RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 PLCB2Q00722 1185 aa17.17■□□□□ 0.34
SGMS1-203ENST00000429490 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
SGMS1-203ENST00000429490 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
SGMS1-203ENST00000429490 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
SGMS1-203ENST00000429490 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
SGMS1-203ENST00000429490 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-203ENST00000429490 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-203ENST00000429490 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
SGMS1-203ENST00000429490 ADGRL2O95490 1459 aa17.15■□□□□ 0.34
SGMS1-203ENST00000429490 DNTTIP2Q5QJE6 756 aaKnown RBP17.15■□□□□ 0.34
SGMS1-203ENST00000429490 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
SGMS1-203ENST00000429490 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
SGMS1-203ENST00000429490 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
SGMS1-203ENST00000429490 TERF2IPQ9NYB0 399 aa17.13■□□□□ 0.33
SGMS1-203ENST00000429490 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
SGMS1-203ENST00000429490 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
SGMS1-203ENST00000429490 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.338e-7■■■■■ 41.4
SGMS1-203ENST00000429490 MRE11P49959 708 aa17.13■□□□□ 0.33
SGMS1-203ENST00000429490 ZMYM4Q5VZL5 1548 aa17.13■□□□□ 0.33
SGMS1-203ENST00000429490 CASC1Q6TDU7 716 aa17.13■□□□□ 0.33
SGMS1-203ENST00000429490 NUTM2FA1L443 756 aa17.12■□□□□ 0.33
SGMS1-203ENST00000429490 TRIM27P14373 513 aa17.12■□□□□ 0.33
SGMS1-203ENST00000429490 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
SGMS1-203ENST00000429490 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
SGMS1-203ENST00000429490 MLECQ14165 292 aa17.11■□□□□ 0.33
SGMS1-203ENST00000429490 MAGI2Q86UL8 1455 aa17.11■□□□□ 0.33
SGMS1-203ENST00000429490 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
SGMS1-203ENST00000429490 FBLN1P23142 703 aa17.11■□□□□ 0.33
SGMS1-203ENST00000429490 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
SGMS1-203ENST00000429490 RRAGDQ9NQL2 400 aaPredicted RBP17.11■□□□□ 0.33
SGMS1-203ENST00000429490 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
SGMS1-203ENST00000429490 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
SGMS1-203ENST00000429490 SCAF11Q99590 1463 aaKnown RBP17.1■□□□□ 0.33
SGMS1-203ENST00000429490 CHMP4BQ9H444 224 aaKnown RBP17.09■□□□□ 0.33
SGMS1-203ENST00000429490 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
SGMS1-203ENST00000429490 MCTP1Q6DN14 999 aa17.08■□□□□ 0.33
SGMS1-203ENST00000429490 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
SGMS1-203ENST00000429490 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
SGMS1-203ENST00000429490 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
SGMS1-203ENST00000429490 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
SGMS1-203ENST00000429490 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
SGMS1-203ENST00000429490 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
SGMS1-203ENST00000429490 AAMPQ13685 434 aa17.06■□□□□ 0.32
SGMS1-203ENST00000429490 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
SGMS1-203ENST00000429490 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
SGMS1-203ENST00000429490 GPRASP1Q5JY77 1395 aa17.06■□□□□ 0.32
SGMS1-203ENST00000429490 CHD1LQ86WJ1 897 aa17.05■□□□□ 0.32
SGMS1-203ENST00000429490 ESPNB1AK53 854 aa17.05■□□□□ 0.32
SGMS1-203ENST00000429490 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
SGMS1-203ENST00000429490 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
SGMS1-203ENST00000429490 CAVIN1Q6NZI2 390 aaKnown RBP17.04■□□□□ 0.32
SGMS1-203ENST00000429490 TNPO1Q92973 898 aaKnown RBP17.04■□□□□ 0.32
SGMS1-203ENST00000429490 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
SGMS1-203ENST00000429490 MPNDQ8N594 471 aa17.02■□□□□ 0.32
SGMS1-203ENST00000429490 PLA2R1Q13018 1463 aa17.02■□□□□ 0.32
SGMS1-203ENST00000429490 USP19O94966 1318 aa17.02■□□□□ 0.31
SGMS1-203ENST00000429490 RNF214Q8ND24 703 aa17.02■□□□□ 0.31
SGMS1-203ENST00000429490 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
SGMS1-203ENST00000429490 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
SGMS1-203ENST00000429490 PIK3C2GO75747 1445 aa17.01■□□□□ 0.31
SGMS1-203ENST00000429490 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
SGMS1-203ENST00000429490 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
SGMS1-203ENST00000429490 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
SGMS1-203ENST00000429490 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
SGMS1-203ENST00000429490 FAM13BQ9NYF5 915 aa17■□□□□ 0.31
SGMS1-203ENST00000429490 TRAPPC8Q9Y2L5 1435 aa17■□□□□ 0.31
SGMS1-203ENST00000429490 SSFA2P28290 1259 aa17■□□□□ 0.31
SGMS1-203ENST00000429490 NECTIN2Q92692 538 aa17■□□□□ 0.31
SGMS1-203ENST00000429490 CABP1Q9NZU7 370 aa17■□□□□ 0.31
SGMS1-203ENST00000429490 ST18O60284 1047 aa16.98■□□□□ 0.31
SGMS1-203ENST00000429490 RBM10P98175 930 aaKnown RBP16.98■□□□□ 0.31
SGMS1-203ENST00000429490 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
SGMS1-203ENST00000429490 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
SGMS1-203ENST00000429490 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
SGMS1-203ENST00000429490 K7ELQ4 463 aaPredicted RBP16.97■□□□□ 0.31
SGMS1-203ENST00000429490 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
SGMS1-203ENST00000429490 NOS1P29475 1434 aa16.97■□□□□ 0.31
SGMS1-203ENST00000429490 PRPF40AO75400 957 aaKnown RBP16.97■□□□□ 0.31
SGMS1-203ENST00000429490 CDC45O75419 566 aa16.96■□□□□ 0.31
SGMS1-203ENST00000429490 NUP160Q12769 1436 aa16.96■□□□□ 0.31
SGMS1-203ENST00000429490 TWISTNBQ3B726 338 aaPredicted RBP16.96■□□□□ 0.31
SGMS1-203ENST00000429490 R3HCC1Q9Y3T6 440 aaKnown RBP16.96■□□□□ 0.31
SGMS1-203ENST00000429490 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
SGMS1-203ENST00000429490 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
SGMS1-203ENST00000429490 PTMSP20962 102 aa16.95■□□□□ 0.3
SGMS1-203ENST00000429490 POLR3AO14802 1390 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-203ENST00000429490 TBC1D9Q6ZT07 1266 aa16.94■□□□□ 0.3
SGMS1-203ENST00000429490 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
SGMS1-203ENST00000429490 GNAI1P63096 354 aa16.93■□□□□ 0.3
SGMS1-203ENST00000429490 SMARCA5O60264 1052 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-203ENST00000429490 UBE2Q2Q8WVN8 375 aa16.93■□□□□ 0.3
SGMS1-203ENST00000429490 RTF1Q92541 710 aaKnown RBP16.93■□□□□ 0.3
SGMS1-203ENST00000429490 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
SGMS1-203ENST00000429490 RAPGEF3O95398 923 aa16.92■□□□□ 0.3
SGMS1-203ENST00000429490 ANTXR1Q9H6X2 564 aa16.92■□□□□ 0.3
SGMS1-203ENST00000429490 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
SGMS1-203ENST00000429490 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
SGMS1-203ENST00000429490 RRS1Q15050 365 aaKnown RBP16.91■□□□□ 0.3
SGMS1-203ENST00000429490 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
SGMS1-203ENST00000429490 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms