RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 RALGAPBQ86X10 1494 aa35.86■■■■□ 3.33
CPNE1-212ENST00000430570 ARHGEF28Q8N1W1 1705 aaKnown RBP35.85■■■■□ 3.33
CPNE1-212ENST00000430570 ATF3P18847 181 aa35.84■■■■□ 3.33
CPNE1-212ENST00000430570 PIP4K2BP78356 416 aa35.84■■■■□ 3.33
CPNE1-212ENST00000430570 GPRASP1Q5JY77 1395 aa35.84■■■■□ 3.33
CPNE1-212ENST00000430570 CADPS2Q86UW7 1296 aa35.83■■■■□ 3.33
CPNE1-212ENST00000430570 DCCP43146 1447 aa35.81■■■■□ 3.32
CPNE1-212ENST00000430570 ILDR1Q86SU0 546 aaPredicted RBP35.8■■■■□ 3.32
CPNE1-212ENST00000430570 CARD11Q9BXL7 1154 aa35.8■■■■□ 3.32
CPNE1-212ENST00000430570 SCAF1Q9H7N4 1312 aaKnown RBP35.79■■■■□ 3.32
CPNE1-212ENST00000430570 SLAIN2Q9P270 581 aa35.79■■■■□ 3.32
CPNE1-212ENST00000430570 MINK1Q8N4C8 1332 aaPredicted RBP35.75■■■■□ 3.31
CPNE1-212ENST00000430570 HIRIP3Q9BW71 556 aaPredicted RBP35.74■■■■□ 3.31
CPNE1-212ENST00000430570 MST1RQ04912 1400 aa35.73■■■■□ 3.31
CPNE1-212ENST00000430570 CDC42BPGQ6DT37 1551 aa35.72■■■■□ 3.31
CPNE1-212ENST00000430570 CENPJQ9HC77 1338 aaPredicted RBP35.7■■■■□ 3.31
CPNE1-212ENST00000430570 NUTM2FA1L443 756 aa35.67■■■■□ 3.3
CPNE1-212ENST00000430570 ADGRB2O60241 1585 aa35.65■■■■□ 3.3
CPNE1-212ENST00000430570 C1orf167Q5SNV9 1468 aa35.65■■■■□ 3.3
CPNE1-212ENST00000430570 ROBO1Q9Y6N7 1651 aa35.64■■■■□ 3.3
CPNE1-212ENST00000430570 FMN2Q9NZ56 1722 aa35.63■■■■□ 3.29
CPNE1-212ENST00000430570 EIF3AQ14152 1382 aaKnown RBP35.62■■■■□ 3.29
CPNE1-212ENST00000430570 WASLO00401 505 aaPredicted RBP35.61■■■■□ 3.29
CPNE1-212ENST00000430570 BRINP3Q76B58 766 aa35.61■■■■□ 3.29
CPNE1-212ENST00000430570 QRICH2Q9H0J4 1663 aa35.61■■■■□ 3.29
CPNE1-212ENST00000430570 ORAI2Q96SN7 254 aa35.6■■■■□ 3.29
CPNE1-212ENST00000430570 HSPA1LP34931 641 aa35.56■■■■□ 3.28
CPNE1-212ENST00000430570 CDK19Q9BWU1 502 aa35.56■■■■□ 3.28
CPNE1-212ENST00000430570 ESCO1Q5FWF5 840 aa35.54■■■■□ 3.28
CPNE1-212ENST00000430570 PRR36Q9H6K5 1346 aa35.53■■■■□ 3.28
CPNE1-212ENST00000430570 RGPD8O14715 1765 aaPredicted RBP35.53■■■■□ 3.28
CPNE1-212ENST00000430570 ST20-MTHFSA0A0A6YYL1 179 aa35.53■■■■□ 3.28
CPNE1-212ENST00000430570 USP47Q96K76 1375 aa35.52■■■■□ 3.28
CPNE1-212ENST00000430570 USP32Q8NFA0 1604 aa35.52■■■■□ 3.28
CPNE1-212ENST00000430570 DDX17Q92841 729 aaKnown RBP35.5■■■■□ 3.27
CPNE1-212ENST00000430570 TULP4Q9NRJ4 1543 aa35.49■■■■□ 3.27
CPNE1-212ENST00000430570 ANKARQ7Z5J8 1434 aa35.48■■■■□ 3.27
CPNE1-212ENST00000430570 CABP2Q9NPB3 220 aa35.46■■■■□ 3.27
CPNE1-212ENST00000430570 SBNO2Q9Y2G9 1366 aa35.45■■■■□ 3.27
CPNE1-212ENST00000430570 NUDT16Q96DE0 195 aaKnown RBP35.45■■■■□ 3.27
CPNE1-212ENST00000430570 TESK2Q96S53 571 aa35.44■■■■□ 3.26
CPNE1-212ENST00000430570 EVC2Q86UK5 1308 aa35.44■■■■□ 3.26
CPNE1-212ENST00000430570 SRPK2P78362 688 aaKnown RBP35.43■■■■□ 3.26
CPNE1-212ENST00000430570 ATP7BP35670 1465 aa35.43■■■■□ 3.26
CPNE1-212ENST00000430570 PHF8Q9UPP1 1060 aa35.42■■■■□ 3.26
CPNE1-212ENST00000430570 AHDC1Q5TGY3 1603 aaPredicted RBP35.42■■■■□ 3.26
CPNE1-212ENST00000430570 PHLPP1O60346 1717 aa35.41■■■■□ 3.26
CPNE1-212ENST00000430570 NHSL1Q5SYE7 1610 aa35.4■■■■□ 3.26
CPNE1-212ENST00000430570 PMFBP1Q8TBY8 1022 aa35.4■■■■□ 3.26
CPNE1-212ENST00000430570 FOXO3O43524 673 aa35.39■■■■□ 3.26
CPNE1-212ENST00000430570 CCDC61Q9Y6R9 512 aa35.35■■■■□ 3.25
CPNE1-212ENST00000430570 EIF4G2P78344 907 aaKnown RBP eCLIP35.34■■■■□ 3.25
CPNE1-212ENST00000430570 COL16A1Q07092 1604 aaPredicted RBP35.34■■■■□ 3.25
CPNE1-212ENST00000430570 KIF1AQ12756 1690 aa35.34■■■■□ 3.25
CPNE1-212ENST00000430570 HSPA5P11021 654 aaKnown RBP35.33■■■■□ 3.25
CPNE1-212ENST00000430570 XPCQ01831 940 aaPredicted RBP35.33■■■■□ 3.25
CPNE1-212ENST00000430570 SOS2Q07890 1332 aaPredicted RBP35.32■■■■□ 3.24
CPNE1-212ENST00000430570 NPHP3Q7Z494 1330 aa35.32■■■■□ 3.24
CPNE1-212ENST00000430570 TOPAZ1Q8N9V7 1692 aa35.31■■■■□ 3.24
CPNE1-212ENST00000430570 ITSN1Q15811 1721 aa35.29■■■■□ 3.24
CPNE1-212ENST00000430570 DISP3Q9P2K9 1392 aa35.27■■■■□ 3.24
CPNE1-212ENST00000430570 PXDNQ92626 1479 aa35.27■■■■□ 3.24
CPNE1-212ENST00000430570 PLEKHG3A1L390 1219 aa35.27■■■■□ 3.24
CPNE1-212ENST00000430570 PPIP5K1Q6PFW1 1433 aa35.27■■■■□ 3.24
CPNE1-212ENST00000430570 KRT28Q7Z3Y7 464 aa35.26■■■■□ 3.23
CPNE1-212ENST00000430570 NGDNQ8NEJ9 315 aaKnown RBP35.26■■■■□ 3.23
CPNE1-212ENST00000430570 CABP1Q9NZU7 370 aa35.26■■■■□ 3.23
CPNE1-212ENST00000430570 SLC24A1O60721 1099 aa35.25■■■■□ 3.23
CPNE1-212ENST00000430570 TMF1P82094 1093 aa35.25■■■■□ 3.23
CPNE1-212ENST00000430570 PSME1Q06323 249 aa35.23■■■■□ 3.23
CPNE1-212ENST00000430570 LRRC59Q96AG4 307 aaKnown RBP35.23■■■■□ 3.23
CPNE1-212ENST00000430570 ACEP12821 1306 aa35.22■■■■□ 3.23
CPNE1-212ENST00000430570 ATAD2Q6PL18 1390 aa35.22■■■■□ 3.23
CPNE1-212ENST00000430570 POLR3AO14802 1390 aaPredicted RBP35.2■■■■□ 3.23
CPNE1-212ENST00000430570 PUS7Q96PZ0 661 aaKnown RBP35.2■■■■□ 3.23
CPNE1-212ENST00000430570 JCADQ9P266 1359 aa35.18■■■■□ 3.22
CPNE1-212ENST00000430570 TMC1Q8TDI8 760 aa35.13■■■■□ 3.21
CPNE1-212ENST00000430570 SLC12A5Q9H2X9 1139 aa35.13■■■■□ 3.21
CPNE1-212ENST00000430570 SPATA31A3Q5VYP0 1347 aa35.13■■■■□ 3.21
CPNE1-212ENST00000430570 PNPLA6Q8IY17 1366 aa35.12■■■■□ 3.21
CPNE1-212ENST00000430570 SBNO1A3KN83 1393 aa35.11■■■■□ 3.21
CPNE1-212ENST00000430570 TRPM3Q9HCF6 1732 aaPredicted RBP35.11■■■■□ 3.21
CPNE1-212ENST00000430570 SHPRHQ149N8 1683 aa35.1■■■■□ 3.21
CPNE1-212ENST00000430570 C11orf95C9JLR9 678 aaPredicted RBP35.08■■■■□ 3.21
CPNE1-212ENST00000430570 ZEB1P37275 1124 aaPredicted RBP35.08■■■■□ 3.21
CPNE1-212ENST00000430570 CDCA8Q53HL2 280 aa35.08■■■■□ 3.21
CPNE1-212ENST00000430570 TNS3Q68CZ2 1445 aa35.07■■■■□ 3.2
CPNE1-212ENST00000430570 PAK3O75914 559 aaPredicted RBP35.06■■■■□ 3.2
CPNE1-212ENST00000430570 CD163L1Q9NR16 1453 aa35.05■■■■□ 3.2
CPNE1-212ENST00000430570 CPSF1Q10570 1443 aaKnown RBP35.05■■■■□ 3.2
CPNE1-212ENST00000430570 LMOD2Q6P5Q4 547 aa35.04■■■■□ 3.2
CPNE1-212ENST00000430570 USP6P35125 1406 aa35.03■■■■□ 3.2
CPNE1-212ENST00000430570 ZNF692Q9BU19 519 aaPredicted RBP35.03■■■■□ 3.2
CPNE1-212ENST00000430570 AKAP12Q02952 1782 aa35.02■■■■□ 3.2
CPNE1-212ENST00000430570 SPATA31A6Q5VVP1 1343 aa35.02■■■■□ 3.2
CPNE1-212ENST00000430570 POLR3GLQ9BT43 218 aa35.02■■■■□ 3.2
CPNE1-212ENST00000430570 ALS2Q96Q42 1657 aa35■■■■□ 3.19
CPNE1-212ENST00000430570 NUTM2BA6NNL0 878 aaPredicted RBP35■■■■□ 3.19
CPNE1-212ENST00000430570 NUTM2EB1AL46 878 aaPredicted RBP35■■■■□ 3.19
CPNE1-212ENST00000430570 NUTM2AQ8IVF1 878 aaPredicted RBP35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms