RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 LAMC1P11047 1609 aa19.58■□□□□ 0.72
HLA-F-219ENST00000429294 FOXD1Q16676 465 aa19.57■□□□□ 0.72
HLA-F-219ENST00000429294 TRPC5Q9UL62 973 aaPredicted RBP19.57■□□□□ 0.72
HLA-F-219ENST00000429294 RGS12O14924 1447 aa19.56■□□□□ 0.72
HLA-F-219ENST00000429294 ANKRD30BQ9BXX2 1392 aa19.56■□□□□ 0.72
HLA-F-219ENST00000429294 STK26Q9P289 416 aa19.55■□□□□ 0.72
HLA-F-219ENST00000429294 LRPPRCP42704 1394 aaKnown RBP19.55■□□□□ 0.72
HLA-F-219ENST00000429294 ADGRF5Q8IZF2 1346 aa19.53■□□□□ 0.72
HLA-F-219ENST00000429294 FOXO3O43524 673 aa19.53■□□□□ 0.72
HLA-F-219ENST00000429294 FNBP4Q8N3X1 1017 aaPredicted RBP19.53■□□□□ 0.72
HLA-F-219ENST00000429294 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
HLA-F-219ENST00000429294 MPHOSPH9Q99550 1183 aa19.52■□□□□ 0.72
HLA-F-219ENST00000429294 ATAD2Q6PL18 1390 aa19.52■□□□□ 0.72
HLA-F-219ENST00000429294 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
HLA-F-219ENST00000429294 WAPLQ7Z5K2 1190 aa19.5■□□□□ 0.71
HLA-F-219ENST00000429294 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
HLA-F-219ENST00000429294 NUTM2FA1L443 756 aa19.49■□□□□ 0.71
HLA-F-219ENST00000429294 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
HLA-F-219ENST00000429294 TECPR2O15040 1411 aa19.49■□□□□ 0.71
HLA-F-219ENST00000429294 TMEM132EQ6IEE7 984 aa19.48■□□□□ 0.71
HLA-F-219ENST00000429294 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
HLA-F-219ENST00000429294 COL22A1Q8NFW1 1626 aaPredicted RBP19.47■□□□□ 0.71
HLA-F-219ENST00000429294 MYOM2P54296 1465 aa19.47■□□□□ 0.71
HLA-F-219ENST00000429294 PXDNQ92626 1479 aa19.46■□□□□ 0.71
HLA-F-219ENST00000429294 ATRNO75882 1429 aa19.45■□□□□ 0.7
HLA-F-219ENST00000429294 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
HLA-F-219ENST00000429294 YTHDC2Q9H6S0 1430 aaKnown RBP19.43■□□□□ 0.7
HLA-F-219ENST00000429294 SIRT1Q96EB6 747 aa19.43■□□□□ 0.7
HLA-F-219ENST00000429294 HAP1P54257 671 aaPredicted RBP19.42■□□□□ 0.7
HLA-F-219ENST00000429294 GJD4Q96KN9 370 aaPredicted RBP19.42■□□□□ 0.7
HLA-F-219ENST00000429294 PLEKHH1Q9ULM0 1364 aa19.42■□□□□ 0.7
HLA-F-219ENST00000429294 PSME1Q06323 249 aa19.41■□□□□ 0.7
HLA-F-219ENST00000429294 CCDC125Q86Z20 511 aa19.41■□□□□ 0.7
HLA-F-219ENST00000429294 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
HLA-F-219ENST00000429294 BCL9LQ86UU0 1499 aa19.41■□□□□ 0.7
HLA-F-219ENST00000429294 KNDC1Q76NI1 1749 aa19.4■□□□□ 0.7
HLA-F-219ENST00000429294 IFT172Q9UG01 1749 aa19.4■□□□□ 0.7
HLA-F-219ENST00000429294 KRT28Q7Z3Y7 464 aa19.4■□□□□ 0.7
HLA-F-219ENST00000429294 C14orf93Q9H972 538 aaKnown RBP19.4■□□□□ 0.7
HLA-F-219ENST00000429294 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
HLA-F-219ENST00000429294 KIF1AQ12756 1690 aa19.38■□□□□ 0.69
HLA-F-219ENST00000429294 UNC5CLQ8IV45 518 aa19.38■□□□□ 0.69
HLA-F-219ENST00000429294 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
HLA-F-219ENST00000429294 PHF8Q9UPP1 1060 aa19.38■□□□□ 0.69
HLA-F-219ENST00000429294 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
HLA-F-219ENST00000429294 SRCAPQ6ZRS2 3230 aa19.37■□□□□ 0.69
HLA-F-219ENST00000429294 FMN2Q9NZ56 1722 aa19.37■□□□□ 0.69
HLA-F-219ENST00000429294 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
HLA-F-219ENST00000429294 POGKQ9P215 609 aa19.36■□□□□ 0.69
HLA-F-219ENST00000429294 EP400Q96L91 3159 aa19.36■□□□□ 0.69
HLA-F-219ENST00000429294 LMOD2Q6P5Q4 547 aa19.35■□□□□ 0.69
HLA-F-219ENST00000429294 SAFB2Q14151 953 aaKnown RBP eCLIP19.34■□□□□ 0.69
HLA-F-219ENST00000429294 PRAM1Q96QH2 718 aa19.34■□□□□ 0.69
HLA-F-219ENST00000429294 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.68
HLA-F-219ENST00000429294 SLIT2O94813 1529 aa19.32■□□□□ 0.68
HLA-F-219ENST00000429294 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.31■□□□□ 0.68
HLA-F-219ENST00000429294 NRXN1Q9ULB1 1477 aa19.31■□□□□ 0.68
HLA-F-219ENST00000429294 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
HLA-F-219ENST00000429294 SBNO1A3KN83 1393 aa19.31■□□□□ 0.68
HLA-F-219ENST00000429294 ARHGEF10O15013 1369 aa19.31■□□□□ 0.68
HLA-F-219ENST00000429294 RALGAPBQ86X10 1494 aa19.3■□□□□ 0.68
HLA-F-219ENST00000429294 CCDC9Q9Y3X0 531 aaKnown RBP19.3■□□□□ 0.68
HLA-F-219ENST00000429294 SF3B2Q13435 895 aaKnown RBP19.29■□□□□ 0.68
HLA-F-219ENST00000429294 CABLES1Q8TDN4 633 aa19.29■□□□□ 0.68
HLA-F-219ENST00000429294 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
HLA-F-219ENST00000429294 VPS72Q15906 364 aa19.28■□□□□ 0.68
HLA-F-219ENST00000429294 RGPD8O14715 1765 aaPredicted RBP19.27■□□□□ 0.68
HLA-F-219ENST00000429294 PMFBP1Q8TBY8 1022 aa19.27■□□□□ 0.68
HLA-F-219ENST00000429294 ANKARQ7Z5J8 1434 aa19.26■□□□□ 0.67
HLA-F-219ENST00000429294 SEPT12Q8IYM1 358 aa19.26■□□□□ 0.67
HLA-F-219ENST00000429294 EIF3AQ14152 1382 aaKnown RBP19.26■□□□□ 0.67
HLA-F-219ENST00000429294 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
HLA-F-219ENST00000429294 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
HLA-F-219ENST00000429294 GLI3P10071 1580 aa19.25■□□□□ 0.67
HLA-F-219ENST00000429294 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
HLA-F-219ENST00000429294 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
HLA-F-219ENST00000429294 TRAK1Q9UPV9 953 aa19.25■□□□□ 0.67
HLA-F-219ENST00000429294 STAC3Q96MF2 364 aa19.24■□□□□ 0.67
HLA-F-219ENST00000429294 KDM2AQ9Y2K7 1162 aa19.24■□□□□ 0.67
HLA-F-219ENST00000429294 A0A0G2JS52 829 aa19.23■□□□□ 0.67
HLA-F-219ENST00000429294 MYT1Q01538 1121 aa19.23■□□□□ 0.67
HLA-F-219ENST00000429294 HIRIP3Q9BW71 556 aaPredicted RBP19.23■□□□□ 0.67
HLA-F-219ENST00000429294 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
HLA-F-219ENST00000429294 MINK1Q8N4C8 1332 aaPredicted RBP19.22■□□□□ 0.67
HLA-F-219ENST00000429294 FAM83GA6ND36 823 aa19.21■□□□□ 0.67
HLA-F-219ENST00000429294 ONECUT3O60422 494 aaPredicted RBP19.21■□□□□ 0.67
HLA-F-219ENST00000429294 KRT27Q7Z3Y8 459 aa19.21■□□□□ 0.67
HLA-F-219ENST00000429294 NWD2Q9ULI1 1742 aa19.21■□□□□ 0.67
HLA-F-219ENST00000429294 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
HLA-F-219ENST00000429294 WASLO00401 505 aaPredicted RBP19.19■□□□□ 0.66
HLA-F-219ENST00000429294 ADGRB2O60241 1585 aa19.19■□□□□ 0.66
HLA-F-219ENST00000429294 PLCH1Q4KWH8 1693 aa19.18■□□□□ 0.66
HLA-F-219ENST00000429294 DEFB132Q7Z7B7 95 aa19.18■□□□□ 0.66
HLA-F-219ENST00000429294 BTG4Q9NY30 223 aa19.18■□□□□ 0.66
HLA-F-219ENST00000429294 ADGRB1O14514 1584 aa19.18■□□□□ 0.66
HLA-F-219ENST00000429294 BRWD3Q6RI45 1802 aa19.17■□□□□ 0.66
HLA-F-219ENST00000429294 PAK3O75914 559 aaPredicted RBP19.17■□□□□ 0.66
HLA-F-219ENST00000429294 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
HLA-F-219ENST00000429294 TULP4Q9NRJ4 1543 aa19.15■□□□□ 0.66
HLA-F-219ENST00000429294 ABCA3Q99758 1704 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms