0.13
PTCH1-208ENST00000430669 ABCC11Q96J66 1382 aa14.26□□□□□ -0.13
PTCH1-208ENST00000430669 ABTB2Q8N961 1025 aa14.26□□□□□ -0.13
PTCH1-208ENST00000430669 TSPYL4Q9UJ04 414 aa14.26□□□□□ -0.13
PTCH1-208ENST00000430669 PHF14O94880 888 aa14.26□□□□□ -0.13
PTCH1-208ENST00000430669 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-208ENST00000430669 COG6Q9Y2V7 657 aa14.26□□□□□ -0.13
PTCH1-208ENST00000430669 HSP90AB4PQ58FF6 505 aa14.25□□□□□ -0.13
PTCH1-208ENST00000430669 TCP11L2Q8N4U5 519 aa14.25□□□□□ -0.13
PTCH1-208ENST00000430669 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
PTCH1-208ENST00000430669 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
PTCH1-208ENST00000430669 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
PTCH1-208ENST00000430669 DDX11L8A8MPP1 907 aa14.24□□□□□ -0.13
PTCH1-208ENST00000430669 C9orf78Q9NZ63 289 aaPredicted RBP14.24□□□□□ -0.13
PTCH1-208ENST00000430669 RUFY2Q8WXA3 655 aa14.24□□□□□ -0.13
PTCH1-208ENST00000430669 BCL2L13Q9BXK5 485 aa14.24□□□□□ -0.13
PTCH1-208ENST00000430669 UNC13BO14795 1591 aa14.24□□□□□ -0.13
PTCH1-208ENST00000430669 ARAP3Q8WWN8 1544 aa14.24□□□□□ -0.13
PTCH1-208ENST00000430669 KDM5CP41229 1560 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 CCDC30Q5VVM6 783 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 RAPGEF4Q8WZA2 1011 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 FCHSD2O94868 740 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 HMOX1P09601 288 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 NLRP6P59044 892 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 CABP1Q9NZU7 370 aa14.23□□□□□ -0.13
PTCH1-208ENST00000430669 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
PTCH1-208ENST00000430669 C14orf93Q9H972 538 aaKnown RBP14.22□□□□□ -0.13
PTCH1-208ENST00000430669 SYNMO15061 1565 aa14.21□□□□□ -0.13
PTCH1-208ENST00000430669 ANKRD36BQ8N2N9 1353 aa14.2□□□□□ -0.14
PTCH1-208ENST00000430669 TRPM2O94759 1503 aa14.2□□□□□ -0.14
PTCH1-208ENST00000430669 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-208ENST00000430669 CCDC34Q96HJ3 373 aa14.2□□□□□ -0.14
PTCH1-208ENST00000430669 COL17A1Q9UMD9 1497 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-208ENST00000430669 PUS7Q96PZ0 661 aaKnown RBP14.2□□□□□ -0.14
PTCH1-208ENST00000430669 ATP6V1DQ9Y5K8 247 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms