RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
HMGB3P5-201ENST00000428894 MOXD2PA6NHM9 499 aa11.79□□□□□ -0.52
HMGB3P5-201ENST00000428894 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
HMGB3P5-201ENST00000428894 FCF1Q9Y324 198 aaKnown RBP11.79□□□□□ -0.52
HMGB3P5-201ENST00000428894 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
HMGB3P5-201ENST00000428894 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
HMGB3P5-201ENST00000428894 PCDHGC3Q9UN70 934 aa11.78□□□□□ -0.52
HMGB3P5-201ENST00000428894 GFRA3O60609 400 aa11.77□□□□□ -0.53
HMGB3P5-201ENST00000428894 DIXDC1Q155Q3 683 aa11.76□□□□□ -0.53
HMGB3P5-201ENST00000428894 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
HMGB3P5-201ENST00000428894 MMP16P51512 607 aa11.75□□□□□ -0.53
HMGB3P5-201ENST00000428894 ZNF598Q86UK7 904 aaKnown RBP11.74□□□□□ -0.53
HMGB3P5-201ENST00000428894 DXOO77932 396 aaKnown RBP11.73□□□□□ -0.53
HMGB3P5-201ENST00000428894 LAPTM4AQ15012 233 aa11.73□□□□□ -0.53
HMGB3P5-201ENST00000428894 RETREG3Q86VR2 466 aa11.73□□□□□ -0.53
HMGB3P5-201ENST00000428894 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
HMGB3P5-201ENST00000428894 RPIAP49247 311 aa11.71□□□□□ -0.53
HMGB3P5-201ENST00000428894 RSBN1LQ6PCB5 846 aaPredicted RBP11.71□□□□□ -0.53
HMGB3P5-201ENST00000428894 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
HMGB3P5-201ENST00000428894 SPTLC1O15269 473 aa11.69□□□□□ -0.54
HMGB3P5-201ENST00000428894 ZBTB24O43167 697 aaPredicted RBP11.69□□□□□ -0.54
HMGB3P5-201ENST00000428894 JUNDP17535 347 aa11.69□□□□□ -0.54
HMGB3P5-201ENST00000428894 GJA5P36382 358 aa11.69□□□□□ -0.54
HMGB3P5-201ENST00000428894 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
HMGB3P5-201ENST00000428894 CCDC24Q8N4L8 307 aa11.69□□□□□ -0.54
HMGB3P5-201ENST00000428894 NRG2O14511 850 aaPredicted RBP11.68□□□□□ -0.54
HMGB3P5-201ENST00000428894 CD2BP2O95400 341 aaKnown RBP11.68□□□□□ -0.54
HMGB3P5-201ENST00000428894 Q6ZNB5 142 aa11.68□□□□□ -0.54
HMGB3P5-201ENST00000428894 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
HMGB3P5-201ENST00000428894 PCDHB15Q9Y5E8 787 aa11.68□□□□□ -0.54
HMGB3P5-201ENST00000428894 MTMR2Q13614 643 aa11.67□□□□□ -0.54
HMGB3P5-201ENST00000428894 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
HMGB3P5-201ENST00000428894 MYSM1Q5VVJ2 828 aa11.66□□□□□ -0.54
HMGB3P5-201ENST00000428894 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
HMGB3P5-201ENST00000428894 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
HMGB3P5-201ENST00000428894 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.54
HMGB3P5-201ENST00000428894 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
HMGB3P5-201ENST00000428894 TNFRSF10AO00220 468 aa11.63□□□□□ -0.55
HMGB3P5-201ENST00000428894 GDF9O60383 454 aa11.63□□□□□ -0.55
HMGB3P5-201ENST00000428894 FOXC1Q12948 553 aa11.63□□□□□ -0.55
HMGB3P5-201ENST00000428894 LIMD1Q9UGP4 676 aa11.63□□□□□ -0.55
HMGB3P5-201ENST00000428894 HRCP23327 699 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 PRR20EP86478 221 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 PRR20CP86479 221 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 PRR20DP86480 221 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 PRR20BP86481 221 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 PRR20AP86496 221 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 ZBTB3Q9H5J0 574 aa11.62□□□□□ -0.55
HMGB3P5-201ENST00000428894 CABLES1Q8TDN4 633 aa11.61□□□□□ -0.55
HMGB3P5-201ENST00000428894 TRIM32Q13049 653 aa11.6□□□□□ -0.55
HMGB3P5-201ENST00000428894 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
HMGB3P5-201ENST00000428894 PKD2L1Q9P0L9 805 aa11.6□□□□□ -0.55
HMGB3P5-201ENST00000428894 FAM117AQ9C073 453 aa11.59□□□□□ -0.55
HMGB3P5-201ENST00000428894 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
HMGB3P5-201ENST00000428894 CLK2P49760 499 aaKnown RBP11.58□□□□□ -0.56
HMGB3P5-201ENST00000428894 PTPRNQ16849 979 aa11.58□□□□□ -0.56
HMGB3P5-201ENST00000428894 TUSC1Q2TAM9 212 aa11.58□□□□□ -0.56
HMGB3P5-201ENST00000428894 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
HMGB3P5-201ENST00000428894 DESI1Q6ICB0 168 aa11.58□□□□□ -0.56
HMGB3P5-201ENST00000428894 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 CFAP99D6REC4 459 aa11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 CCNYL3P0C7X3 344 aa11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 NUTM2DQ5VT03 806 aaPredicted RBP11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 PTCRAQ6ISU1 281 aaPredicted RBP11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
HMGB3P5-201ENST00000428894 QPCTQ16769 361 aa11.56□□□□□ -0.56
HMGB3P5-201ENST00000428894 TRAF7Q6Q0C0 670 aa11.56□□□□□ -0.56
HMGB3P5-201ENST00000428894 LILRB3O75022 631 aa11.55□□□□□ -0.56
HMGB3P5-201ENST00000428894 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
HMGB3P5-201ENST00000428894 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
HMGB3P5-201ENST00000428894 LYPD8Q6UX82 237 aa11.53□□□□□ -0.56
HMGB3P5-201ENST00000428894 TSC1Q92574 1164 aa11.53□□□□□ -0.56
HMGB3P5-201ENST00000428894 PLEKHG3A1L390 1219 aa11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 FAM187AA6NFU0 413 aa11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 WNT7AO00755 349 aa11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 LCE2BO14633 110 aa11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 PKDCCQ504Y2 493 aa11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 CYP4X1Q8N118 509 aa11.52□□□□□ -0.57
HMGB3P5-201ENST00000428894 DGAT1O75907 488 aa11.51□□□□□ -0.57
HMGB3P5-201ENST00000428894 SKOR1P84550 965 aa11.51□□□□□ -0.57
HMGB3P5-201ENST00000428894 SH3D19Q5HYK7 790 aa11.51□□□□□ -0.57
HMGB3P5-201ENST00000428894 ATP1B4Q9UN42 357 aaPredicted RBP11.51□□□□□ -0.57
HMGB3P5-201ENST00000428894 WNT7BP56706 349 aa11.5□□□□□ -0.57
HMGB3P5-201ENST00000428894 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
HMGB3P5-201ENST00000428894 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
HMGB3P5-201ENST00000428894 CTHP32929 405 aa11.49□□□□□ -0.57
HMGB3P5-201ENST00000428894 TOR4AQ9NXH8 423 aa11.49□□□□□ -0.57
HMGB3P5-201ENST00000428894 PROCA1Q8NCQ7 364 aaPredicted RBP11.48□□□□□ -0.57
HMGB3P5-201ENST00000428894 MRGPRX2Q96LB1 330 aa11.48□□□□□ -0.57
HMGB3P5-201ENST00000428894 TTC24A2A3L6 582 aaPredicted RBP11.47□□□□□ -0.57
HMGB3P5-201ENST00000428894 PER1O15534 1290 aaPredicted RBP11.47□□□□□ -0.57
HMGB3P5-201ENST00000428894 LINC01559Q495D7 138 aa11.46□□□□□ -0.57
HMGB3P5-201ENST00000428894 BAP1Q92560 729 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms