RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 DCAF11Q8TEB1 546 aa25.66■■□□□ 1.7
NUP50-208ENST00000430547 KDM2AQ9Y2K7 1162 aa25.66■■□□□ 1.7
NUP50-208ENST00000430547 STAC3Q96MF2 364 aa25.63■■□□□ 1.69
NUP50-208ENST00000430547 PLEKHH1Q9ULM0 1364 aa25.62■■□□□ 1.69
NUP50-208ENST00000430547 MEX3CQ5U5Q3 659 aaKnown RBP25.62■■□□□ 1.69
NUP50-208ENST00000430547 LRRC59Q96AG4 307 aaKnown RBP25.62■■□□□ 1.69
NUP50-208ENST00000430547 DDX17Q92841 729 aaKnown RBP25.61■■□□□ 1.69
NUP50-208ENST00000430547 ORAI2Q96SN7 254 aa25.61■■□□□ 1.69
NUP50-208ENST00000430547 FMN2Q9NZ56 1722 aa25.6■■□□□ 1.69
NUP50-208ENST00000430547 LRP6O75581 1613 aa25.59■■□□□ 1.69
NUP50-208ENST00000430547 SIRT1Q96EB6 747 aa25.59■■□□□ 1.69
NUP50-208ENST00000430547 RGS17Q9UGC6 210 aaPredicted RBP25.58■■□□□ 1.69
NUP50-208ENST00000430547 DLC1Q96QB1 1528 aa25.58■■□□□ 1.68
NUP50-208ENST00000430547 ADGRB1O14514 1584 aa25.57■■□□□ 1.68
NUP50-208ENST00000430547 ESCO1Q5FWF5 840 aa25.57■■□□□ 1.68
NUP50-208ENST00000430547 NUTM2FA1L443 756 aa25.55■■□□□ 1.68
NUP50-208ENST00000430547 NUTM2BA6NNL0 878 aaPredicted RBP25.55■■□□□ 1.68
NUP50-208ENST00000430547 NUTM2EB1AL46 878 aaPredicted RBP25.55■■□□□ 1.68
NUP50-208ENST00000430547 NUTM2AQ8IVF1 878 aaPredicted RBP25.55■■□□□ 1.68
NUP50-208ENST00000430547 POGKQ9P215 609 aa25.55■■□□□ 1.68
NUP50-208ENST00000430547 PRAM1Q96QH2 718 aa25.54■■□□□ 1.68
NUP50-208ENST00000430547 KIF1AQ12756 1690 aa25.53■■□□□ 1.68
NUP50-208ENST00000430547 SAFB2Q14151 953 aaKnown RBP eCLIP25.53■■□□□ 1.68
NUP50-208ENST00000430547 NPHP3Q7Z494 1330 aa25.53■■□□□ 1.68
NUP50-208ENST00000430547 RGPD8O14715 1765 aaPredicted RBP25.53■■□□□ 1.68
NUP50-208ENST00000430547 PNPLA6Q8IY17 1366 aa25.53■■□□□ 1.68
NUP50-208ENST00000430547 SOS2Q07890 1332 aaPredicted RBP25.52■■□□□ 1.68
NUP50-208ENST00000430547 TRAK1Q9UPV9 953 aa25.51■■□□□ 1.67
NUP50-208ENST00000430547 KIAA1210Q9ULL0 1709 aa25.49■■□□□ 1.67
NUP50-208ENST00000430547 POTEAQ6S8J7 498 aa25.49■■□□□ 1.67
NUP50-208ENST00000430547 ARHGEF28Q8N1W1 1705 aaKnown RBP25.48■■□□□ 1.67
NUP50-208ENST00000430547 ADGRB2O60241 1585 aa25.48■■□□□ 1.67
NUP50-208ENST00000430547 FOXO3O43524 673 aa25.46■■□□□ 1.67
NUP50-208ENST00000430547 ZNF772Q68DY9 489 aaPredicted RBP25.46■■□□□ 1.67
NUP50-208ENST00000430547 PXDNQ92626 1479 aa25.45■■□□□ 1.66
NUP50-208ENST00000430547 COL22A1Q8NFW1 1626 aaPredicted RBP25.44■■□□□ 1.66
NUP50-208ENST00000430547 XPCQ01831 940 aaPredicted RBP25.42■■□□□ 1.66
NUP50-208ENST00000430547 MINK1Q8N4C8 1332 aaPredicted RBP25.41■■□□□ 1.66
NUP50-208ENST00000430547 EIF3AQ14152 1382 aaKnown RBP25.41■■□□□ 1.66
NUP50-208ENST00000430547 C8orf37Q96NL8 207 aa25.4■■□□□ 1.66
NUP50-208ENST00000430547 HIRIP3Q9BW71 556 aaPredicted RBP25.4■■□□□ 1.66
NUP50-208ENST00000430547 USP32Q8NFA0 1604 aa25.4■■□□□ 1.66
NUP50-208ENST00000430547 ANKARQ7Z5J8 1434 aa25.39■■□□□ 1.66
NUP50-208ENST00000430547 PHF8Q9UPP1 1060 aa25.39■■□□□ 1.66
NUP50-208ENST00000430547 AFF2P51816 1311 aa25.38■■□□□ 1.65
NUP50-208ENST00000430547 ADAMTS2O95450 1211 aa25.38■■□□□ 1.65
NUP50-208ENST00000430547 MARF1Q9Y4F3 1742 aaKnown RBP25.36■■□□□ 1.65
NUP50-208ENST00000430547 TULP4Q9NRJ4 1543 aa25.36■■□□□ 1.65
NUP50-208ENST00000430547 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
NUP50-208ENST00000430547 SIN3AQ96ST3 1273 aa25.35■■□□□ 1.65
NUP50-208ENST00000430547 ITSN1Q15811 1721 aa25.34■■□□□ 1.65
NUP50-208ENST00000430547 NEUROD1Q13562 356 aa25.34■■□□□ 1.65
NUP50-208ENST00000430547 KRT28Q7Z3Y7 464 aa25.34■■□□□ 1.65
NUP50-208ENST00000430547 NGLY1Q96IV0 654 aa25.34■■□□□ 1.65
NUP50-208ENST00000430547 PSME1Q06323 249 aa25.33■■□□□ 1.65
NUP50-208ENST00000430547 WASLO00401 505 aaPredicted RBP25.32■■□□□ 1.64
NUP50-208ENST00000430547 L3MBTL2Q969R5 705 aa25.32■■□□□ 1.64
NUP50-208ENST00000430547 PMFBP1Q8TBY8 1022 aa25.31■■□□□ 1.64
NUP50-208ENST00000430547 SPATA31A3Q5VYP0 1347 aa25.31■■□□□ 1.64
NUP50-208ENST00000430547 TNS3Q68CZ2 1445 aa25.29■■□□□ 1.64
NUP50-208ENST00000430547 RXRBP28702 533 aa25.29■■□□□ 1.64
NUP50-208ENST00000430547 NBPF1Q3BBV0 1214 aa25.29■■□□□ 1.64
NUP50-208ENST00000430547 TRPM1Q7Z4N2 1603 aa25.28■■□□□ 1.64
NUP50-208ENST00000430547 PRR36Q9H6K5 1346 aa25.26■■□□□ 1.63
NUP50-208ENST00000430547 SBNO1A3KN83 1393 aa25.26■■□□□ 1.63
NUP50-208ENST00000430547 HAP1P54257 671 aaPredicted RBP25.25■■□□□ 1.63
NUP50-208ENST00000430547 LMOD2Q6P5Q4 547 aa25.25■■□□□ 1.63
NUP50-208ENST00000430547 QTRT2Q9H974 415 aaKnown RBP25.25■■□□□ 1.63
NUP50-208ENST00000430547 GPRASP1Q5JY77 1395 aa25.25■■□□□ 1.63
NUP50-208ENST00000430547 QRICH2Q9H0J4 1663 aa25.25■■□□□ 1.63
NUP50-208ENST00000430547 ARHGEF10O15013 1369 aa25.24■■□□□ 1.63
NUP50-208ENST00000430547 USP21Q9UK80 565 aa25.24■■□□□ 1.63
NUP50-208ENST00000430547 TRPM3Q9HCF6 1732 aaPredicted RBP25.23■■□□□ 1.63
NUP50-208ENST00000430547 ATP7BP35670 1465 aa25.23■■□□□ 1.63
NUP50-208ENST00000430547 CDK12Q9NYV4 1490 aaPredicted RBP25.22■■□□□ 1.63
NUP50-208ENST00000430547 NGDNQ8NEJ9 315 aaKnown RBP25.22■■□□□ 1.63
NUP50-208ENST00000430547 ABCA3Q99758 1704 aa25.22■■□□□ 1.63
NUP50-208ENST00000430547 CENPJQ9HC77 1338 aaPredicted RBP25.21■■□□□ 1.63
NUP50-208ENST00000430547 CDK19Q9BWU1 502 aa25.21■■□□□ 1.63
NUP50-208ENST00000430547 TOPAZ1Q8N9V7 1692 aa25.2■■□□□ 1.63
NUP50-208ENST00000430547 PLEKHG5O94827 1062 aa25.2■■□□□ 1.62
NUP50-208ENST00000430547 RBM6P78332 1123 aaKnown RBP25.2■■□□□ 1.62
NUP50-208ENST00000430547 NUDT16Q96DE0 195 aaKnown RBP25.2■■□□□ 1.62
NUP50-208ENST00000430547 ROCK2O75116 1388 aaKnown RBP25.19■■□□□ 1.62
NUP50-208ENST00000430547 FNBP4Q8N3X1 1017 aaPredicted RBP25.19■■□□□ 1.62
NUP50-208ENST00000430547 TRPC5Q9UL62 973 aaPredicted RBP25.19■■□□□ 1.62
NUP50-208ENST00000430547 ALS2Q96Q42 1657 aa25.19■■□□□ 1.62
NUP50-208ENST00000430547 TONSLQ96HA7 1378 aa25.18■■□□□ 1.62
NUP50-208ENST00000430547 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.17■■□□□ 1.62
NUP50-208ENST00000430547 PAK3O75914 559 aaPredicted RBP25.14■■□□□ 1.62
NUP50-208ENST00000430547 SRPK2P78362 688 aaKnown RBP25.14■■□□□ 1.62
NUP50-208ENST00000430547 CABLES1Q8TDN4 633 aa25.14■■□□□ 1.62
NUP50-208ENST00000430547 PLCH1Q4KWH8 1693 aa25.13■■□□□ 1.61
NUP50-208ENST00000430547 CCDC61Q9Y6R9 512 aa25.13■■□□□ 1.61
NUP50-208ENST00000430547 RGS12O14924 1447 aa25.12■■□□□ 1.61
NUP50-208ENST00000430547 ATRNO75882 1429 aa25.12■■□□□ 1.61
NUP50-208ENST00000430547 BCL9LQ86UU0 1499 aa25.12■■□□□ 1.61
NUP50-208ENST00000430547 NWD2Q9ULI1 1742 aa25.11■■□□□ 1.61
NUP50-208ENST00000430547 SLIT2O94813 1529 aa25.09■■□□□ 1.61
NUP50-208ENST00000430547 CRYBG1Q9Y4K1 1723 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms