RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
NR1I3-209ENST00000428574 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
NR1I3-209ENST00000428574 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-209ENST00000428574 POGKQ9P215 609 aa12.45□□□□□ -0.42
NR1I3-209ENST00000428574 NPHP4O75161 1426 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-209ENST00000428574 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
NR1I3-209ENST00000428574 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
NR1I3-209ENST00000428574 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-209ENST00000428574 RALBP1Q15311 655 aa12.43□□□□□ -0.42
NR1I3-209ENST00000428574 BCANQ96GW7 911 aa12.42□□□□□ -0.42
NR1I3-209ENST00000428574 STK26Q9P289 416 aa12.42□□□□□ -0.42
NR1I3-209ENST00000428574 PTPRUQ92729 1446 aa12.42□□□□□ -0.42
NR1I3-209ENST00000428574 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
NR1I3-209ENST00000428574 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
NR1I3-209ENST00000428574 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
NR1I3-209ENST00000428574 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
NR1I3-209ENST00000428574 ATP7BP35670 1465 aa12.4□□□□□ -0.42
NR1I3-209ENST00000428574 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
NR1I3-209ENST00000428574 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
NR1I3-209ENST00000428574 NSD2O96028 1365 aa12.4□□□□□ -0.42
NR1I3-209ENST00000428574 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.43
NR1I3-209ENST00000428574 PANK3Q9H999 370 aa12.39□□□□□ -0.43
NR1I3-209ENST00000428574 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
NR1I3-209ENST00000428574 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
NR1I3-209ENST00000428574 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
NR1I3-209ENST00000428574 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
NR1I3-209ENST00000428574 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
NR1I3-209ENST00000428574 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
NR1I3-209ENST00000428574 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
NR1I3-209ENST00000428574 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
NR1I3-209ENST00000428574 WASLO00401 505 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-209ENST00000428574 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-209ENST00000428574 PLEKHH1Q9ULM0 1364 aa12.37□□□□□ -0.43
NR1I3-209ENST00000428574 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
NR1I3-209ENST00000428574 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-209ENST00000428574 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
NR1I3-209ENST00000428574 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
NR1I3-209ENST00000428574 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
NR1I3-209ENST00000428574 KCNA6P17658 529 aa12.35□□□□□ -0.43
NR1I3-209ENST00000428574 WAPLQ7Z5K2 1190 aa12.35□□□□□ -0.43
NR1I3-209ENST00000428574 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
NR1I3-209ENST00000428574 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
NR1I3-209ENST00000428574 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-209ENST00000428574 INSRP06213 1382 aa12.34□□□□□ -0.43
NR1I3-209ENST00000428574 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
NR1I3-209ENST00000428574 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
NR1I3-209ENST00000428574 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
NR1I3-209ENST00000428574 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
NR1I3-209ENST00000428574 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
NR1I3-209ENST00000428574 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
NR1I3-209ENST00000428574 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
NR1I3-209ENST00000428574 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
NR1I3-209ENST00000428574 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-209ENST00000428574 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-209ENST00000428574 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
NR1I3-209ENST00000428574 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
NR1I3-209ENST00000428574 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
NR1I3-209ENST00000428574 DCCP43146 1447 aa12.31□□□□□ -0.44
NR1I3-209ENST00000428574 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
NR1I3-209ENST00000428574 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
NR1I3-209ENST00000428574 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
NR1I3-209ENST00000428574 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
NR1I3-209ENST00000428574 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
NR1I3-209ENST00000428574 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-209ENST00000428574 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
NR1I3-209ENST00000428574 FMN2Q9NZ56 1722 aa12.29□□□□□ -0.44
NR1I3-209ENST00000428574 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
NR1I3-209ENST00000428574 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
NR1I3-209ENST00000428574 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
NR1I3-209ENST00000428574 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-209ENST00000428574 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-209ENST00000428574 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
NR1I3-209ENST00000428574 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
NR1I3-209ENST00000428574 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
NR1I3-209ENST00000428574 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
NR1I3-209ENST00000428574 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
NR1I3-209ENST00000428574 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
NR1I3-209ENST00000428574 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
NR1I3-209ENST00000428574 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
NR1I3-209ENST00000428574 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
NR1I3-209ENST00000428574 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
NR1I3-209ENST00000428574 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
NR1I3-209ENST00000428574 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
NR1I3-209ENST00000428574 USP6P35125 1406 aa12.23□□□□□ -0.45
NR1I3-209ENST00000428574 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
NR1I3-209ENST00000428574 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NR1I3-209ENST00000428574 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
NR1I3-209ENST00000428574 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
NR1I3-209ENST00000428574 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
NR1I3-209ENST00000428574 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NR1I3-209ENST00000428574 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
NR1I3-209ENST00000428574 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
NR1I3-209ENST00000428574 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NR1I3-209ENST00000428574 FYB1O15117 783 aa12.2□□□□□ -0.46
NR1I3-209ENST00000428574 HSPA2P54652 639 aa12.2□□□□□ -0.46
NR1I3-209ENST00000428574 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
NR1I3-209ENST00000428574 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NR1I3-209ENST00000428574 ACEP12821 1306 aa12.19□□□□□ -0.46
NR1I3-209ENST00000428574 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
NR1I3-209ENST00000428574 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms