RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 MORC1Q86VD1 984 aa25.37■■□□□ 1.65
SNX17-202ENST00000427123 NSD2O96028 1365 aa25.37■■□□□ 1.65
SNX17-202ENST00000427123 NGEFQ8N5V2 710 aa25.37■■□□□ 1.65
SNX17-202ENST00000427123 PTPRMP28827 1452 aa25.36■■□□□ 1.65
SNX17-202ENST00000427123 NINLQ9Y2I6 1382 aa25.36■■□□□ 1.65
SNX17-202ENST00000427123 CGNL1Q0VF96 1302 aa25.36■■□□□ 1.65
SNX17-202ENST00000427123 CCDC146Q8IYE0 955 aa25.36■■□□□ 1.65
SNX17-202ENST00000427123 SPATA31D1Q6ZQQ2 1576 aa25.35■■□□□ 1.65
SNX17-202ENST00000427123 ARHGEF40Q8TER5 1519 aa25.34■■□□□ 1.65
SNX17-202ENST00000427123 ALKQ9UM73 1620 aa25.33■■□□□ 1.65
SNX17-202ENST00000427123 SLFN5Q08AF3 891 aa25.32■■□□□ 1.64
SNX17-202ENST00000427123 FBXO31Q5XUX0 539 aaPredicted RBP25.32■■□□□ 1.64
SNX17-202ENST00000427123 YTHDC2Q9H6S0 1430 aaKnown RBP25.32■■□□□ 1.64
SNX17-202ENST00000427123 ANP32EQ9BTT0 268 aa25.32■■□□□ 1.64
SNX17-202ENST00000427123 APAF1O14727 1248 aa25.31■■□□□ 1.64
SNX17-202ENST00000427123 TRMT2AQ8IZ69 625 aaKnown RBP25.3■■□□□ 1.64
SNX17-202ENST00000427123 KIF13AQ9H1H9 1805 aa25.3■■□□□ 1.64
SNX17-202ENST00000427123 PLIN1O60240 522 aa25.29■■□□□ 1.64
SNX17-202ENST00000427123 NKTRP30414 1462 aaKnown RBP25.28■■□□□ 1.64
SNX17-202ENST00000427123 CABP2Q9NPB3 220 aa25.27■■□□□ 1.64
SNX17-202ENST00000427123 STK26Q9P289 416 aa25.27■■□□□ 1.64
SNX17-202ENST00000427123 ATAD2Q6PL18 1390 aa25.27■■□□□ 1.64
SNX17-202ENST00000427123 CRBNQ96SW2 442 aa25.26■■□□□ 1.63
SNX17-202ENST00000427123 A2ML1A8K2U0 1454 aa25.26■■□□□ 1.63
SNX17-202ENST00000427123 ANKRD26Q9UPS8 1709 aa25.26■■□□□ 1.63
SNX17-202ENST00000427123 E9PSI1 815 aa25.25■■□□□ 1.63
SNX17-202ENST00000427123 STAG3Q9UJ98 1225 aa25.25■■□□□ 1.63
SNX17-202ENST00000427123 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
SNX17-202ENST00000427123 IQSEC2Q5JU85 1478 aa25.24■■□□□ 1.63
SNX17-202ENST00000427123 SAFB2Q14151 953 aaKnown RBP eCLIP25.24■■□□□ 1.63
SNX17-202ENST00000427123 SETD1AO15047 1707 aaKnown RBP25.24■■□□□ 1.63
SNX17-202ENST00000427123 CFAP53Q96M91 514 aa25.24■■□□□ 1.63
SNX17-202ENST00000427123 A0A1W2PP64 1363 aa25.23■■□□□ 1.63
SNX17-202ENST00000427123 DLC1Q96QB1 1528 aa25.23■■□□□ 1.63
SNX17-202ENST00000427123 TNNT2P45379 298 aaPredicted RBP25.23■■□□□ 1.63
SNX17-202ENST00000427123 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.23■■□□□ 1.63
SNX17-202ENST00000427123 MSH5O43196 834 aa25.22■■□□□ 1.63
SNX17-202ENST00000427123 SRPK2P78362 688 aaKnown RBP25.22■■□□□ 1.63
SNX17-202ENST00000427123 PRAM1Q96QH2 718 aa25.22■■□□□ 1.63
SNX17-202ENST00000427123 POGKQ9P215 609 aa25.2■■□□□ 1.63
SNX17-202ENST00000427123 RIMS2Q9UQ26 1411 aa25.2■■□□□ 1.62
SNX17-202ENST00000427123 MTHFSP49914 203 aa25.2■■□□□ 1.62
SNX17-202ENST00000427123 RUNDC1Q96C34 613 aa25.19■■□□□ 1.62
SNX17-202ENST00000427123 SPINK5Q9NQ38 1064 aaPredicted RBP25.19■■□□□ 1.62
SNX17-202ENST00000427123 MED14O60244 1454 aa25.18■■□□□ 1.62
SNX17-202ENST00000427123 MINK1Q8N4C8 1332 aaPredicted RBP25.18■■□□□ 1.62
SNX17-202ENST00000427123 TCERG1O14776 1098 aaKnown RBP25.17■■□□□ 1.62
SNX17-202ENST00000427123 C20orf194Q5TEA3 1177 aa25.17■■□□□ 1.62
SNX17-202ENST00000427123 SENP3Q9H4L4 574 aaPredicted RBP25.17■■□□□ 1.62
SNX17-202ENST00000427123 CD163L1Q9NR16 1453 aa25.17■■□□□ 1.62
SNX17-202ENST00000427123 TERF2IPQ9NYB0 399 aa25.16■■□□□ 1.62
SNX17-202ENST00000427123 WWC1Q8IX03 1113 aa25.15■■□□□ 1.62
SNX17-202ENST00000427123 KIF20BQ96Q89 1820 aa25.15■■□□□ 1.62
SNX17-202ENST00000427123 ADGRB2O60241 1585 aa25.13■■□□□ 1.61
SNX17-202ENST00000427123 NRXN3Q9Y4C0 1643 aa25.13■■□□□ 1.61
SNX17-202ENST00000427123 NLRP1Q9C000 1473 aa25.12■■□□□ 1.61
SNX17-202ENST00000427123 MLECQ14165 292 aa25.12■■□□□ 1.61
SNX17-202ENST00000427123 DMRT2Q9Y5R5 561 aa25.12■■□□□ 1.61
SNX17-202ENST00000427123 NCBP3Q53F19 620 aaKnown RBP25.11■■□□□ 1.61
SNX17-202ENST00000427123 PHF23Q9BUL5 403 aaPredicted RBP25.11■■□□□ 1.61
SNX17-202ENST00000427123 MS4A1P11836 297 aa25.1■■□□□ 1.61
SNX17-202ENST00000427123 TCP11L2Q8N4U5 519 aa25.1■■□□□ 1.61
SNX17-202ENST00000427123 CDK19Q9BWU1 502 aa25.09■■□□□ 1.61
SNX17-202ENST00000427123 COL3A1P02461 1466 aaPredicted RBP25.09■■□□□ 1.61
SNX17-202ENST00000427123 CCDC27Q2M243 656 aa25.08■■□□□ 1.61
SNX17-202ENST00000427123 HDGFL2Q7Z4V5 671 aaPredicted RBP25.08■■□□□ 1.61
SNX17-202ENST00000427123 KNDC1Q76NI1 1749 aa25.08■■□□□ 1.61
SNX17-202ENST00000427123 ATP7BP35670 1465 aa25.07■■□□□ 1.6
SNX17-202ENST00000427123 ZMYM3Q14202 1370 aa25.07■■□□□ 1.6
SNX17-202ENST00000427123 WDR63Q8IWG1 891 aa25.07■■□□□ 1.6
SNX17-202ENST00000427123 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.07■■□□□ 1.6
SNX17-202ENST00000427123 KDM2BQ8NHM5 1336 aa25.06■■□□□ 1.6
SNX17-202ENST00000427123 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
SNX17-202ENST00000427123 ESF1Q9H501 851 aaKnown RBP25.06■■□□□ 1.6
SNX17-202ENST00000427123 GGNBP2Q9H3C7 697 aa25.05■■□□□ 1.6
SNX17-202ENST00000427123 FYB1O15117 783 aa25.05■■□□□ 1.6
SNX17-202ENST00000427123 CENPQQ7L2Z9 268 aaPredicted RBP25.04■■□□□ 1.6
SNX17-202ENST00000427123 RRP7AQ9Y3A4 280 aaKnown RBP25.04■■□□□ 1.6
SNX17-202ENST00000427123 U2AF1L5P0DN76 240 aaPredicted RBP25.03■■□□□ 1.6
SNX17-202ENST00000427123 U2AF1Q01081 240 aaKnown RBP eCLIP25.03■■□□□ 1.6
SNX17-202ENST00000427123 BCAR3O75815 825 aa25.03■■□□□ 1.6
SNX17-202ENST00000427123 ANP32AP39687 249 aaKnown RBP25.02■■□□□ 1.6
SNX17-202ENST00000427123 NEUROD2Q15784 382 aa25.02■■□□□ 1.6
SNX17-202ENST00000427123 TNRQ92752 1358 aa25.01■■□□□ 1.59
SNX17-202ENST00000427123 CABP1Q9NZU7 370 aa25■■□□□ 1.59
SNX17-202ENST00000427123 UBR1Q8IWV7 1749 aa25■■□□□ 1.59
SNX17-202ENST00000427123 PDE3AQ14432 1141 aa24.98■■□□□ 1.59
SNX17-202ENST00000427123 WAPLQ7Z5K2 1190 aa24.98■■□□□ 1.59
SNX17-202ENST00000427123 CPS1P31327 1500 aa24.98■■□□□ 1.59
SNX17-202ENST00000427123 TECPR2O15040 1411 aa24.98■■□□□ 1.59
SNX17-202ENST00000427123 PDE4AP27815 886 aa24.98■■□□□ 1.59
SNX17-202ENST00000427123 CDC42BPGQ6DT37 1551 aa24.97■■□□□ 1.59
SNX17-202ENST00000427123 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
SNX17-202ENST00000427123 METP08581 1390 aa24.96■■□□□ 1.59
SNX17-202ENST00000427123 HDGFP51858 240 aaKnown RBP24.96■■□□□ 1.59
SNX17-202ENST00000427123 PNPLA6Q8IY17 1366 aa24.96■■□□□ 1.59
SNX17-202ENST00000427123 BACH2Q9BYV9 841 aa24.96■■□□□ 1.59
SNX17-202ENST00000427123 MYH16Q9H6N6 1097 aa24.95■■□□□ 1.58
SNX17-202ENST00000427123 PLEKHF1Q96S99 279 aa24.93■■□□□ 1.58
SNX17-202ENST00000427123 U2SURPO15042 1029 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms