RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
C4A-243ENST00000428956 SASS6Q6UVJ0 657 aa19.11■□□□□ 0.65
C4A-243ENST00000428956 CCDC39Q9UFE4 941 aa19.11■□□□□ 0.65
C4A-243ENST00000428956 GTF2E1P29083 439 aaPredicted RBP19.11■□□□□ 0.65
C4A-243ENST00000428956 CCDC47Q96A33 483 aaKnown RBP19.11■□□□□ 0.65
C4A-243ENST00000428956 CFTRP13569 1480 aa19.1■□□□□ 0.65
C4A-243ENST00000428956 TRDNQ13061 729 aa19.1■□□□□ 0.65
C4A-243ENST00000428956 FOXD4L6Q3SYB3 417 aaPredicted RBP19.1■□□□□ 0.65
C4A-243ENST00000428956 FOXD4L3Q6VB84 417 aaPredicted RBP19.1■□□□□ 0.65
C4A-243ENST00000428956 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.1■□□□□ 0.65
C4A-243ENST00000428956 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
C4A-243ENST00000428956 GNAI3P08754 354 aa19.1■□□□□ 0.65
C4A-243ENST00000428956 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
C4A-243ENST00000428956 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
C4A-243ENST00000428956 IPO7O95373 1038 aaKnown RBP19.09■□□□□ 0.65
C4A-243ENST00000428956 MTHFSP49914 203 aa19.09■□□□□ 0.65
C4A-243ENST00000428956 RABEP1Q15276 862 aa19.09■□□□□ 0.65
C4A-243ENST00000428956 CCDC73Q6ZRK6 1079 aa19.08■□□□□ 0.65
C4A-243ENST00000428956 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.65
C4A-243ENST00000428956 TOP2BQ02880 1626 aa19.08■□□□□ 0.65
C4A-243ENST00000428956 PSMA5P28066 241 aa19.08■□□□□ 0.64
C4A-243ENST00000428956 VPS37CA5D8V6 355 aaPredicted RBP19.07■□□□□ 0.64
C4A-243ENST00000428956 NASPP49321 788 aaPredicted RBP19.07■□□□□ 0.64
C4A-243ENST00000428956 ARHGAP5Q13017 1502 aa19.07■□□□□ 0.64
C4A-243ENST00000428956 TRAK2O60296 914 aa19.07■□□□□ 0.64
C4A-243ENST00000428956 BACH2Q9BYV9 841 aa19.07■□□□□ 0.64
C4A-243ENST00000428956 PES1O00541 588 aaKnown RBP19.07■□□□□ 0.64
C4A-243ENST00000428956 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
C4A-243ENST00000428956 WDR63Q8IWG1 891 aa19.07■□□□□ 0.64
C4A-243ENST00000428956 CDCA7LQ96GN5 454 aa19.07■□□□□ 0.64
C4A-243ENST00000428956 AMOTL1Q8IY63 956 aa19.06■□□□□ 0.64
C4A-243ENST00000428956 TEX35Q5T0J7 233 aa19.06■□□□□ 0.64
C4A-243ENST00000428956 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
C4A-243ENST00000428956 PDZRN3Q9UPQ7 1066 aa19.06■□□□□ 0.64
C4A-243ENST00000428956 G3V3G9 751 aa19.06■□□□□ 0.64
C4A-243ENST00000428956 UBTFL1P0CB47 393 aaPredicted RBP19.06■□□□□ 0.64
C4A-243ENST00000428956 DCAF8Q5TAQ9 597 aa19.06■□□□□ 0.64
C4A-243ENST00000428956 SETQ01105 290 aaPredicted RBP19.05■□□□□ 0.64
C4A-243ENST00000428956 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.648e-7■■■■■ 26.8
C4A-243ENST00000428956 CNTROBQ8N137 903 aa19.04■□□□□ 0.64
C4A-243ENST00000428956 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
C4A-243ENST00000428956 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
C4A-243ENST00000428956 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
C4A-243ENST00000428956 NAT10Q9H0A0 1025 aaKnown RBP19.04■□□□□ 0.64
C4A-243ENST00000428956 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
C4A-243ENST00000428956 ZNF592Q92610 1267 aa19.03■□□□□ 0.64
C4A-243ENST00000428956 AMER1Q5JTC6 1135 aaPredicted RBP19.03■□□□□ 0.64
C4A-243ENST00000428956 CCAR2Q8N163 923 aaKnown RBP19.03■□□□□ 0.64
C4A-243ENST00000428956 HIP1O00291 1037 aa19.03■□□□□ 0.64
C4A-243ENST00000428956 GAS2L2Q8NHY3 880 aa19.03■□□□□ 0.64
C4A-243ENST00000428956 HMOX1P09601 288 aa19.03■□□□□ 0.64
C4A-243ENST00000428956 CWC22Q9HCG8 908 aaKnown RBP19.03■□□□□ 0.64
C4A-243ENST00000428956 ARGLU1Q9NWB6 273 aaPredicted RBP19.03■□□□□ 0.64
C4A-243ENST00000428956 CCDC30Q5VVM6 783 aa19.02■□□□□ 0.64
C4A-243ENST00000428956 HOMER1Q86YM7 354 aa19.02■□□□□ 0.64
C4A-243ENST00000428956 NOL10Q9BSC4 688 aaKnown RBP19.02■□□□□ 0.64
C4A-243ENST00000428956 PDCP20941 246 aa19.02■□□□□ 0.63
C4A-243ENST00000428956 SAFBQ15424 915 aaKnown RBP eCLIP19.02■□□□□ 0.63
C4A-243ENST00000428956 TROQ12816 1431 aaPredicted RBP19.02■□□□□ 0.63
C4A-243ENST00000428956 CABP2Q9NPB3 220 aa19.01■□□□□ 0.63
C4A-243ENST00000428956 FAM13BQ9NYF5 915 aa19.01■□□□□ 0.63
C4A-243ENST00000428956 NBPF8Q3BBV2 869 aa19.01■□□□□ 0.63
C4A-243ENST00000428956 ZNF771Q7L3S4 317 aaPredicted RBP19.01■□□□□ 0.63
C4A-243ENST00000428956 CCDC173Q0VFZ6 552 aa19■□□□□ 0.63
C4A-243ENST00000428956 ERICH2A1L162 156 aa19■□□□□ 0.63
C4A-243ENST00000428956 EXOSC9Q06265 439 aaKnown RBP19■□□□□ 0.63
C4A-243ENST00000428956 AKNAQ7Z591 1439 aa19■□□□□ 0.63
C4A-243ENST00000428956 PSME1Q06323 249 aa19■□□□□ 0.63
C4A-243ENST00000428956 CLASRPQ8N2M8 674 aaKnown RBP19■□□□□ 0.63
C4A-243ENST00000428956 ZNF428Q96B54 188 aa19■□□□□ 0.63
C4A-243ENST00000428956 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
C4A-243ENST00000428956 CFAP70Q5T0N1 1121 aa18.99■□□□□ 0.63
C4A-243ENST00000428956 SUPT6HQ7KZ85 1726 aaKnown RBP18.99■□□□□ 0.63
C4A-243ENST00000428956 APPP05067 770 aa18.99■□□□□ 0.63
C4A-243ENST00000428956 NECTIN2Q92692 538 aa18.98■□□□□ 0.63
C4A-243ENST00000428956 RALYLQ86SE5 291 aaKnown RBP18.98■□□□□ 0.63
C4A-243ENST00000428956 ACBD3Q9H3P7 528 aa18.98■□□□□ 0.63
C4A-243ENST00000428956 ERC1Q8IUD2 1116 aa18.98■□□□□ 0.63
C4A-243ENST00000428956 CIZ1Q9ULV3 898 aaPredicted RBP18.97■□□□□ 0.63
C4A-243ENST00000428956 DAPK1P53355 1430 aa18.97■□□□□ 0.63
C4A-243ENST00000428956 EVA1CP58658 441 aa18.97■□□□□ 0.63
C4A-243ENST00000428956 DHX8Q14562 1220 aaKnown RBP18.97■□□□□ 0.63
C4A-243ENST00000428956 IFT57Q9NWB7 429 aa18.97■□□□□ 0.63
C4A-243ENST00000428956 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
C4A-243ENST00000428956 TWISTNBQ3B726 338 aaPredicted RBP18.97■□□□□ 0.63
C4A-243ENST00000428956 NFXL1Q6ZNB6 911 aa18.97■□□□□ 0.63
C4A-243ENST00000428956 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
C4A-243ENST00000428956 RIC3Q7Z5B4 369 aa18.96■□□□□ 0.63
C4A-243ENST00000428956 PRKAR2BP31323 418 aa18.96■□□□□ 0.63
C4A-243ENST00000428956 HMGN5P82970 282 aaKnown RBP18.95■□□□□ 0.62
C4A-243ENST00000428956 TSPY26PQ9H489 355 aa18.95■□□□□ 0.62
C4A-243ENST00000428956 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
C4A-243ENST00000428956 VPS53Q5VIR6 699 aa18.95■□□□□ 0.62
C4A-243ENST00000428956 MNS1Q8NEH6 495 aa18.95■□□□□ 0.62
C4A-243ENST00000428956 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
C4A-243ENST00000428956 GNAI2P04899 355 aa18.94■□□□□ 0.62
C4A-243ENST00000428956 MVPQ14764 893 aaKnown RBP18.94■□□□□ 0.62
C4A-243ENST00000428956 TMEM132EQ6IEE7 984 aa18.94■□□□□ 0.62
C4A-243ENST00000428956 CCT4P50991 539 aaKnown RBP18.94■□□□□ 0.62
C4A-243ENST00000428956 NEK4P51957 841 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms