RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 TCP11L2Q8N4U5 519 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 CHMP4BQ9H444 224 aaKnown RBP6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 PPP6R1Q9UPN7 881 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 INO80Q9ULG1 1556 aaPredicted RBP6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 NPATQ14207 1427 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 MADDQ8WXG6 1647 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 E9PCH4 1651 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 PDE3AQ14432 1141 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 WDR63Q8IWG1 891 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 PRAM1Q96QH2 718 aa6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 POLR3AO14802 1390 aaPredicted RBP6.92□□□□□ -1.3
ATP13A3-202ENST00000429136 IPO8O15397 1037 aaKnown RBP6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 RWDD1Q9H446 243 aaPredicted RBP6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 NKTRP30414 1462 aaKnown RBP6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 BECN1Q14457 450 aa6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 DIAPH1O60610 1272 aaKnown RBP6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 FAM161AQ3B820 660 aa6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 GGNBP2Q9H3C7 697 aa6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 KDM5AP29375 1690 aaKnown RBP6.91□□□□□ -1.3
ATP13A3-202ENST00000429136 CARD14Q9BXL6 1004 aa6.9□□□□□ -1.3
ATP13A3-202ENST00000429136 LMTK2Q8IWU2 1503 aa6.9□□□□□ -1.3
ATP13A3-202ENST00000429136 WWC1Q8IX03 1113 aa6.9□□□□□ -1.3
ATP13A3-202ENST00000429136 SMC4Q9NTJ3 1288 aa6.9□□□□□ -1.3
ATP13A3-202ENST00000429136 ANKRD36BQ8N2N9 1353 aa6.9□□□□□ -1.3
ATP13A3-202ENST00000429136 PLEKHH1Q9ULM0 1364 aa6.9□□□□□ -1.3
ATP13A3-202ENST00000429136 HECW2Q9P2P5 1572 aa6.9□□□□□ -1.3
ATP13A3-202ENST00000429136 LAS1LQ9Y4W2 734 aaKnown RBP6.9□□□□□ -1.31
ATP13A3-202ENST00000429136 ERVK-7P63135 1459 aa6.9□□□□□ -1.31
ATP13A3-202ENST00000429136 UGGT1Q9NYU2 1555 aa6.9□□□□□ -1.31
ATP13A3-202ENST00000429136 MAP3K4Q9Y6R4 1608 aa6.9□□□□□ -1.31
ATP13A3-202ENST00000429136 KIF1BO60333 1816 aa6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 ZKSCAN2Q63HK3 967 aa6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.316e-9■■■□□ 17
ATP13A3-202ENST00000429136 CLUAP1Q96AJ1 413 aa6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 MSH5O43196 834 aa6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 CT47B1P0C2W7 299 aaPredicted RBP6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 HAP1P54257 671 aaPredicted RBP6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 LMOD3Q0VAK6 560 aa6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
ATP13A3-202ENST00000429136 CEP152O94986 1710 aa6.88□□□□□ -1.31
ATP13A3-202ENST00000429136 PLPPR3Q6T4P5 718 aa6.88□□□□□ -1.31
ATP13A3-202ENST00000429136 CDK19Q9BWU1 502 aa6.88□□□□□ -1.31
ATP13A3-202ENST00000429136 NEURL4Q96JN8 1562 aa6.88□□□□□ -1.31
ATP13A3-202ENST00000429136 BCAR3O75815 825 aa6.88□□□□□ -1.31
ATP13A3-202ENST00000429136 C20orf194Q5TEA3 1177 aa6.88□□□□□ -1.31
ATP13A3-202ENST00000429136 DEPDC5O75140 1603 aa6.88□□□□□ -1.31
ATP13A3-202ENST00000429136 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 COG3Q96JB2 828 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 BCL2L13Q9BXK5 485 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 EID1Q9Y6B2 187 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 ABCC3O15438 1527 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 RIPK4P57078 832 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 FBXO31Q5XUX0 539 aaPredicted RBP6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 ITPRIPQ8IWB1 547 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 ADGRB3O60242 1522 aa6.87□□□□□ -1.31
ATP13A3-202ENST00000429136 KIAA1210Q9ULL0 1709 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 DZIP1LQ8IYY4 767 aaKnown RBP6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 CABP1Q9NZU7 370 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 ABCC11Q96J66 1382 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 IQGAP1P46940 1657 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 ARHGAP31Q2M1Z3 1444 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 CCDC27Q2M243 656 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 KIF16BQ96L93 1317 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 EIF5BO60841 1220 aaKnown RBP6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 DDX19BQ9UMR2 479 aa6.86□□□□□ -1.31
ATP13A3-202ENST00000429136 ABCA6Q8N139 1617 aa6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 SETBP1Q9Y6X0 1596 aa6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 ZNF521Q96K83 1311 aa6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 KIDINS220Q9ULH0 1771 aa6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 PPRC1Q5VV67 1664 aaKnown RBP6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 RARSP54136 660 aaKnown RBP6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 NCBP3Q53F19 620 aaKnown RBP6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
ATP13A3-202ENST00000429136 DEKP35659 375 aaKnown RBP6.84□□□□□ -1.31
ATP13A3-202ENST00000429136 TMPOP42166 694 aaKnown RBP6.84□□□□□ -1.31
ATP13A3-202ENST00000429136 FCHSD2O94868 740 aa6.84□□□□□ -1.31
ATP13A3-202ENST00000429136 YTHDC2Q9H6S0 1430 aaKnown RBP6.84□□□□□ -1.31
ATP13A3-202ENST00000429136 YEATS2Q9ULM3 1422 aa6.84□□□□□ -1.31
ATP13A3-202ENST00000429136 ZFYVE9O95405 1425 aa6.84□□□□□ -1.32
ATP13A3-202ENST00000429136 EXOSC9Q06265 439 aaKnown RBP6.84□□□□□ -1.32
ATP13A3-202ENST00000429136 GNAI1P63096 354 aa6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 ZNF692Q9BU19 519 aaPredicted RBP6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 NRXN1Q9ULB1 1477 aa6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 A0A1W2PP64 1363 aa6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 PAK3O75914 559 aaPredicted RBP6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 PRKAR2BP31323 418 aa6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 TXNDC2Q86VQ3 553 aa6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 TRMT2AQ8IZ69 625 aaKnown RBP6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 ZNF428Q96B54 188 aa6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 CCDC61Q9Y6R9 512 aa6.83□□□□□ -1.32
ATP13A3-202ENST00000429136 IL16Q14005 1332 aa6.82□□□□□ -1.32
ATP13A3-202ENST00000429136 RIMS2Q9UQ26 1411 aa6.82□□□□□ -1.32
ATP13A3-202ENST00000429136 FYB1O15117 783 aa6.82□□□□□ -1.32
ATP13A3-202ENST00000429136 CFAP65Q6ZU64 1925 aaKnown RBP6.82□□□□□ -1.32
ATP13A3-202ENST00000429136 MVPQ14764 893 aaKnown RBP6.82□□□□□ -1.32
ATP13A3-202ENST00000429136 WAPLQ7Z5K2 1190 aa6.82□□□□□ -1.32
ATP13A3-202ENST00000429136 TSR2Q969E8 191 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms